RNA–Protein interactions for RNA: ENST00000390439.2

TRAV13-2-201, Transcript of T cell receptor alpha variable 13-2, humanhuman

APPRIS P1 BASIC

Gene TRAV13-2, Length 410 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2-201ENST00000390439 H0YIN7 160 aa13.2□□□□□ -0.3
TRAV13-2-201ENST00000390439 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
TRAV13-2-201ENST00000390439 IL13P35225 146 aa13.2□□□□□ -0.3
TRAV13-2-201ENST00000390439 NFIXQ14938 502 aa13.2□□□□□ -0.3
TRAV13-2-201ENST00000390439 ARFGEF1Q9Y6D6 1849 aa13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 STARD3NLO95772 234 aa13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 SERPINB2P05120 415 aa13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
TRAV13-2-201ENST00000390439 A0A087WZG4 1122 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 RASSF7Q02833 373 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 COL13A1Q5TAT6 717 aaPredicted RBP13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 C2CD5Q86YS7 1000 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 TNS4Q8IZW8 715 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 LGR6Q9HBX8 967 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 PDZRN3Q9UPQ7 1066 aa13.18□□□□□ -0.3
TRAV13-2-201ENST00000390439 BRCA1P38398 1863 aaKnown RBP13.17□□□□□ -0.3
TRAV13-2-201ENST00000390439 NPM2Q86SE8 214 aaKnown RBP13.17□□□□□ -0.3
TRAV13-2-201ENST00000390439 TTC5Q8N0Z6 440 aa13.17□□□□□ -0.3
TRAV13-2-201ENST00000390439 COL15A1P39059 1388 aa13.17□□□□□ -0.3
TRAV13-2-201ENST00000390439 WDR90Q96KV7 1748 aa13.16□□□□□ -0.3
TRAV13-2-201ENST00000390439 CANXP27824 592 aaKnown RBP13.16□□□□□ -0.3
TRAV13-2-201ENST00000390439 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
TRAV13-2-201ENST00000390439 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
TRAV13-2-201ENST00000390439 HMOX1P09601 288 aa13.15□□□□□ -0.3
TRAV13-2-201ENST00000390439 PDE6BP35913 854 aa13.15□□□□□ -0.3
TRAV13-2-201ENST00000390439 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
TRAV13-2-201ENST00000390439 ZNF622Q969S3 477 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAV13-2-201ENST00000390439 TEX13AQ9BXU3 409 aaPredicted RBP13.15□□□□□ -0.3
TRAV13-2-201ENST00000390439 NPHP1O15259 732 aa13.14□□□□□ -0.31
TRAV13-2-201ENST00000390439 CAPN15O75808 1086 aa13.14□□□□□ -0.31
TRAV13-2-201ENST00000390439 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
TRAV13-2-201ENST00000390439 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
TRAV13-2-201ENST00000390439 DIAPH1O60610 1272 aaKnown RBP13.13□□□□□ -0.31
TRAV13-2-201ENST00000390439 MTHFSDQ2M296 383 aaKnown RBP13.13□□□□□ -0.31
TRAV13-2-201ENST00000390439 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
TRAV13-2-201ENST00000390439 NFKBIEO00221 500 aa13.12□□□□□ -0.31
TRAV13-2-201ENST00000390439 PRELPP51888 382 aa13.12□□□□□ -0.31
TRAV13-2-201ENST00000390439 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
TRAV13-2-201ENST00000390439 TEFQ10587 303 aa13.12□□□□□ -0.31
TRAV13-2-201ENST00000390439 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
TRAV13-2-201ENST00000390439 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
TRAV13-2-201ENST00000390439 TJP1Q07157 1748 aa13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 SBF1O95248 1867 aa13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 SCN11AQ9UI33 1791 aa13.11□□□□□ -0.31
TRAV13-2-201ENST00000390439 C21orf2O43822 256 aa13.1□□□□□ -0.31
TRAV13-2-201ENST00000390439 TBC1D9BQ66K14 1250 aa13.1□□□□□ -0.31
TRAV13-2-201ENST00000390439 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
TRAV13-2-201ENST00000390439 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
TRAV13-2-201ENST00000390439 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
TRAV13-2-201ENST00000390439 MRC1P22897 1456 aa13.1□□□□□ -0.31
TRAV13-2-201ENST00000390439 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 ST5P78524 1137 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 ZNF790Q6PG37 636 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 CNBD1Q8NA66 436 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 TAOK3Q9H2K8 898 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
TRAV13-2-201ENST00000390439 CARMIL3Q8ND23 1372 aa13.08□□□□□ -0.31
TRAV13-2-201ENST00000390439 STYK1Q6J9G0 422 aa13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 PRR5LQ6MZQ0 368 aa13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 ZNF496Q96IT1 587 aaPredicted RBP13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 FMNL2Q96PY5 1086 aa13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 CREBZFQ9NS37 354 aa13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 LTBP3Q9NS15 1303 aa13.08□□□□□ -0.32
TRAV13-2-201ENST00000390439 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
TRAV13-2-201ENST00000390439 POTECB2RU33 542 aa13.07□□□□□ -0.32
TRAV13-2-201ENST00000390439 U2SURPO15042 1029 aaKnown RBP13.07□□□□□ -0.32
TRAV13-2-201ENST00000390439 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
TRAV13-2-201ENST00000390439 HEG1Q9ULI3 1381 aa13.07□□□□□ -0.32
TRAV13-2-201ENST00000390439 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
TRAV13-2-201ENST00000390439 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
TRAV13-2-201ENST00000390439 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
TRAV13-2-201ENST00000390439 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
TRAV13-2-201ENST00000390439 IL17REQ8NFR9 667 aa13.05□□□□□ -0.32
TRAV13-2-201ENST00000390439 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
TRAV13-2-201ENST00000390439 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 DDNO94850 711 aaPredicted RBP13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 CAMTA2O94983 1202 aa13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 A1BGP04217 495 aa13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 SRGNP10124 158 aa13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 PRPF40BQ6NWY9 871 aaKnown RBP13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 CLEC4GQ6UXB4 293 aa13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 DZIP3Q86Y13 1208 aaKnown RBP13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 MKRN1Q9UHC7 482 aaKnown RBP13.04□□□□□ -0.32
TRAV13-2-201ENST00000390439 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
TRAV13-2-201ENST00000390439 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
TRAV13-2-201ENST00000390439 AIDAQ96BJ3 306 aa13.03□□□□□ -0.32
TRAV13-2-201ENST00000390439 PCNTO95613 3336 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms