RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
ERCC2-201ENST00000391941 NBPF7P0C2Y1 421 aaPredicted RBP21.72■■□□□ 1.07
ERCC2-201ENST00000391941 DNM1Q05193 864 aaKnown RBP21.72■■□□□ 1.07
ERCC2-201ENST00000391941 NECAB1Q8N987 351 aa21.72■■□□□ 1.07
ERCC2-201ENST00000391941 AMPHP49418 695 aa21.71■■□□□ 1.07
ERCC2-201ENST00000391941 SOS1Q07889 1333 aaPredicted RBP21.71■■□□□ 1.07
ERCC2-201ENST00000391941 ADCK5Q3MIX3 580 aa21.71■■□□□ 1.07
ERCC2-201ENST00000391941 INTS4Q96HW7 963 aaKnown RBP21.71■■□□□ 1.07
ERCC2-201ENST00000391941 ZHX1Q9UKY1 873 aaPredicted RBP21.71■■□□□ 1.07
ERCC2-201ENST00000391941 NRXN3Q9Y4C0 1643 aa21.71■■□□□ 1.07
ERCC2-201ENST00000391941 UBTFL1P0CB47 393 aaPredicted RBP21.71■■□□□ 1.07
ERCC2-201ENST00000391941 FERMT3Q86UX7 667 aa21.71■■□□□ 1.07
ERCC2-201ENST00000391941 WDR33Q9C0J8 1336 aaKnown RBP21.7■■□□□ 1.07
ERCC2-201ENST00000391941 HSPA4P34932 840 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 ANAPC15P60006 121 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 CSPP1Q1MSJ5 1256 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 CASTP20810 708 aaKnown RBP21.7■■□□□ 1.06
ERCC2-201ENST00000391941 MCM5P33992 734 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 NOLC1Q14978 699 aaKnown RBP eCLIP21.7■■□□□ 1.06
ERCC2-201ENST00000391941 SRGAP3O43295 1099 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 CAMK4Q16566 473 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 ZNF710Q8N1W2 664 aa21.7■■□□□ 1.06
ERCC2-201ENST00000391941 SYAP1Q96A49 352 aaPredicted RBP21.7■■□□□ 1.06
ERCC2-201ENST00000391941 VPS37CA5D8V6 355 aaPredicted RBP21.69■■□□□ 1.06
ERCC2-201ENST00000391941 OVOS2A0A0J9YW53 1432 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 OVOS2Q6IE36 1432 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 DYNC1I1O14576 645 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 PTH1RQ03431 593 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 PEAK1Q9H792 1746 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 STX6O43752 255 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 GNAI3P08754 354 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 IL17REQ8NFR9 667 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 PYCARDQ9ULZ3 195 aa21.68■■□□□ 1.06
ERCC2-201ENST00000391941 ZSCAN22P10073 491 aaPredicted RBP21.67■■□□□ 1.06
ERCC2-201ENST00000391941 PI4K2BQ8TCG2 481 aa21.67■■□□□ 1.06
ERCC2-201ENST00000391941 PRDM4Q9UKN5 801 aa21.67■■□□□ 1.06
ERCC2-201ENST00000391941 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
ERCC2-201ENST00000391941 CBX1P83916 185 aa21.67■■□□□ 1.06
ERCC2-201ENST00000391941 STAP2Q9UGK3 403 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 ITSN1Q15811 1721 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 FAM69CQ0P6D2 419 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 CCDC183Q5T5S1 534 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 CCDC30Q5VVM6 783 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 SPATA31D1Q6ZQQ2 1576 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 CEP170BQ9Y4F5 1589 aaPredicted RBP21.66■■□□□ 1.06
ERCC2-201ENST00000391941 PRPF40BQ6NWY9 871 aaKnown RBP21.66■■□□□ 1.06
ERCC2-201ENST00000391941 SMC3Q9UQE7 1217 aa21.66■■□□□ 1.06
ERCC2-201ENST00000391941 KCNQ3O43525 872 aa21.65■■□□□ 1.06
ERCC2-201ENST00000391941 LSG1Q9H089 658 aaKnown RBP21.65■■□□□ 1.06
ERCC2-201ENST00000391941 SGSM2O43147 1006 aa21.65■■□□□ 1.06
ERCC2-201ENST00000391941 GJB2P29033 226 aa21.65■■□□□ 1.06
ERCC2-201ENST00000391941 HDGFL1Q5TGJ6 251 aa21.65■■□□□ 1.06
ERCC2-201ENST00000391941 SIRT1Q96EB6 747 aa21.65■■□□□ 1.06
ERCC2-201ENST00000391941 PA2G4Q9UQ80 394 aaKnown RBP21.65■■□□□ 1.06
ERCC2-201ENST00000391941 SPDYE4A6NLX3 237 aa21.64■■□□□ 1.06
ERCC2-201ENST00000391941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.64■■□□□ 1.06
ERCC2-201ENST00000391941 IGSF3O75054 1194 aa21.64■■□□□ 1.05
ERCC2-201ENST00000391941 OS9Q13438 667 aaPredicted RBP21.64■■□□□ 1.05
ERCC2-201ENST00000391941 JAKMIP1Q96N16 626 aaKnown RBP21.64■■□□□ 1.05
ERCC2-201ENST00000391941 TTC14Q96N46 770 aa21.64■■□□□ 1.05
ERCC2-201ENST00000391941 KCNF1Q9H3M0 494 aa21.64■■□□□ 1.05
ERCC2-201ENST00000391941 TECPR2O15040 1411 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 F13A1P00488 732 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 C14orf37Q86TY3 774 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 PIBF1Q8WXW3 757 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 SSH2Q76I76 1423 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 RAD50Q92878 1312 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 ARHGEF10O15013 1369 aa21.63■■□□□ 1.05
ERCC2-201ENST00000391941 PHF14O94880 888 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 TAF7Q15545 349 aaPredicted RBP21.62■■□□□ 1.05
ERCC2-201ENST00000391941 TAF6LQ9Y6J9 622 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 USP6P35125 1406 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 ST3GAL1Q11201 340 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 CKAP2LQ8IYA6 745 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 NGDNQ8NEJ9 315 aaKnown RBP21.62■■□□□ 1.05
ERCC2-201ENST00000391941 MYRIPQ8NFW9 859 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
ERCC2-201ENST00000391941 RGPD1P0DJD0 1748 aa21.61■■□□□ 1.05
ERCC2-201ENST00000391941 KDM4AO75164 1064 aa21.61■■□□□ 1.05
ERCC2-201ENST00000391941 LIMCH1Q9UPQ0 1083 aa21.61■■□□□ 1.05
ERCC2-201ENST00000391941 PLEKHG3A1L390 1219 aa21.61■■□□□ 1.05
ERCC2-201ENST00000391941 IL17RAQ96F46 866 aa21.61■■□□□ 1.05
ERCC2-201ENST00000391941 PI4KAP2A4QPH2 592 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 PI4KAP1Q8N8J0 262 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 CHPF2Q9P2E5 772 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 USP31Q70CQ4 1352 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 TUBGCP6Q96RT7 1819 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 GNAT3A8MTJ3 354 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
ERCC2-201ENST00000391941 NLRP6P59044 892 aa21.59■■□□□ 1.05
ERCC2-201ENST00000391941 UBE2HP62256 183 aa21.59■■□□□ 1.05
ERCC2-201ENST00000391941 SSH3Q8TE77 659 aa21.59■■□□□ 1.05
ERCC2-201ENST00000391941 HYPKQ9NX55 129 aa21.59■■□□□ 1.05
ERCC2-201ENST00000391941 TFIP11Q9UBB9 837 aaKnown RBP21.59■■□□□ 1.05
ERCC2-201ENST00000391941 LUZP1Q86V48 1076 aa21.59■■□□□ 1.05
ERCC2-201ENST00000391941 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
ERCC2-201ENST00000391941 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
ERCC2-201ENST00000391941 PPFIA3O75145 1194 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms