RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

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Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.55■■■□□ 2.64
SMARCD3-203ENST00000392811 POLA2Q14181 598 aa31.54■■■□□ 2.64
SMARCD3-203ENST00000392811 RBM42Q9BTD8 480 aaKnown RBP31.54■■■□□ 2.64
SMARCD3-203ENST00000392811 MX1P20591 662 aa31.54■■■□□ 2.64
SMARCD3-203ENST00000392811 TSHZ3Q63HK5 1081 aa31.54■■■□□ 2.64
SMARCD3-203ENST00000392811 SLC52A2Q9HAB3 445 aa31.54■■■□□ 2.64
SMARCD3-203ENST00000392811 CHMP5Q9NZZ3 219 aa31.54■■■□□ 2.64
SMARCD3-203ENST00000392811 TUBGCP6Q96RT7 1819 aa31.53■■■□□ 2.64
SMARCD3-203ENST00000392811 MAP3K2Q9Y2U5 619 aa31.53■■■□□ 2.64
SMARCD3-203ENST00000392811 CPDO75976 1380 aa31.52■■■□□ 2.64
SMARCD3-203ENST00000392811 CD2BP2O95400 341 aaKnown RBP31.52■■■□□ 2.64
SMARCD3-203ENST00000392811 GSE1Q14687 1217 aa31.52■■■□□ 2.64
SMARCD3-203ENST00000392811 BRINP3Q76B58 766 aa31.52■■■□□ 2.64
SMARCD3-203ENST00000392811 ZNF790Q6PG37 636 aa31.51■■■□□ 2.64
SMARCD3-203ENST00000392811 KSR2Q6VAB6 950 aa31.51■■■□□ 2.64
SMARCD3-203ENST00000392811 SLC39A6Q13433 755 aa31.51■■■□□ 2.63
SMARCD3-203ENST00000392811 HYPKQ9NX55 129 aa31.51■■■□□ 2.63
SMARCD3-203ENST00000392811 HSP90AB1P08238 724 aaKnown RBP31.5■■■□□ 2.63
SMARCD3-203ENST00000392811 IFNL2Q8IZJ0 200 aa31.5■■■□□ 2.63
SMARCD3-203ENST00000392811 SRGAP3O43295 1099 aa31.49■■■□□ 2.63
SMARCD3-203ENST00000392811 STAP2Q9UGK3 403 aa31.49■■■□□ 2.63
SMARCD3-203ENST00000392811 RAB11FIP3O75154 756 aa31.49■■■□□ 2.63
SMARCD3-203ENST00000392811 SURF6O75683 361 aaKnown RBP31.49■■■□□ 2.63
SMARCD3-203ENST00000392811 NFATC2IPQ8NCF5 419 aa31.49■■■□□ 2.63
SMARCD3-203ENST00000392811 DDX21Q9NR30 783 aaKnown RBP eCLIP31.48■■■□□ 2.63
SMARCD3-203ENST00000392811 PLEKHG2Q9H7P9 1386 aa31.48■■■□□ 2.63
SMARCD3-203ENST00000392811 ALDH1L1O75891 902 aa31.48■■■□□ 2.63
SMARCD3-203ENST00000392811 DDIT3P35638 169 aa31.48■■■□□ 2.63
SMARCD3-203ENST00000392811 STRCQ7RTU9 1775 aa31.47■■■□□ 2.63
SMARCD3-203ENST00000392811 C5P01031 1676 aa31.47■■■□□ 2.63
SMARCD3-203ENST00000392811 IL1RAPL2Q9NP60 686 aa31.47■■■□□ 2.63
SMARCD3-203ENST00000392811 PKD1L3Q7Z443 1732 aa31.46■■■□□ 2.63
SMARCD3-203ENST00000392811 ERC2O15083 957 aa31.46■■■□□ 2.63
SMARCD3-203ENST00000392811 K7ELQ4 463 aaPredicted RBP31.46■■■□□ 2.63
SMARCD3-203ENST00000392811 REC8O95072 547 aa31.46■■■□□ 2.63
SMARCD3-203ENST00000392811 PDIA6Q15084 440 aa31.46■■■□□ 2.63
SMARCD3-203ENST00000392811 CYP27B1O15528 508 aa31.45■■■□□ 2.63
SMARCD3-203ENST00000392811 RABEP1Q15276 862 aa31.45■■■□□ 2.63
SMARCD3-203ENST00000392811 DCAF5Q96JK2 942 aa31.44■■■□□ 2.62
SMARCD3-203ENST00000392811 MRC1P22897 1456 aa31.44■■■□□ 2.62
SMARCD3-203ENST00000392811 AOX1Q06278 1338 aa31.43■■■□□ 2.62
SMARCD3-203ENST00000392811 RHPN1Q8TCX5 695 aa31.43■■■□□ 2.62
SMARCD3-203ENST00000392811 CWF19L2Q2TBE0 894 aaKnown RBP31.42■■■□□ 2.62
SMARCD3-203ENST00000392811 C9orf78Q9NZ63 289 aaPredicted RBP31.42■■■□□ 2.62
SMARCD3-203ENST00000392811 DDX58O95786 925 aaKnown RBP31.42■■■□□ 2.62
SMARCD3-203ENST00000392811 AIMP1Q12904 312 aaKnown RBP31.41■■■□□ 2.62
SMARCD3-203ENST00000392811 MTX1Q13505 466 aa31.41■■■□□ 2.62
SMARCD3-203ENST00000392811 NUTM1Q86Y26 1132 aa31.41■■■□□ 2.62
SMARCD3-203ENST00000392811 KIF1BPQ96EK5 621 aa31.41■■■□□ 2.62
SMARCD3-203ENST00000392811 LINS1Q8NG48 757 aa31.4■■■□□ 2.62
SMARCD3-203ENST00000392811 ZNF496Q96IT1 587 aaPredicted RBP31.4■■■□□ 2.62
SMARCD3-203ENST00000392811 TRIM6-TRIM34B2RNG4 842 aa31.39■■■□□ 2.62
SMARCD3-203ENST00000392811 RILPL2Q969X0 211 aa31.39■■■□□ 2.62
SMARCD3-203ENST00000392811 SLAIN2Q9P270 581 aa31.38■■■□□ 2.61
SMARCD3-203ENST00000392811 SOS2Q07890 1332 aaPredicted RBP31.38■■■□□ 2.61
SMARCD3-203ENST00000392811 ZNF335Q9H4Z2 1342 aaPredicted RBP31.38■■■□□ 2.61
SMARCD3-203ENST00000392811 HSP90AB4PQ58FF6 505 aa31.37■■■□□ 2.61
SMARCD3-203ENST00000392811 ESYT1Q9BSJ8 1104 aa31.37■■■□□ 2.61
SMARCD3-203ENST00000392811 MCM4P33991 863 aa31.37■■■□□ 2.61
SMARCD3-203ENST00000392811 PRDM11Q9NQV5 511 aa31.37■■■□□ 2.61
SMARCD3-203ENST00000392811 CIZ1Q9ULV3 898 aaPredicted RBP31.37■■■□□ 2.61
SMARCD3-203ENST00000392811 HSP90AA1P07900 732 aaKnown RBP31.36■■■□□ 2.61
SMARCD3-203ENST00000392811 CHMLP26374 656 aa31.36■■■□□ 2.61
SMARCD3-203ENST00000392811 UNC5CLQ8IV45 518 aa31.36■■■□□ 2.61
SMARCD3-203ENST00000392811 MYL6BP14649 208 aa31.36■■■□□ 2.61
SMARCD3-203ENST00000392811 TTC5Q8N0Z6 440 aa31.36■■■□□ 2.61
SMARCD3-203ENST00000392811 HDAC5Q9UQL6 1122 aa31.36■■■□□ 2.61
SMARCD3-203ENST00000392811 KDM4FA0A1W2PPD8 638 aa31.35■■■□□ 2.61
SMARCD3-203ENST00000392811 GRM8O00222 908 aa31.34■■■□□ 2.61
SMARCD3-203ENST00000392811 FOXD4L1Q9NU39 408 aa31.34■■■□□ 2.61
SMARCD3-203ENST00000392811 UTYO14607 1347 aa31.34■■■□□ 2.61
SMARCD3-203ENST00000392811 WDR17Q8IZU2 1322 aa31.34■■■□□ 2.61
SMARCD3-203ENST00000392811 SNRPA1P09661 255 aaKnown RBP31.34■■■□□ 2.61
SMARCD3-203ENST00000392811 RIC3Q7Z5B4 369 aa31.34■■■□□ 2.61
SMARCD3-203ENST00000392811 PARP4Q9UKK3 1724 aaKnown RBP31.32■■■□□ 2.61
SMARCD3-203ENST00000392811 CABP4P57796 275 aa31.32■■■□□ 2.61
SMARCD3-203ENST00000392811 PI4K2BQ8TCG2 481 aa31.32■■■□□ 2.61
SMARCD3-203ENST00000392811 XAGE3Q8WTP9 111 aa31.32■■■□□ 2.61
SMARCD3-203ENST00000392811 LARP1Q6PKG0 1096 aaKnown RBP31.32■■■□□ 2.6
SMARCD3-203ENST00000392811 FMNL2Q96PY5 1086 aa31.32■■■□□ 2.6
SMARCD3-203ENST00000392811 USP16Q9Y5T5 823 aa31.32■■■□□ 2.6
SMARCD3-203ENST00000392811 IGKV5-2P06315 115 aa31.31■■■□□ 2.6
SMARCD3-203ENST00000392811 OS9Q13438 667 aaPredicted RBP31.31■■■□□ 2.6
SMARCD3-203ENST00000392811 SUCLG2Q96I99 432 aa31.31■■■□□ 2.6
SMARCD3-203ENST00000392811 COPS6Q7L5N1 327 aa31.31■■■□□ 2.6
SMARCD3-203ENST00000392811 TOM1L2Q6ZVM7 507 aa31.3■■■□□ 2.6
SMARCD3-203ENST00000392811 KAZALD1Q96I82 304 aa31.3■■■□□ 2.6
SMARCD3-203ENST00000392811 COL5A2P05997 1499 aaPredicted RBP31.29■■■□□ 2.6
SMARCD3-203ENST00000392811 LRP10Q7Z4F1 713 aa31.29■■■□□ 2.6
SMARCD3-203ENST00000392811 PA2G4Q9UQ80 394 aaKnown RBP31.27■■■□□ 2.6
SMARCD3-203ENST00000392811 ABCA3Q99758 1704 aa31.27■■■□□ 2.6
SMARCD3-203ENST00000392811 NEXNQ0ZGT2 675 aa31.27■■■□□ 2.6
SMARCD3-203ENST00000392811 RAB3GAP1Q15042 981 aa31.27■■■□□ 2.6
SMARCD3-203ENST00000392811 BICC1Q9H694 974 aaKnown RBP31.27■■■□□ 2.6
SMARCD3-203ENST00000392811 USP42Q9H9J4 1324 aaKnown RBP31.26■■■□□ 2.6
SMARCD3-203ENST00000392811 NEURL1BA8MQ27 555 aa31.26■■■□□ 2.59
SMARCD3-203ENST00000392811 ST18O60284 1047 aa31.26■■■□□ 2.59
SMARCD3-203ENST00000392811 MAP4K4O95819 1239 aaPredicted RBP31.26■■■□□ 2.59
SMARCD3-203ENST00000392811 ZCRB1Q8TBF4 217 aaKnown RBP31.26■■■□□ 2.59
SMARCD3-203ENST00000392811 TNPO1Q92973 898 aaKnown RBP31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms