RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 ANXA1P04083 346 aa26.71■■□□□ 1.87
SPHK1-202ENST00000392496 SNRPA1P09661 255 aaKnown RBP26.71■■□□□ 1.87
SPHK1-202ENST00000392496 ANP32AP39687 249 aaKnown RBP26.71■■□□□ 1.87
SPHK1-202ENST00000392496 SRCIN1Q9C0H9 1055 aa26.71■■□□□ 1.87
SPHK1-202ENST00000392496 ANKRD45Q5TZF3 282 aa26.7■■□□□ 1.86
SPHK1-202ENST00000392496 ADCY9O60503 1353 aa26.7■■□□□ 1.86
SPHK1-202ENST00000392496 PI4KAP2A4QPH2 592 aa26.69■■□□□ 1.86
SPHK1-202ENST00000392496 HMMRO75330 724 aa26.69■■□□□ 1.86
SPHK1-202ENST00000392496 PI4KAP1Q8N8J0 262 aa26.69■■□□□ 1.86
SPHK1-202ENST00000392496 DDX54Q8TDD1 881 aaKnown RBP26.69■■□□□ 1.86
SPHK1-202ENST00000392496 LNPKQ9C0E8 428 aa26.69■■□□□ 1.86
SPHK1-202ENST00000392496 PROSER3Q2NL68 480 aa26.69■■□□□ 1.86
SPHK1-202ENST00000392496 USP35Q9P2H5 1018 aa26.69■■□□□ 1.86
SPHK1-202ENST00000392496 PAPPAQ13219 1627 aa26.68■■□□□ 1.86
SPHK1-202ENST00000392496 PDIA6Q15084 440 aa26.68■■□□□ 1.86
SPHK1-202ENST00000392496 UBR2Q8IWV8 1755 aa26.68■■□□□ 1.86
SPHK1-202ENST00000392496 GLI3P10071 1580 aa26.67■■□□□ 1.86
SPHK1-202ENST00000392496 BEND3Q5T5X7 828 aa26.67■■□□□ 1.86
SPHK1-202ENST00000392496 KSR2Q6VAB6 950 aa26.67■■□□□ 1.86
SPHK1-202ENST00000392496 USP44Q9H0E7 712 aa26.67■■□□□ 1.86
SPHK1-202ENST00000392496 LAMB4A4D0S4 1761 aa26.67■■□□□ 1.86
SPHK1-202ENST00000392496 LRP6O75581 1613 aa26.66■■□□□ 1.86
SPHK1-202ENST00000392496 NRAPQ86VF7 1730 aa26.66■■□□□ 1.86
SPHK1-202ENST00000392496 WNK3Q9BYP7 1800 aa26.66■■□□□ 1.86
SPHK1-202ENST00000392496 DDX58O95786 925 aaKnown RBP26.65■■□□□ 1.86
SPHK1-202ENST00000392496 TOGARAM1Q9Y4F4 1720 aa26.65■■□□□ 1.86
SPHK1-202ENST00000392496 UBTFL1P0CB47 393 aaPredicted RBP26.63■■□□□ 1.85
SPHK1-202ENST00000392496 MAP3K2Q9Y2U5 619 aa26.63■■□□□ 1.85
SPHK1-202ENST00000392496 ALDH1L1O75891 902 aa26.62■■□□□ 1.85
SPHK1-202ENST00000392496 USP16Q9Y5T5 823 aa26.62■■□□□ 1.85
SPHK1-202ENST00000392496 ATP8B2P98198 1209 aa26.61■■□□□ 1.85
SPHK1-202ENST00000392496 FNBP4Q8N3X1 1017 aaPredicted RBP26.61■■□□□ 1.85
SPHK1-202ENST00000392496 KCPQ6ZWJ8 1503 aa26.61■■□□□ 1.85
SPHK1-202ENST00000392496 TNS2Q63HR2 1409 aa26.61■■□□□ 1.85
SPHK1-202ENST00000392496 LRRFIP2Q9Y608 721 aaKnown RBP26.61■■□□□ 1.85
SPHK1-202ENST00000392496 NWD2Q9ULI1 1742 aa26.6■■□□□ 1.85
SPHK1-202ENST00000392496 USP21Q9UK80 565 aa26.6■■□□□ 1.85
SPHK1-202ENST00000392496 ERBB4Q15303 1308 aa26.6■■□□□ 1.85
SPHK1-202ENST00000392496 NPM2Q86SE8 214 aaKnown RBP26.59■■□□□ 1.85
SPHK1-202ENST00000392496 CDCA7Q9BWT1 371 aaPredicted RBP26.59■■□□□ 1.85
SPHK1-202ENST00000392496 ZBTB47Q9UFB7 747 aaPredicted RBP26.59■■□□□ 1.85
SPHK1-202ENST00000392496 UNC5CLQ8IV45 518 aa26.58■■□□□ 1.85
SPHK1-202ENST00000392496 THRAP3Q9Y2W1 955 aaKnown RBP26.58■■□□□ 1.85
SPHK1-202ENST00000392496 IBTKQ9P2D0 1353 aaPredicted RBP26.58■■□□□ 1.85
SPHK1-202ENST00000392496 ZNF772Q68DY9 489 aaPredicted RBP26.58■■□□□ 1.85
SPHK1-202ENST00000392496 LRP10Q7Z4F1 713 aa26.58■■□□□ 1.85
SPHK1-202ENST00000392496 TMOD3Q9NYL9 352 aa26.58■■□□□ 1.85
SPHK1-202ENST00000392496 AFF2P51816 1311 aa26.58■■□□□ 1.85
SPHK1-202ENST00000392496 SLIT2O94813 1529 aa26.57■■□□□ 1.84
SPHK1-202ENST00000392496 EXOC5O00471 708 aa26.56■■□□□ 1.84
SPHK1-202ENST00000392496 MYL6BP14649 208 aa26.56■■□□□ 1.84
SPHK1-202ENST00000392496 LINS1Q8NG48 757 aa26.56■■□□□ 1.84
SPHK1-202ENST00000392496 IPO9Q96P70 1041 aaKnown RBP26.56■■□□□ 1.84
SPHK1-202ENST00000392496 SPATA31A1Q5TZJ5 1347 aa26.56■■□□□ 1.84
SPHK1-202ENST00000392496 AIMP1Q12904 312 aaKnown RBP26.56■■□□□ 1.84
SPHK1-202ENST00000392496 XAGE3Q8WTP9 111 aa26.56■■□□□ 1.84
SPHK1-202ENST00000392496 CCDC9Q9Y3X0 531 aaKnown RBP26.56■■□□□ 1.84
SPHK1-202ENST00000392496 BMP2KLQ5H9B9 411 aa26.55■■□□□ 1.84
SPHK1-202ENST00000392496 ITGB4P16144 1822 aa26.54■■□□□ 1.84
SPHK1-202ENST00000392496 COPS6Q7L5N1 327 aa26.54■■□□□ 1.84
SPHK1-202ENST00000392496 RIC3Q7Z5B4 369 aa26.54■■□□□ 1.84
SPHK1-202ENST00000392496 HDAC5Q9UQL6 1122 aa26.54■■□□□ 1.84
SPHK1-202ENST00000392496 PNMA6EA0A0J9YXQ4 647 aa26.53■■□□□ 1.84
SPHK1-202ENST00000392496 NBPF7P0C2Y1 421 aaPredicted RBP26.53■■□□□ 1.84
SPHK1-202ENST00000392496 MSH5O43196 834 aa26.53■■□□□ 1.84
SPHK1-202ENST00000392496 SSH3Q8TE77 659 aa26.53■■□□□ 1.84
SPHK1-202ENST00000392496 TRPC5Q9UL62 973 aaPredicted RBP26.52■■□□□ 1.84
SPHK1-202ENST00000392496 ANKRD13DQ6ZTN6 518 aa26.51■■□□□ 1.83
SPHK1-202ENST00000392496 PLEKHM2Q8IWE5 1019 aa26.51■■□□□ 1.83
SPHK1-202ENST00000392496 METTL22Q9BUU2 404 aaPredicted RBP26.51■■□□□ 1.83
SPHK1-202ENST00000392496 C9orf78Q9NZ63 289 aaPredicted RBP26.51■■□□□ 1.83
SPHK1-202ENST00000392496 UTYO14607 1347 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 SPATA31A5Q5VU36 1347 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 SPATA31A7Q8IWB4 1347 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 SEC24BO95487 1268 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 NEXNQ0ZGT2 675 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 POLA2Q14181 598 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 PIGBQ92521 554 aa26.5■■□□□ 1.83
SPHK1-202ENST00000392496 VPS72Q15906 364 aa26.49■■□□□ 1.83
SPHK1-202ENST00000392496 CWF19L2Q2TBE0 894 aaKnown RBP26.49■■□□□ 1.83
SPHK1-202ENST00000392496 BCL9LQ86UU0 1499 aa26.49■■□□□ 1.83
SPHK1-202ENST00000392496 PTCD1O75127 700 aaKnown RBP26.48■■□□□ 1.83
SPHK1-202ENST00000392496 PPP1R42Q7Z4L9 355 aa26.48■■□□□ 1.83
SPHK1-202ENST00000392496 VSIG10Q8N0Z9 540 aa26.48■■□□□ 1.83
SPHK1-202ENST00000392496 BCL9O00512 1426 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 NBPF26B4DH59 902 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 GRM8O00222 908 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 IGKV5-2P06315 115 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 MTX1Q13505 466 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 NBPF14Q5TI25 921 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 NBPF10Q6P3W6 841 aaKnown RBP26.47■■□□□ 1.83
SPHK1-202ENST00000392496 NBPF15Q8N660 670 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 DDRGK1Q96HY6 314 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 TEX13AQ9BXU3 409 aaPredicted RBP26.47■■□□□ 1.83
SPHK1-202ENST00000392496 EXOC6BQ9Y2D4 811 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 ARFGEF2Q9Y6D5 1785 aa26.47■■□□□ 1.83
SPHK1-202ENST00000392496 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.47■■□□□ 1.83
SPHK1-202ENST00000392496 SMARCA5O60264 1052 aaPredicted RBP26.46■■□□□ 1.83
SPHK1-202ENST00000392496 PIP4K2AP48426 406 aaPredicted RBP26.46■■□□□ 1.83
SPHK1-202ENST00000392496 BARGINQ6ZT62 677 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms