RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ANXA1P04083 346 aa14.34□□□□□ -0.11
SMARCAL1-203ENST00000392128 PDIA6Q15084 440 aa14.34□□□□□ -0.11
SMARCAL1-203ENST00000392128 PROSER3Q2NL68 480 aa14.34□□□□□ -0.11
SMARCAL1-203ENST00000392128 CHD1LQ86WJ1 897 aa14.34□□□□□ -0.11
SMARCAL1-203ENST00000392128 DCTPP1Q9H773 170 aa14.34□□□□□ -0.11
SMARCAL1-203ENST00000392128 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.11
SMARCAL1-203ENST00000392128 PI4KAP2A4QPH2 592 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 ADAMTS2O95450 1211 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 GNAI2P04899 355 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 PI4KAP1Q8N8J0 262 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 SRCIN1Q9C0H9 1055 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 TNS2Q63HR2 1409 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 SLIT2O94813 1529 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 ITGB4P16144 1822 aa14.33□□□□□ -0.12
SMARCAL1-203ENST00000392128 BEND3Q5T5X7 828 aa14.32□□□□□ -0.12
SMARCAL1-203ENST00000392128 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
SMARCAL1-203ENST00000392128 CDCA7Q9BWT1 371 aaPredicted RBP14.32□□□□□ -0.12
SMARCAL1-203ENST00000392128 USP44Q9H0E7 712 aa14.32□□□□□ -0.12
SMARCAL1-203ENST00000392128 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
SMARCAL1-203ENST00000392128 THRAP3Q9Y2W1 955 aaKnown RBP14.32□□□□□ -0.12
SMARCAL1-203ENST00000392128 HMMRO75330 724 aa14.31□□□□□ -0.12
SMARCAL1-203ENST00000392128 SPATA31A1Q5TZJ5 1347 aa14.31□□□□□ -0.12
SMARCAL1-203ENST00000392128 DDX58O95786 925 aaKnown RBP14.31□□□□□ -0.12
SMARCAL1-203ENST00000392128 ANKRD45Q5TZF3 282 aa14.31□□□□□ -0.12
SMARCAL1-203ENST00000392128 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
SMARCAL1-203ENST00000392128 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 JCADQ9P266 1359 aa14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 ERBB4Q15303 1308 aa14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 NUTM2BA6NNL0 878 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 NUTM2EB1AL46 878 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 NUTM2AQ8IVF1 878 aaPredicted RBP14.3□□□□□ -0.12
SMARCAL1-203ENST00000392128 IBTKQ9P2D0 1353 aaPredicted RBP14.29□□□□□ -0.12
SMARCAL1-203ENST00000392128 EXOC5O00471 708 aa14.29□□□□□ -0.12
SMARCAL1-203ENST00000392128 ALDH1L1O75891 902 aa14.29□□□□□ -0.12
SMARCAL1-203ENST00000392128 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
SMARCAL1-203ENST00000392128 LRP10Q7Z4F1 713 aa14.29□□□□□ -0.12
SMARCAL1-203ENST00000392128 TMOD3Q9NYL9 352 aa14.29□□□□□ -0.12
SMARCAL1-203ENST00000392128 SPATA31A5Q5VU36 1347 aa14.28□□□□□ -0.12
SMARCAL1-203ENST00000392128 SPATA31A7Q8IWB4 1347 aa14.28□□□□□ -0.12
SMARCAL1-203ENST00000392128 ATP8B2P98198 1209 aa14.27□□□□□ -0.12
SMARCAL1-203ENST00000392128 LRRFIP2Q9Y608 721 aaKnown RBP14.27□□□□□ -0.12
SMARCAL1-203ENST00000392128 MYL6BP14649 208 aa14.27□□□□□ -0.13
SMARCAL1-203ENST00000392128 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
SMARCAL1-203ENST00000392128 ARFGEF2Q9Y6D5 1785 aa14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 XAGE3Q8WTP9 111 aa14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 DOT1LQ8TEK3 1739 aa14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 AIMP1Q12904 312 aaKnown RBP14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 COPS6Q7L5N1 327 aa14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 BCL9O00512 1426 aa14.26□□□□□ -0.13
SMARCAL1-203ENST00000392128 AEBP2Q6ZN18 517 aaPredicted RBP14.25□□□□□ -0.13
SMARCAL1-203ENST00000392128 BARGINQ6ZT62 677 aa14.25□□□□□ -0.13
SMARCAL1-203ENST00000392128 CERKQ8TCT0 537 aa14.25□□□□□ -0.13
SMARCAL1-203ENST00000392128 PIGBQ92521 554 aa14.25□□□□□ -0.13
SMARCAL1-203ENST00000392128 NBPF7P0C2Y1 421 aaPredicted RBP14.25□□□□□ -0.13
SMARCAL1-203ENST00000392128 RIC3Q7Z5B4 369 aa14.25□□□□□ -0.13
SMARCAL1-203ENST00000392128 PNMA6EA0A0J9YXQ4 647 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 VSIG10Q8N0Z9 540 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 HDAC5Q9UQL6 1122 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 DDB1Q16531 1140 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 ANKRD13DQ6ZTN6 518 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 UNC5CLQ8IV45 518 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 SSH3Q8TE77 659 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 UTYO14607 1347 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 NUP188Q5SRE5 1749 aa14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.24□□□□□ -0.13
SMARCAL1-203ENST00000392128 AFDNP55196 1824 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 PTCD1O75127 700 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 BMP2KLQ5H9B9 411 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 METTL22Q9BUU2 404 aaPredicted RBP14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 NBPF26B4DH59 902 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 NEXNQ0ZGT2 675 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 CWF19L2Q2TBE0 894 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 NBPF14Q5TI25 921 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 NBPF10Q6P3W6 841 aaKnown RBP14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 NBPF15Q8N660 670 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 ATG3Q9NT62 314 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 C9orf78Q9NZ63 289 aaPredicted RBP14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 BCL9LQ86UU0 1499 aa14.23□□□□□ -0.13
SMARCAL1-203ENST00000392128 POLA2Q14181 598 aa14.22□□□□□ -0.13
SMARCAL1-203ENST00000392128 TEX13AQ9BXU3 409 aaPredicted RBP14.22□□□□□ -0.13
SMARCAL1-203ENST00000392128 ASAP1Q9ULH1 1129 aa14.22□□□□□ -0.13
SMARCAL1-203ENST00000392128 IGKV5-2P06315 115 aa14.22□□□□□ -0.13
SMARCAL1-203ENST00000392128 PIP4K2AP48426 406 aaPredicted RBP14.22□□□□□ -0.13
SMARCAL1-203ENST00000392128 GRM8O00222 908 aa14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 MTX1Q13505 466 aa14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 PPP1R42Q7Z4L9 355 aa14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 NPM2Q86SE8 214 aaKnown RBP14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 PLEKHM2Q8IWE5 1019 aa14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 PLBD2Q8NHP8 589 aa14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 KAT6BQ8WYB5 2073 aa14.21□□□□□ -0.13
SMARCAL1-203ENST00000392128 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.14
SMARCAL1-203ENST00000392128 VPS72Q15906 364 aa14.21□□□□□ -0.14
SMARCAL1-203ENST00000392128 FNBP4Q8N3X1 1017 aaPredicted RBP14.21□□□□□ -0.14
SMARCAL1-203ENST00000392128 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.14
SMARCAL1-203ENST00000392128 NGLY1Q96IV0 654 aa14.2□□□□□ -0.14
SMARCAL1-203ENST00000392128 C8orf37Q96NL8 207 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms