RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
TRAV16-201ENST00000390444 NFE2L2Q16236 605 aa6.74□□□□□ -1.33
TRAV16-201ENST00000390444 ZSWIM6Q9HCJ5 1215 aa6.74□□□□□ -1.33
TRAV16-201ENST00000390444 NEFLP07196 543 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 POTEJP0CG39 1038 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 HOXB3P14651 431 aaPredicted RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 TSR1Q2NL82 804 aaKnown RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 ERICH6BQ5W0A0 696 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 SULT6B1Q6IMI4 303 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 AEBP1Q8IUX7 1158 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 DDX17Q92841 729 aaKnown RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 PHACTR3Q96KR7 559 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 EYA1Q99502 592 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 SCUBE2Q9NQ36 999 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 NPDC1Q9NQX5 325 aaPredicted RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 RCAN3Q9UKA8 241 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 RRP7AQ9Y3A4 280 aaKnown RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 SUPT16HQ9Y5B9 1047 aaKnown RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 OVOS2A0A0G2JMS6 1433 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 ERBB3P21860 1342 aa6.73□□□□□ -1.33
TRAV16-201ENST00000390444 COL5A2P05997 1499 aaPredicted RBP6.73□□□□□ -1.33
TRAV16-201ENST00000390444 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
TRAV16-201ENST00000390444 RIPK4P57078 832 aa6.72□□□□□ -1.33
TRAV16-201ENST00000390444 CALD1Q05682 793 aaKnown RBP6.72□□□□□ -1.33
TRAV16-201ENST00000390444 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
TRAV16-201ENST00000390444 MAMSTRQ6ZN01 415 aa6.72□□□□□ -1.33
TRAV16-201ENST00000390444 DDRGK1Q96HY6 314 aa6.72□□□□□ -1.33
TRAV16-201ENST00000390444 MYH16Q9H6N6 1097 aa6.72□□□□□ -1.33
TRAV16-201ENST00000390444 KIAA0232Q92628 1395 aa6.71□□□□□ -1.33
TRAV16-201ENST00000390444 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.71□□□□□ -1.34
TRAV16-201ENST00000390444 NUDT7P0C024 238 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
TRAV16-201ENST00000390444 ZNF454Q8N9F8 522 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 IL27Q8NEV9 243 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 GAS2L2Q8NHY3 880 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 CERKQ8TCT0 537 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 ZDHHC16Q969W1 377 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 RBM27Q9P2N5 1060 aaKnown RBP6.71□□□□□ -1.34
TRAV16-201ENST00000390444 FANCIQ9NVI1 1328 aa6.71□□□□□ -1.34
TRAV16-201ENST00000390444 RRP1P56182 461 aaKnown RBP6.7□□□□□ -1.34
TRAV16-201ENST00000390444 ANKRD24Q8TF21 1146 aa6.7□□□□□ -1.34
TRAV16-201ENST00000390444 IFT57Q9NWB7 429 aa6.7□□□□□ -1.34
TRAV16-201ENST00000390444 MAP3K5Q99683 1374 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 PAPPAQ13219 1627 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 CRB1P82279 1406 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 MRC1P22897 1456 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 POTEB2H3BUK9 544 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 HTATSF1O43719 755 aaKnown RBP6.69□□□□□ -1.34
TRAV16-201ENST00000390444 TOM1O60784 492 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 ZNF853P0CG23 659 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 ARSIQ5FYB1 569 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 NBPF6Q5VWK0 638 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 GIGYF2Q6Y7W6 1299 aaKnown RBP6.69□□□□□ -1.34
TRAV16-201ENST00000390444 LRRC59Q96AG4 307 aaKnown RBP6.69□□□□□ -1.34
TRAV16-201ENST00000390444 NBPF4Q96M43 638 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 FAM117AQ9C073 453 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 AXIN2Q9Y2T1 843 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 MEGF6O75095 1541 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 LAMB4A4D0S4 1761 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 UBR2Q8IWV8 1755 aa6.69□□□□□ -1.34
TRAV16-201ENST00000390444 CLCN1P35523 988 aa6.68□□□□□ -1.34
TRAV16-201ENST00000390444 ZC3H6P61129 1189 aaKnown RBP6.68□□□□□ -1.34
TRAV16-201ENST00000390444 GNAI1P63096 354 aa6.68□□□□□ -1.34
TRAV16-201ENST00000390444 MTHFSDQ2M296 383 aaKnown RBP6.68□□□□□ -1.34
TRAV16-201ENST00000390444 ZNF710Q8N1W2 664 aa6.68□□□□□ -1.34
TRAV16-201ENST00000390444 CABLES1Q8TDN4 633 aa6.68□□□□□ -1.34
TRAV16-201ENST00000390444 KHSRPQ92945 711 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRAV16-201ENST00000390444 ZNF428Q96B54 188 aa6.68□□□□□ -1.34
TRAV16-201ENST00000390444 LTV1Q96GA3 475 aaPredicted RBP6.68□□□□□ -1.34
TRAV16-201ENST00000390444 CEMIPQ8WUJ3 1361 aa6.68□□□□□ -1.34
TRAV16-201ENST00000390444 TOGARAM1Q9Y4F4 1720 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 ITGB4P16144 1822 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 ZBTB7CA1YPR0 619 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 AMOTQ4VCS5 1084 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 C6orf132Q5T0Z8 1188 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 GPR153Q6NV75 609 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 ADAM33Q9BZ11 813 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 PRDM11Q9NQV5 511 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 LRP6O75581 1613 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 C5P01031 1676 aa6.67□□□□□ -1.34
TRAV16-201ENST00000390444 PSDA5PKW4 1024 aaPredicted RBP6.66□□□□□ -1.34
TRAV16-201ENST00000390444 FAM83GA6ND36 823 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 CHRNA2Q15822 529 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 PLEKHO1Q53GL0 409 aaPredicted RBP6.66□□□□□ -1.34
TRAV16-201ENST00000390444 PPP4R3BQ5MIZ7 849 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 METTL3Q86U44 580 aaKnown RBP6.66□□□□□ -1.34
TRAV16-201ENST00000390444 USHBP1Q8N6Y0 703 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.66□□□□□ -1.34
TRAV16-201ENST00000390444 TSR2Q969E8 191 aaKnown RBP6.66□□□□□ -1.34
TRAV16-201ENST00000390444 THUMPD2Q9BTF0 503 aaKnown RBP6.66□□□□□ -1.34
TRAV16-201ENST00000390444 GPCPD1Q9NPB8 672 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 MBIPQ9NS73 344 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 BABAM1Q9NWV8 329 aa6.66□□□□□ -1.34
TRAV16-201ENST00000390444 GLI3P10071 1580 aa6.65□□□□□ -1.34
TRAV16-201ENST00000390444 CHL1O00533 1208 aa6.65□□□□□ -1.34
TRAV16-201ENST00000390444 MS4A1P11836 297 aa6.65□□□□□ -1.34
TRAV16-201ENST00000390444 RARSP54136 660 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms