RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 RFC4P35249 363 aa14.6□□□□□ -0.07
TRAF3IP2-208ENST00000392556 CALD1Q05682 793 aaKnown RBP14.6□□□□□ -0.07
TRAF3IP2-208ENST00000392556 AEBP1Q8IUX7 1158 aa14.6□□□□□ -0.07
TRAF3IP2-208ENST00000392556 CCDC87Q9NVE4 849 aa14.6□□□□□ -0.07
TRAF3IP2-208ENST00000392556 COL5A3P25940 1745 aaPredicted RBP14.59□□□□□ -0.07
TRAF3IP2-208ENST00000392556 ARHGEF1Q92888 912 aaKnown RBP14.59□□□□□ -0.07
TRAF3IP2-208ENST00000392556 SLC4A9Q96Q91 983 aa14.59□□□□□ -0.07
TRAF3IP2-208ENST00000392556 PER1O15534 1290 aaPredicted RBP14.58□□□□□ -0.07
TRAF3IP2-208ENST00000392556 NFATC2IPQ8NCF5 419 aa14.58□□□□□ -0.07
TRAF3IP2-208ENST00000392556 CLCN1P35523 988 aa14.58□□□□□ -0.08
TRAF3IP2-208ENST00000392556 ADCY9O60503 1353 aa14.58□□□□□ -0.08
TRAF3IP2-208ENST00000392556 C10orf71Q711Q0 1435 aa14.58□□□□□ -0.08
TRAF3IP2-208ENST00000392556 DIAPH1O60610 1272 aaKnown RBP14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 NAP1L5Q96NT1 182 aaPredicted RBP14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 SLC52A2Q9HAB3 445 aa14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 NUDCQ9Y266 331 aa14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 PARP3Q9Y6F1 533 aa14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 MRC1P22897 1456 aa14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 GYS1P13807 737 aa14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 PNNQ9H307 717 aaKnown RBP14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 ATP10DQ9P241 1426 aa14.57□□□□□ -0.08
TRAF3IP2-208ENST00000392556 KIF13BQ9NQT8 1826 aa14.56□□□□□ -0.08
TRAF3IP2-208ENST00000392556 L1TD1Q5T7N2 865 aaKnown RBP14.56□□□□□ -0.08
TRAF3IP2-208ENST00000392556 SENP3-EIF4A1A0A087X0R7 540 aa14.56□□□□□ -0.08
TRAF3IP2-208ENST00000392556 CRKLP46109 303 aaKnown RBP14.56□□□□□ -0.08
TRAF3IP2-208ENST00000392556 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
TRAF3IP2-208ENST00000392556 SCN11AQ9UI33 1791 aa14.55□□□□□ -0.08
TRAF3IP2-208ENST00000392556 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
TRAF3IP2-208ENST00000392556 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
TRAF3IP2-208ENST00000392556 PRDM4Q9UKN5 801 aa14.55□□□□□ -0.08
TRAF3IP2-208ENST00000392556 PXDNLA1KZ92 1463 aa14.55□□□□□ -0.08
TRAF3IP2-208ENST00000392556 RNMTO43148 476 aaKnown RBP14.54□□□□□ -0.08
TRAF3IP2-208ENST00000392556 SMIM5Q71RC9 77 aa14.54□□□□□ -0.08
TRAF3IP2-208ENST00000392556 GPBP1L1Q9HC44 474 aaPredicted RBP14.54□□□□□ -0.08
TRAF3IP2-208ENST00000392556 C4AP0C0L4 1744 aa14.54□□□□□ -0.08
TRAF3IP2-208ENST00000392556 USP42Q9H9J4 1324 aaKnown RBP14.54□□□□□ -0.08
TRAF3IP2-208ENST00000392556 PDCL3Q9H2J4 239 aa14.53□□□□□ -0.08
TRAF3IP2-208ENST00000392556 ADAMTS7Q9UKP4 1686 aa14.52□□□□□ -0.08
TRAF3IP2-208ENST00000392556 CCDC184Q52MB2 194 aa14.52□□□□□ -0.08
TRAF3IP2-208ENST00000392556 GAS2L2Q8NHY3 880 aa14.52□□□□□ -0.08
TRAF3IP2-208ENST00000392556 TJP1Q07157 1748 aa14.51□□□□□ -0.09
TRAF3IP2-208ENST00000392556 ZPR1O75312 459 aa14.51□□□□□ -0.09
TRAF3IP2-208ENST00000392556 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
TRAF3IP2-208ENST00000392556 HMOX1P09601 288 aa14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 MTHFSDQ2M296 383 aaKnown RBP14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 CC2D1BQ5T0F9 858 aaKnown RBP14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 TEX13AQ9BXU3 409 aaPredicted RBP14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 SOS1Q07889 1333 aaPredicted RBP14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 LGR6Q9HBX8 967 aa14.5□□□□□ -0.09
TRAF3IP2-208ENST00000392556 CYP19A1P11511 503 aaPredicted RBP14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 DNAJC10Q8IXB1 793 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 PIM2Q9P1W9 311 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 MYH14Q7Z406 1995 aaKnown RBP14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 KIAA1551Q9HCM1 1747 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 A0A087WZG4 1122 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 TTC5Q8N0Z6 440 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 NARFQ9UHQ1 456 aa14.49□□□□□ -0.09
TRAF3IP2-208ENST00000392556 A0A0G2JLW4 131 aa14.48□□□□□ -0.09
TRAF3IP2-208ENST00000392556 STARD3NLO95772 234 aa14.48□□□□□ -0.09
TRAF3IP2-208ENST00000392556 DPEP1P16444 411 aa14.48□□□□□ -0.09
TRAF3IP2-208ENST00000392556 TM4SF1P30408 202 aa14.48□□□□□ -0.09
TRAF3IP2-208ENST00000392556 KCPQ6ZWJ8 1503 aa14.48□□□□□ -0.09
TRAF3IP2-208ENST00000392556 GNAT3A8MTJ3 354 aa14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 FRAT2O75474 233 aaPredicted RBP14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 FCHSD2O94868 740 aa14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 MRS2Q9HD23 443 aa14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 TPM2P07951 284 aa14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 TEFQ10587 303 aa14.47□□□□□ -0.09
TRAF3IP2-208ENST00000392556 POLRMTO00411 1230 aaKnown RBP14.46□□□□□ -0.09
TRAF3IP2-208ENST00000392556 DALRD3Q5D0E6 543 aaKnown RBP14.46□□□□□ -0.09
TRAF3IP2-208ENST00000392556 SRP68Q9UHB9 627 aaKnown RBP14.46□□□□□ -0.09
TRAF3IP2-208ENST00000392556 PDZRN3Q9UPQ7 1066 aa14.46□□□□□ -0.09
TRAF3IP2-208ENST00000392556 COL15A1P39059 1388 aa14.46□□□□□ -0.09
TRAF3IP2-208ENST00000392556 U2SURPO15042 1029 aaKnown RBP14.46□□□□□ -0.1
TRAF3IP2-208ENST00000392556 DDR1Q08345 913 aa14.45□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ARHGAP27Q6ZUM4 889 aa14.45□□□□□ -0.1
TRAF3IP2-208ENST00000392556 KCNA3P22001 575 aa14.44□□□□□ -0.1
TRAF3IP2-208ENST00000392556 SLC39A6Q13433 755 aa14.44□□□□□ -0.1
TRAF3IP2-208ENST00000392556 USPL1Q5W0Q7 1092 aa14.44□□□□□ -0.1
TRAF3IP2-208ENST00000392556 UBR2Q8IWV8 1755 aa14.44□□□□□ -0.1
TRAF3IP2-208ENST00000392556 HSPA6P17066 643 aa14.44□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ZNF790Q6PG37 636 aa14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ZBTB1Q9Y2K1 713 aa14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ARFGEF1Q9Y6D6 1849 aa14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 N4BP2Q86UW6 1770 aaPredicted RBP14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 BRCA1P38398 1863 aaKnown RBP14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 ZC3H4Q9UPT8 1303 aaKnown RBP14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 CEMIPQ8WUJ3 1361 aa14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 HEG1Q9ULI3 1381 aa14.43□□□□□ -0.1
TRAF3IP2-208ENST00000392556 KIF3CO14782 793 aa14.42□□□□□ -0.1
TRAF3IP2-208ENST00000392556 EIF5P55010 431 aaKnown RBP14.42□□□□□ -0.1
TRAF3IP2-208ENST00000392556 FMNL2Q96PY5 1086 aa14.42□□□□□ -0.1
TRAF3IP2-208ENST00000392556 WWC3Q9ULE0 1092 aa14.42□□□□□ -0.1
TRAF3IP2-208ENST00000392556 IL6STP40189 918 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms