RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 U2AF1L5P0DN76 240 aaPredicted RBP25.46■■□□□ 1.67
CRAT-202ENST00000393384 U2AF1Q01081 240 aaKnown RBP eCLIP25.46■■□□□ 1.67
CRAT-202ENST00000393384 INTS5Q6P9B9 1019 aaKnown RBP25.46■■□□□ 1.67
CRAT-202ENST00000393384 VSIG10Q8N0Z9 540 aa25.46■■□□□ 1.67
CRAT-202ENST00000393384 TEFQ10587 303 aa25.44■■□□□ 1.66
CRAT-202ENST00000393384 ARFGEF1Q9Y6D6 1849 aa25.44■■□□□ 1.66
CRAT-202ENST00000393384 CYP19A1P11511 503 aaPredicted RBP25.43■■□□□ 1.66
CRAT-202ENST00000393384 TTC5Q8N0Z6 440 aa25.43■■□□□ 1.66
CRAT-202ENST00000393384 PIM2Q9P1W9 311 aa25.43■■□□□ 1.66
CRAT-202ENST00000393384 CEMIPQ8WUJ3 1361 aa25.43■■□□□ 1.66
CRAT-202ENST00000393384 USP42Q9H9J4 1324 aaKnown RBP25.42■■□□□ 1.66
CRAT-202ENST00000393384 KCNA3P22001 575 aa25.42■■□□□ 1.66
CRAT-202ENST00000393384 NMRK2Q9NPI5 230 aa25.41■■□□□ 1.66
CRAT-202ENST00000393384 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
CRAT-202ENST00000393384 FKBP8Q14318 412 aa25.4■■□□□ 1.66
CRAT-202ENST00000393384 C9orf131Q5VYM1 1079 aa25.4■■□□□ 1.66
CRAT-202ENST00000393384 SRP68Q9UHB9 627 aaKnown RBP25.4■■□□□ 1.66
CRAT-202ENST00000393384 DALRD3Q5D0E6 543 aaKnown RBP25.39■■□□□ 1.66
CRAT-202ENST00000393384 ZNF790Q6PG37 636 aa25.39■■□□□ 1.66
CRAT-202ENST00000393384 SOS1Q07889 1333 aaPredicted RBP25.38■■□□□ 1.65
CRAT-202ENST00000393384 DDR1Q08345 913 aa25.37■■□□□ 1.65
CRAT-202ENST00000393384 RBM46Q8TBY0 533 aaKnown RBP25.37■■□□□ 1.65
CRAT-202ENST00000393384 HEG1Q9ULI3 1381 aa25.36■■□□□ 1.65
CRAT-202ENST00000393384 C16orf71Q8IYS4 520 aaPredicted RBP25.36■■□□□ 1.65
CRAT-202ENST00000393384 ZNF496Q96IT1 587 aaPredicted RBP25.36■■□□□ 1.65
CRAT-202ENST00000393384 ZBTB1Q9Y2K1 713 aa25.36■■□□□ 1.65
CRAT-202ENST00000393384 RTF1Q92541 710 aaKnown RBP25.35■■□□□ 1.65
CRAT-202ENST00000393384 TEX13AQ9BXU3 409 aaPredicted RBP25.35■■□□□ 1.65
CRAT-202ENST00000393384 COL15A1P39059 1388 aa25.34■■□□□ 1.65
CRAT-202ENST00000393384 BTBD11A6QL63 1104 aa25.34■■□□□ 1.65
CRAT-202ENST00000393384 POLRMTO00411 1230 aaKnown RBP25.34■■□□□ 1.65
CRAT-202ENST00000393384 HTATSF1O43719 755 aaKnown RBP25.34■■□□□ 1.65
CRAT-202ENST00000393384 ZPR1O75312 459 aa25.34■■□□□ 1.65
CRAT-202ENST00000393384 STARD3NLO95772 234 aa25.34■■□□□ 1.65
CRAT-202ENST00000393384 DNAJC5GQ8N7S2 189 aa25.34■■□□□ 1.65
CRAT-202ENST00000393384 KDM2BQ8NHM5 1336 aa25.34■■□□□ 1.65
CRAT-202ENST00000393384 FMNL2Q96PY5 1086 aa25.33■■□□□ 1.65
CRAT-202ENST00000393384 TM4SF1P30408 202 aa25.32■■□□□ 1.64
CRAT-202ENST00000393384 RALBP1Q15311 655 aa25.32■■□□□ 1.64
CRAT-202ENST00000393384 USPL1Q5W0Q7 1092 aa25.32■■□□□ 1.64
CRAT-202ENST00000393384 RNF181Q9P0P0 153 aa25.32■■□□□ 1.64
CRAT-202ENST00000393384 NARFQ9UHQ1 456 aa25.32■■□□□ 1.64
CRAT-202ENST00000393384 AFDNP55196 1824 aaKnown RBP25.32■■□□□ 1.64
CRAT-202ENST00000393384 NEFMP07197 916 aa25.31■■□□□ 1.64
CRAT-202ENST00000393384 CHRNA5P30532 468 aa25.31■■□□□ 1.64
CRAT-202ENST00000393384 DDX10Q13206 875 aaKnown RBP25.31■■□□□ 1.64
CRAT-202ENST00000393384 MCM10Q7L590 875 aa25.31■■□□□ 1.64
CRAT-202ENST00000393384 WDR90Q96KV7 1748 aa25.3■■□□□ 1.64
CRAT-202ENST00000393384 CANXP27824 592 aaKnown RBP25.3■■□□□ 1.64
CRAT-202ENST00000393384 FSTL1Q12841 308 aa25.3■■□□□ 1.64
CRAT-202ENST00000393384 KCNQ3O43525 872 aa25.29■■□□□ 1.64
CRAT-202ENST00000393384 EIF5P55010 431 aaKnown RBP25.28■■□□□ 1.64
CRAT-202ENST00000393384 PLEKHF1Q96S99 279 aa25.28■■□□□ 1.64
CRAT-202ENST00000393384 PNNQ9H307 717 aaKnown RBP25.28■■□□□ 1.64
CRAT-202ENST00000393384 NRXN2Q9P2S2 1712 aa25.28■■□□□ 1.64
CRAT-202ENST00000393384 A0A087WZG4 1122 aa25.27■■□□□ 1.64
CRAT-202ENST00000393384 DCTN1Q14203 1278 aa25.27■■□□□ 1.64
CRAT-202ENST00000393384 SBF1O95248 1867 aa25.27■■□□□ 1.64
CRAT-202ENST00000393384 ZC3H4Q9UPT8 1303 aaKnown RBP25.26■■□□□ 1.63
CRAT-202ENST00000393384 TNRC6CQ9HCJ0 1690 aaKnown RBP25.26■■□□□ 1.63
CRAT-202ENST00000393384 BCL2L12Q9HB09 334 aa25.25■■□□□ 1.63
CRAT-202ENST00000393384 SCN7AQ01118 1682 aa25.24■■□□□ 1.63
CRAT-202ENST00000393384 IL6STP40189 918 aaPredicted RBP25.24■■□□□ 1.63
CRAT-202ENST00000393384 NFIXQ14938 502 aa25.24■■□□□ 1.63
CRAT-202ENST00000393384 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
CRAT-202ENST00000393384 KDM3BQ7LBC6 1761 aa25.23■■□□□ 1.63
CRAT-202ENST00000393384 TAF7Q15545 349 aaPredicted RBP25.23■■□□□ 1.63
CRAT-202ENST00000393384 KLRG1Q96E93 195 aa25.23■■□□□ 1.63
CRAT-202ENST00000393384 A1BGP04217 495 aa25.22■■□□□ 1.63
CRAT-202ENST00000393384 SNRPA1P09661 255 aaKnown RBP25.21■■□□□ 1.63
CRAT-202ENST00000393384 NFE2L2Q16236 605 aa25.21■■□□□ 1.63
CRAT-202ENST00000393384 USP16Q9Y5T5 823 aa25.21■■□□□ 1.63
CRAT-202ENST00000393384 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
CRAT-202ENST00000393384 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
CRAT-202ENST00000393384 MAPK8IP3Q9UPT6 1336 aa25.2■■□□□ 1.62
CRAT-202ENST00000393384 SERPINB2P05120 415 aa25.2■■□□□ 1.62
CRAT-202ENST00000393384 SMC1BQ8NDV3 1235 aa25.2■■□□□ 1.62
CRAT-202ENST00000393384 LAMB4A4D0S4 1761 aa25.2■■□□□ 1.62
CRAT-202ENST00000393384 DLEC1Q9Y238 1755 aa25.19■■□□□ 1.62
CRAT-202ENST00000393384 LMNB1P20700 586 aa25.19■■□□□ 1.62
CRAT-202ENST00000393384 HTRA3P83110 453 aa25.19■■□□□ 1.62
CRAT-202ENST00000393384 RASSF7Q02833 373 aa25.19■■□□□ 1.62
CRAT-202ENST00000393384 JMYQ8N9B5 988 aa25.19■■□□□ 1.62
CRAT-202ENST00000393384 ZNF330Q9Y3S2 320 aaPredicted RBP25.19■■□□□ 1.62
CRAT-202ENST00000393384 NPM2Q86SE8 214 aaKnown RBP25.18■■□□□ 1.62
CRAT-202ENST00000393384 TTLL6Q8N841 843 aa25.18■■□□□ 1.62
CRAT-202ENST00000393384 PNISRQ8TF01 805 aaKnown RBP25.18■■□□□ 1.62
CRAT-202ENST00000393384 PRAMEF22A3QJZ6 481 aa25.17■■□□□ 1.62
CRAT-202ENST00000393384 TBC1D2BQ9UPU7 963 aa25.17■■□□□ 1.62
CRAT-202ENST00000393384 GLTPD2A6NH11 291 aa25.15■■□□□ 1.62
CRAT-202ENST00000393384 C2CD5Q86YS7 1000 aa25.15■■□□□ 1.62
CRAT-202ENST00000393384 MIS18AQ9NYP9 233 aa25.15■■□□□ 1.62
CRAT-202ENST00000393384 H0YIN7 160 aa25.14■■□□□ 1.62
CRAT-202ENST00000393384 TBC1D9BQ66K14 1250 aa25.14■■□□□ 1.62
CRAT-202ENST00000393384 BICDL1Q6ZP65 573 aa25.14■■□□□ 1.62
CRAT-202ENST00000393384 ANKRD31Q8N7Z5 1873 aa25.13■■□□□ 1.61
CRAT-202ENST00000393384 VEGFAP15692 232 aaPredicted RBP25.13■■□□□ 1.61
CRAT-202ENST00000393384 CAMTA2O94983 1202 aa25.12■■□□□ 1.61
CRAT-202ENST00000393384 DZIP3Q86Y13 1208 aaKnown RBP25.12■■□□□ 1.61
CRAT-202ENST00000393384 PDZRN3Q9UPQ7 1066 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms