RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 SURF6O75683 361 aaKnown RBP15.02■□□□□ -0
RFC5-201ENST00000392542 GCP02774 474 aa15.02■□□□□ -0
RFC5-201ENST00000392542 MCM2P49736 904 aa15.02■□□□□ -0
RFC5-201ENST00000392542 KLHL40Q2TBA0 621 aa15.02■□□□□ -0
RFC5-201ENST00000392542 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
RFC5-201ENST00000392542 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
RFC5-201ENST00000392542 PI4KAP1Q8N8J0 262 aa15.02■□□□□ -0
RFC5-201ENST00000392542 NEK4P51957 841 aa15.02□□□□□ -0.01
RFC5-201ENST00000392542 ADAMTSL3P82987 1691 aa15.02□□□□□ -0.01
RFC5-201ENST00000392542 ADCY9O60503 1353 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 NBPF7P0C2Y1 421 aaPredicted RBP15.01□□□□□ -0.01
RFC5-201ENST00000392542 PKP1Q13835 747 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 GAS2L3Q86XJ1 694 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 RHPN1Q8TCX5 695 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 IL17RAQ96F46 866 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 ORAI2Q96SN7 254 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 ANO2Q9NQ90 1003 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 TRPM3Q9HCF6 1732 aaPredicted RBP15.01□□□□□ -0.01
RFC5-201ENST00000392542 SRGAP3O43295 1099 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 EPB41L2O43491 1005 aaKnown RBP15.01□□□□□ -0.01
RFC5-201ENST00000392542 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 MCTP1Q6DN14 999 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 KIF1BPQ96EK5 621 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 PALD1Q9ULE6 856 aa15.01□□□□□ -0.01
RFC5-201ENST00000392542 DDX49Q9Y6V7 483 aaKnown RBP15.01□□□□□ -0.01
RFC5-201ENST00000392542 ANKRD24Q8TF21 1146 aa15□□□□□ -0.01
RFC5-201ENST00000392542 TMX3Q96JJ7 454 aa15□□□□□ -0.01
RFC5-201ENST00000392542 DBF4Q9UBU7 674 aaPredicted RBP15□□□□□ -0.01
RFC5-201ENST00000392542 SIPA1L3O60292 1781 aaPredicted RBP14.99□□□□□ -0.01
RFC5-201ENST00000392542 ANXA1P04083 346 aa14.99□□□□□ -0.01
RFC5-201ENST00000392542 PI4K2BQ8TCG2 481 aa14.99□□□□□ -0.01
RFC5-201ENST00000392542 RRAGDQ9NQL2 400 aaPredicted RBP14.99□□□□□ -0.01
RFC5-201ENST00000392542 XPCQ01831 940 aaPredicted RBP14.98□□□□□ -0.01
RFC5-201ENST00000392542 HSP90AB4PQ58FF6 505 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 ZDHHC9Q9Y397 364 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 LMTK3Q96Q04 1460 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 HEG1Q9ULI3 1381 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 CUL4AQ13619 759 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 LMBRD1Q9NUN5 540 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 KIF1AQ12756 1690 aa14.98□□□□□ -0.01
RFC5-201ENST00000392542 CRYBG1Q9Y4K1 1723 aa14.97□□□□□ -0.01
RFC5-201ENST00000392542 ADAMTS7Q9UKP4 1686 aa14.97□□□□□ -0.01
RFC5-201ENST00000392542 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
RFC5-201ENST00000392542 ALDH1L1O75891 902 aa14.97□□□□□ -0.01
RFC5-201ENST00000392542 MTX1Q13505 466 aa14.97□□□□□ -0.01
RFC5-201ENST00000392542 USP42Q9H9J4 1324 aaKnown RBP14.96□□□□□ -0.01
RFC5-201ENST00000392542 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
RFC5-201ENST00000392542 IL25Q9H293 177 aa14.96□□□□□ -0.01
RFC5-201ENST00000392542 RGPD5Q99666 1765 aa14.96□□□□□ -0.02
RFC5-201ENST00000392542 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 MAP4K4O95819 1239 aaPredicted RBP14.95□□□□□ -0.02
RFC5-201ENST00000392542 HSPA4P34932 840 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 KSR2Q6VAB6 950 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 CNTROBQ8N137 903 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 INTS4Q96HW7 963 aaKnown RBP14.95□□□□□ -0.02
RFC5-201ENST00000392542 MAP3K2Q9Y2U5 619 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 AXIN2Q9Y2T1 843 aa14.95□□□□□ -0.02
RFC5-201ENST00000392542 SGSM2O43147 1006 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 PROSER3Q2NL68 480 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 MST1RQ04912 1400 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 TTC41PQ6P2S7 1318 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 ZNF445P59923 1031 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 C9orf78Q9NZ63 289 aaPredicted RBP14.94□□□□□ -0.02
RFC5-201ENST00000392542 HDAC5Q9UQL6 1122 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 RAD50Q92878 1312 aa14.94□□□□□ -0.02
RFC5-201ENST00000392542 C1orf167Q5SNV9 1468 aa14.93□□□□□ -0.02
RFC5-201ENST00000392542 OS9Q13438 667 aaPredicted RBP14.93□□□□□ -0.02
RFC5-201ENST00000392542 HYPKQ9NX55 129 aa14.93□□□□□ -0.02
RFC5-201ENST00000392542 ALS2Q96Q42 1657 aa14.93□□□□□ -0.02
RFC5-201ENST00000392542 BRD1O95696 1058 aa14.93□□□□□ -0.02
RFC5-201ENST00000392542 PRAMEF22A3QJZ6 481 aa14.92□□□□□ -0.02
RFC5-201ENST00000392542 PRPF40AO75400 957 aaKnown RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 GLRX3O76003 335 aaKnown RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 CAVIN1Q6NZI2 390 aaKnown RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 UPF3BQ9BZI7 483 aaKnown RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 PROSER2Q86WR7 435 aaPredicted RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 LSG1Q9H089 658 aaKnown RBP14.92□□□□□ -0.02
RFC5-201ENST00000392542 ERBB3P21860 1342 aa14.91□□□□□ -0.02
RFC5-201ENST00000392542 ZSCAN23Q3MJ62 389 aa14.91□□□□□ -0.02
RFC5-201ENST00000392542 NOL8Q76FK4 1167 aaKnown RBP14.91□□□□□ -0.02
RFC5-201ENST00000392542 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
RFC5-201ENST00000392542 CLASRPQ8N2M8 674 aaKnown RBP14.91□□□□□ -0.02
RFC5-201ENST00000392542 DDX21Q9NR30 783 aaKnown RBP eCLIP14.91□□□□□ -0.02
RFC5-201ENST00000392542 SCN11AQ9UI33 1791 aa14.91□□□□□ -0.02
RFC5-201ENST00000392542 CWF19L2Q2TBE0 894 aaKnown RBP14.91□□□□□ -0.02
RFC5-201ENST00000392542 LINS1Q8NG48 757 aa14.91□□□□□ -0.02
RFC5-201ENST00000392542 GPT2Q8TD30 523 aa14.91□□□□□ -0.02
RFC5-201ENST00000392542 DDX58O95786 925 aaKnown RBP14.9□□□□□ -0.02
RFC5-201ENST00000392542 UTYO14607 1347 aa14.9□□□□□ -0.02
RFC5-201ENST00000392542 CLCN1P35523 988 aa14.9□□□□□ -0.02
RFC5-201ENST00000392542 NASPP49321 788 aaPredicted RBP14.9□□□□□ -0.02
RFC5-201ENST00000392542 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
RFC5-201ENST00000392542 C5P01031 1676 aa14.89□□□□□ -0.03
RFC5-201ENST00000392542 FOXD4L5Q5VV16 416 aaPredicted RBP14.89□□□□□ -0.03
RFC5-201ENST00000392542 FOXD4L4Q8WXT5 416 aaPredicted RBP14.89□□□□□ -0.03
RFC5-201ENST00000392542 GPATCH3Q96I76 525 aa14.89□□□□□ -0.03
RFC5-201ENST00000392542 ANO8Q9HCE9 1232 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms