RNA–Protein interactions for RNA: ENST00000390443.3

TRAV8-6-201, Transcript of T cell receptor alpha variable 8-6, humanhuman

APPRIS P1 BASIC

Gene TRAV8-6, Length 561 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6-201ENST00000390443 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
TRAV8-6-201ENST00000390443 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
TRAV8-6-201ENST00000390443 ZBTB1Q9Y2K1 713 aa12.54□□□□□ -0.4
TRAV8-6-201ENST00000390443 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
TRAV8-6-201ENST00000390443 SERPINB2P05120 415 aa12.53□□□□□ -0.4
TRAV8-6-201ENST00000390443 LMNB1P20700 586 aa12.53□□□□□ -0.4
TRAV8-6-201ENST00000390443 JMYQ8N9B5 988 aa12.53□□□□□ -0.4
TRAV8-6-201ENST00000390443 CLSPNQ9HAW4 1339 aa12.53□□□□□ -0.4
TRAV8-6-201ENST00000390443 CANXP27824 592 aaKnown RBP12.52□□□□□ -0.41
TRAV8-6-201ENST00000390443 COL13A1Q5TAT6 717 aaPredicted RBP12.52□□□□□ -0.41
TRAV8-6-201ENST00000390443 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
TRAV8-6-201ENST00000390443 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
TRAV8-6-201ENST00000390443 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
TRAV8-6-201ENST00000390443 COL15A1P39059 1388 aa12.52□□□□□ -0.41
TRAV8-6-201ENST00000390443 MYH14Q7Z406 1995 aaKnown RBP12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 H0YIN7 160 aa12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 VEGFAP15692 232 aaPredicted RBP12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 PRELPP51888 382 aa12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 MTHFSDQ2M296 383 aaKnown RBP12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 BCL2L12Q9HB09 334 aa12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 ZC3H4Q9UPT8 1303 aaKnown RBP12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 PCNTO95613 3336 aa12.51□□□□□ -0.41
TRAV8-6-201ENST00000390443 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
TRAV8-6-201ENST00000390443 CAPN15O75808 1086 aa12.5□□□□□ -0.41
TRAV8-6-201ENST00000390443 TJP1Q07157 1748 aa12.49□□□□□ -0.41
TRAV8-6-201ENST00000390443 STARD3NLO95772 234 aa12.49□□□□□ -0.41
TRAV8-6-201ENST00000390443 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
TRAV8-6-201ENST00000390443 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
TRAV8-6-201ENST00000390443 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
TRAV8-6-201ENST00000390443 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 TNS4Q8IZW8 715 aa12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
TRAV8-6-201ENST00000390443 A0A087WZG4 1122 aa12.47□□□□□ -0.41
TRAV8-6-201ENST00000390443 NFKBIEO00221 500 aa12.47□□□□□ -0.41
TRAV8-6-201ENST00000390443 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
TRAV8-6-201ENST00000390443 MRC1P22897 1456 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 ARFGEF1Q9Y6D6 1849 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 C21orf2O43822 256 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 CC2D1BQ5T0F9 858 aaKnown RBP12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 PPP4R3CPQ6ZMV5 832 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 TBC1D2BQ9UPU7 963 aa12.46□□□□□ -0.41
TRAV8-6-201ENST00000390443 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 NPHP1O15259 732 aa12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 PDE6BP35913 854 aa12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 TEFQ10587 303 aa12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 CNGB1Q14028 1251 aaPredicted RBP12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 ZNF496Q96IT1 587 aaPredicted RBP12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
TRAV8-6-201ENST00000390443 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 PRR5LQ6MZQ0 368 aa12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 ZNF790Q6PG37 636 aa12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 TEX13AQ9BXU3 409 aaPredicted RBP12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
TRAV8-6-201ENST00000390443 KIF7Q2M1P5 1343 aa12.43□□□□□ -0.42
TRAV8-6-201ENST00000390443 POTECB2RU33 542 aa12.43□□□□□ -0.42
TRAV8-6-201ENST00000390443 IL17REQ8NFR9 667 aa12.43□□□□□ -0.42
TRAV8-6-201ENST00000390443 CCER1Q8TC90 406 aaPredicted RBP12.43□□□□□ -0.42
TRAV8-6-201ENST00000390443 SETDB2Q96T68 719 aa12.43□□□□□ -0.42
TRAV8-6-201ENST00000390443 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
TRAV8-6-201ENST00000390443 TNRC6CQ9HCJ0 1690 aaKnown RBP12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 A1BGP04217 495 aa12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 CNBD1Q8NA66 436 aa12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 GAS2L2Q8NHY3 880 aa12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 SCN11AQ9UI33 1791 aa12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 HEG1Q9ULI3 1381 aa12.42□□□□□ -0.42
TRAV8-6-201ENST00000390443 ST5P78524 1137 aa12.41□□□□□ -0.42
TRAV8-6-201ENST00000390443 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
TRAV8-6-201ENST00000390443 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
TRAV8-6-201ENST00000390443 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
TRAV8-6-201ENST00000390443 DDNO94850 711 aaPredicted RBP12.4□□□□□ -0.42
TRAV8-6-201ENST00000390443 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
TRAV8-6-201ENST00000390443 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
TRAV8-6-201ENST00000390443 MKRN1Q9UHC7 482 aaKnown RBP12.4□□□□□ -0.42
TRAV8-6-201ENST00000390443 BTBD11A6QL63 1104 aa12.39□□□□□ -0.43
TRAV8-6-201ENST00000390443 CAMTA2O94983 1202 aa12.39□□□□□ -0.43
TRAV8-6-201ENST00000390443 STYK1Q6J9G0 422 aa12.39□□□□□ -0.43
TRAV8-6-201ENST00000390443 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
TRAV8-6-201ENST00000390443 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
TRAV8-6-201ENST00000390443 KCNQ3O43525 872 aa12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 POTEIP0CG38 1075 aa12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 POTEJP0CG39 1038 aa12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 SRGNP10124 158 aa12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 PIP4K2AP48426 406 aaPredicted RBP12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
TRAV8-6-201ENST00000390443 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms