RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 MCCD1P59942 119 aaPredicted RBP4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 TNP2Q05952 138 aa4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 NR1H3Q13133 447 aa4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 RHBDD1Q8TEB9 315 aa4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 KDM4CQ9H3R0 1056 aa4.56□□□□□ -1.68
RNU6-239P-201ENST00000390990 BTBD11A6QL63 1104 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 PLA2G4AP47712 749 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 TSGA10IPQ3SY00 556 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 FAM182BQ5T319 152 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 TBC1D9Q6ZT07 1266 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 NBPF11Q86T75 865 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 NLRP8Q86W28 1048 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 DDRGK1Q96HY6 314 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 ETNK1Q9HBU6 452 aa4.55□□□□□ -1.68
RNU6-239P-201ENST00000390990 FAM229AH3BQW9 127 aa4.54□□□□□ -1.68
RNU6-239P-201ENST00000390990 GPR37L1O60883 481 aa4.54□□□□□ -1.68
RNU6-239P-201ENST00000390990 MYCP01106 439 aaPredicted RBP4.54□□□□□ -1.68
RNU6-239P-201ENST00000390990 ESCO1Q5FWF5 840 aa4.54□□□□□ -1.68
RNU6-239P-201ENST00000390990 AVENQ9NQS1 362 aaPredicted RBP4.54□□□□□ -1.68
RNU6-239P-201ENST00000390990 CEP126Q9P2H0 1117 aa4.54□□□□□ -1.68
RNU6-239P-201ENST00000390990 A0A1W2PNR3 127 aa4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 KHNYNO15037 678 aaKnown RBP4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 COL9A3Q14050 684 aaPredicted RBP4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 TLR1Q15399 786 aa4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 TMEM259Q4ZIN3 620 aa4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 ZNF468Q5VIY5 522 aaPredicted RBP4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 MDFIQ99750 246 aa4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 STRN4Q9NRL3 753 aa4.53□□□□□ -1.68
RNU6-239P-201ENST00000390990 HYAL3O43820 417 aaPredicted RBP4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 APBA3O96018 575 aa4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 PRRT3Q5FWE3 981 aa4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 C1orf216Q8TAB5 229 aa4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 AIDAQ96BJ3 306 aa4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 GOLGA2P5Q9HBQ8 144 aa4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 PRR12Q9ULL5 1215 aa4.52□□□□□ -1.69
RNU6-239P-201ENST00000390990 ELOA3CA0A087WX78 387 aaPredicted RBP4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 ELOA3DA6NLF2 546 aaPredicted RBP4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 LRP8Q14114 963 aa4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 GRIK4Q16099 956 aa4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 ELOA3BQ3SY89 546 aa4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 ARSJQ5FYB0 599 aaPredicted RBP4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 ELOA3Q8NG57 546 aa4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 ZNF592Q92610 1267 aa4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 ZNF330Q9Y3S2 320 aaPredicted RBP4.51□□□□□ -1.69
RNU6-239P-201ENST00000390990 SPDYE3A6NKU9 549 aa4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 SCNN1DP51172 638 aa4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 C8orf86Q6ZUL3 223 aa4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 ZNF295-AS1Q8N0V1 137 aa4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 ZIC5Q96T25 663 aa4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 NIFKQ9BYG3 293 aaKnown RBP4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 STARD13Q9Y3M8 1113 aa4.5□□□□□ -1.69
RNU6-239P-201ENST00000390990 M0R082 166 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 EFSO43281 561 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 H2AFB1P0C5Y9 115 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 H2AFB2P0C5Z0 115 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 FAM157BP0CG42 384 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 ALAS2P22557 587 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 USP4Q13107 963 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 SYT9Q86SS6 491 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 PHTF2Q8N3S3 785 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 ZNF417Q8TAU3 575 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 ZNF587Q96SQ5 575 aaPredicted RBP4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 MARK1Q9P0L2 795 aa4.49□□□□□ -1.69
RNU6-239P-201ENST00000390990 INHAP05111 366 aa4.48□□□□□ -1.69
RNU6-239P-201ENST00000390990 SMTNP53814 917 aa4.48□□□□□ -1.69
RNU6-239P-201ENST00000390990 TRIM28Q13263 835 aaKnown RBP4.48□□□□□ -1.69
RNU6-239P-201ENST00000390990 ADARB2-AS1A8MUL3 147 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 SIN3BO75182 1162 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 ALBP02768 609 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 NID1P14543 1247 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 SELPP16109 830 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 GDF10P55107 478 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 SAMD5Q5TGI4 173 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 MICALL1Q8N3F8 863 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 PCMTD1Q96MG8 357 aaPredicted RBP4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 NACC1Q96RE7 527 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 PRDM6Q9NQX0 595 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 IQSEC3Q9UPP2 1182 aaPredicted RBP4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 DOLKQ9UPQ8 538 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 USP3Q9Y6I4 520 aa4.47□□□□□ -1.69
RNU6-239P-201ENST00000390990 LAMC2Q13753 1193 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 ADGRE1Q14246 886 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 MBTPS1Q14703 1052 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 NBPF1Q3BBV0 1214 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 OXLD1Q5BKU9 147 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 MTMR14Q8NCE2 650 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 GOPCQ9HD26 462 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 ZDHHC3Q9NYG2 299 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 SERTAD1Q9UHV2 236 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 GJA3Q9Y6H8 435 aa4.46□□□□□ -1.7
RNU6-239P-201ENST00000390990 C9orf172C9J069 976 aa4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 TATP17735 454 aaPredicted RBP4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 C20orf204Q6ZNR8 217 aa4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 SLC30A3Q99726 388 aa4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 CHIC2Q9UKJ5 165 aa4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 PARP3Q9Y6F1 533 aa4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 NDUFB9Q9Y6M9 179 aa4.45□□□□□ -1.7
RNU6-239P-201ENST00000390990 A6NJY4 79 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 CDK2AP1O14519 115 aa4.44□□□□□ -1.7
RNU6-239P-201ENST00000390990 TXLNAP40222 546 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms