RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 SPG7Q9UQ90 795 aa26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 NCOA3Q9Y6Q9 1424 aa26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 CWF19L2Q2TBE0 894 aaKnown RBP26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 SLC52A2Q9HAB3 445 aa26.23■■□□□ 1.79
SPTBN4-203ENST00000392023 CAMTA1Q9Y6Y1 1673 aa26.22■■□□□ 1.79
SPTBN4-203ENST00000392023 KDM6AO15550 1401 aaPredicted RBP26.22■■□□□ 1.79
SPTBN4-203ENST00000392023 MYL6BP14649 208 aa26.22■■□□□ 1.79
SPTBN4-203ENST00000392023 SRGAP3O43295 1099 aa26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 CD2BP2O95400 341 aaKnown RBP26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 IFNL2Q8IZJ0 200 aa26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 COL18A1P39060 1754 aa26.2■■□□□ 1.79
SPTBN4-203ENST00000392023 SURF6O75683 361 aaKnown RBP26.2■■□□□ 1.78
SPTBN4-203ENST00000392023 HSCBQ8IWL3 235 aa26.2■■□□□ 1.78
SPTBN4-203ENST00000392023 PRDM11Q9NQV5 511 aa26.2■■□□□ 1.78
SPTBN4-203ENST00000392023 HEG1Q9ULI3 1381 aa26.19■■□□□ 1.78
SPTBN4-203ENST00000392023 LMTK3Q96Q04 1460 aa26.19■■□□□ 1.78
SPTBN4-203ENST00000392023 ZNF496Q96IT1 587 aaPredicted RBP26.18■■□□□ 1.78
SPTBN4-203ENST00000392023 IBTKQ9P2D0 1353 aaPredicted RBP26.18■■□□□ 1.78
SPTBN4-203ENST00000392023 STRCQ7RTU9 1775 aa26.18■■□□□ 1.78
SPTBN4-203ENST00000392023 PXDNLA1KZ92 1463 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 NUTM1Q86Y26 1132 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 SSH3Q8TE77 659 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 PDIA6Q15084 440 aa26.17■■□□□ 1.78
SPTBN4-203ENST00000392023 KSR2Q6VAB6 950 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 TOM1L2Q6ZVM7 507 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 FOXD4L1Q9NU39 408 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 C9orf78Q9NZ63 289 aaPredicted RBP26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 MX1P20591 662 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 USP16Q9Y5T5 823 aa26.16■■□□□ 1.78
SPTBN4-203ENST00000392023 CHMP4AQ9BY43 222 aa26.15■■□□□ 1.78
SPTBN4-203ENST00000392023 RILPL2Q969X0 211 aa26.15■■□□□ 1.78
SPTBN4-203ENST00000392023 STRN4Q9NRL3 753 aa26.14■■□□□ 1.78
SPTBN4-203ENST00000392023 OVOS2A0A0G2JMS6 1433 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 TRIM6-TRIM34B2RNG4 842 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 USP26Q9BXU7 913 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 ZMYND15Q9H091 742 aa26.14■■□□□ 1.77
SPTBN4-203ENST00000392023 SIPA1L3O60292 1781 aaPredicted RBP26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 SALL3Q9BXA9 1300 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 OSBPL3Q9H4L5 887 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 DDX21Q9NR30 783 aaKnown RBP eCLIP26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 HYPKQ9NX55 129 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 CRYBG1Q9Y4K1 1723 aa26.13■■□□□ 1.77
SPTBN4-203ENST00000392023 MAP4K4O95819 1239 aaPredicted RBP26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 UNC5CLQ8IV45 518 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 DCAF5Q96JK2 942 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 POLA2Q14181 598 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 TTC5Q8N0Z6 440 aa26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.12■■□□□ 1.77
SPTBN4-203ENST00000392023 CABP4P57796 275 aa26.11■■□□□ 1.77
SPTBN4-203ENST00000392023 CASC1Q6TDU7 716 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 COPS6Q7L5N1 327 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 RIC3Q7Z5B4 369 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 RHPN1Q8TCX5 695 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 PA2G4Q9UQ80 394 aaKnown RBP26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 SCN11AQ9UI33 1791 aa26.1■■□□□ 1.77
SPTBN4-203ENST00000392023 HSP90AB1P08238 724 aaKnown RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 XAGE3Q8WTP9 111 aa26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 JARID2Q92833 1246 aaPredicted RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 N4BP2Q86UW6 1770 aaPredicted RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 CPDO75976 1380 aa26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 SOS2Q07890 1332 aaPredicted RBP26.09■■□□□ 1.77
SPTBN4-203ENST00000392023 DDX54Q8TDD1 881 aaKnown RBP26.08■■□□□ 1.77
SPTBN4-203ENST00000392023 SNX21Q969T3 373 aa26.08■■□□□ 1.77
SPTBN4-203ENST00000392023 OS9Q13438 667 aaPredicted RBP26.07■■□□□ 1.76
SPTBN4-203ENST00000392023 ADAMTS7Q9UKP4 1686 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 WDR17Q8IZU2 1322 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 IGKV5-2P06315 115 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 LARP1Q6PKG0 1096 aaKnown RBP26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 VSIG10Q8N0Z9 540 aa26.06■■□□□ 1.76
SPTBN4-203ENST00000392023 DDX58O95786 925 aaKnown RBP26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 SUCLG2Q96I99 432 aa26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 C5P01031 1676 aa26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 ZCRB1Q8TBF4 217 aaKnown RBP26.05■■□□□ 1.76
SPTBN4-203ENST00000392023 ERC2O15083 957 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 ALDH1L1O75891 902 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 SNRPA1P09661 255 aaKnown RBP26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 LINS1Q8NG48 757 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 GRM8O00222 908 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 HSP90AA1P07900 732 aaKnown RBP26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 EVA1CP58658 441 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 KAZALD1Q96I82 304 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 MYD88Q99836 296 aa26.04■■□□□ 1.76
SPTBN4-203ENST00000392023 RAB11FIP3O75154 756 aa26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 FMNL2Q96PY5 1086 aa26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 BICC1Q9H694 974 aaKnown RBP26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 STAP2Q9UGK3 403 aa26.03■■□□□ 1.76
SPTBN4-203ENST00000392023 KIF1BPQ96EK5 621 aa26.02■■□□□ 1.76
SPTBN4-203ENST00000392023 CHMP5Q9NZZ3 219 aa26.02■■□□□ 1.76
SPTBN4-203ENST00000392023 KLHDC4Q8TBB5 520 aa26.01■■□□□ 1.75
SPTBN4-203ENST00000392023 K7ELQ4 463 aaPredicted RBP26■■□□□ 1.75
SPTBN4-203ENST00000392023 PTCD1O75127 700 aaKnown RBP26■■□□□ 1.75
SPTBN4-203ENST00000392023 REC8O95072 547 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26■■□□□ 1.75
SPTBN4-203ENST00000392023 CHMLP26374 656 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 ANKRD13DQ6ZTN6 518 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 IL25Q9H293 177 aa26■■□□□ 1.75
SPTBN4-203ENST00000392023 ATP5J2-PTCD1G3V325 749 aa25.99■■□□□ 1.75
SPTBN4-203ENST00000392023 SIL1Q9H173 461 aa25.99■■□□□ 1.75
SPTBN4-203ENST00000392023 ESYT1Q9BSJ8 1104 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms