RNA–Protein interactions for RNA: ENST00000391200.1

SNORA40.18-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.18-201ENST00000391200 HAP1P54257 671 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 RBM6P78332 1123 aaKnown RBP2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 FUT2Q10981 343 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 CAMK2BQ13554 666 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 TMEM132EQ6IEE7 984 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 C1orf229Q6ZS94 237 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 BRINP3Q76B58 766 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 WAPLQ7Z5K2 1190 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 DEFB132Q7Z7B7 95 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 CADPS2Q86UW7 1296 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 LINC00528Q8N1L1 170 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 SLC52A1Q9NWF4 448 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 CUEDC1Q9NWM3 386 aaPredicted RBP2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 PIK3C2BO00750 1634 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 PLA2R1Q13018 1463 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 NCOA2Q15596 1464 aa2.88□□□□□ -1.95
SNORA40.18-201ENST00000391200 TMEM2Q9UHN6 1383 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 SRCAPQ6ZRS2 3230 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 RGPD8O14715 1765 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 GRXCR2A6NFK2 248 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 SHISA8B8ZZ34 492 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 ZIC2O95409 532 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 HOXB4P17483 251 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 OSBPP22059 807 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 SH3BP2P78314 561 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 SAFB2Q14151 953 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 KRTAP9-3Q9BYQ3 159 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 MED14O60244 1454 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 PZPP20742 1482 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 CAMSAP2Q08AD1 1489 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 FYCO1Q9BQS8 1478 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 NLRP1Q9C000 1473 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 TIAM1Q13009 1591 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 INO80Q9ULG1 1556 aaPredicted RBP2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 JCADQ9P266 1359 aa2.87□□□□□ -1.95
SNORA40.18-201ENST00000391200 RNF17Q9BXT8 1623 aaKnown RBP2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 CEP162Q5TB80 1403 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 ZC3H13Q5T200 1668 aaKnown RBP2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 CCDC141Q6ZP82 1450 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 SCAF11Q99590 1463 aaKnown RBP2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 PSME1Q06323 249 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 SF3B2Q13435 895 aaKnown RBP2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 LINC00114Q6XXX2 140 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 KRT28Q7Z3Y7 464 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 TPSG1Q9NRR2 321 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 KDM2AQ9Y2K7 1162 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 BRWD3Q6RI45 1802 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 DEPDC5O75140 1603 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 KIF15Q9NS87 1388 aa2.86□□□□□ -1.95
SNORA40.18-201ENST00000391200 ABCC5O15440 1437 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 RIMS2Q9UQ26 1411 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 ERVK-7P63135 1459 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 ABCC3O15438 1527 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 KDM5DQ9BY66 1539 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 SENP3-EIF4A1A0A087X0R7 540 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 ZBTB7CA1YPR0 619 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 FAM83GA6ND36 823 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 GPR25O00155 361 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 NUTM2GQ5VZR2 741 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 PMFBP1Q8TBY8 1022 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 GJD4Q96KN9 370 aaPredicted RBP2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 TRPC5Q9UL62 973 aaPredicted RBP2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 SALL2Q9Y467 1007 aaPredicted RBP2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 RNF114Q9Y508 228 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 PLXNC1O60486 1568 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 SPATA31A6Q5VVP1 1343 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 TET3O43151 1660 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 NUP155O75694 1391 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 ANKRD30AQ9BXX3 1397 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 MYOM3Q5VTT5 1437 aa2.85□□□□□ -1.95
SNORA40.18-201ENST00000391200 LRRC9Q6ZRR7 1453 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 TTLL8A6PVC2 850 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 DXOO77932 396 aaKnown RBP2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 NR3C2P08235 984 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 GATA4P43694 442 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 EVA1CP58658 441 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 R3HDM1Q15032 1099 aaKnown RBP2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 SEPT12Q8IYM1 358 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 USP35Q9P2H5 1018 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 MKL2Q9ULH7 1088 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 GCC2Q8IWJ2 1684 aa2.84□□□□□ -1.95
SNORA40.18-201ENST00000391200 METP08581 1390 aa2.84□□□□□ -1.96
SNORA40.18-201ENST00000391200 PTPRUQ92729 1446 aa2.84□□□□□ -1.96
SNORA40.18-201ENST00000391200 EFCAB6Q5THR3 1501 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 DUOX2Q9NRD8 1548 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 LRP6O75581 1613 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 PTPN23Q9H3S7 1636 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 OIP5O43482 229 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 ECM2O94769 699 aaPredicted RBP2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 TRIM37O94972 964 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 APBA3O96018 575 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 TAL1P17542 331 aaPredicted RBP2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 ATP6V1AP38606 617 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 PDIA6Q15084 440 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 CHRNA2Q15822 529 aa2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 EZH2Q15910 746 aaKnown RBP2.83□□□□□ -1.96
SNORA40.18-201ENST00000391200 KRT27Q7Z3Y8 459 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms