RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 NUDCQ9Y266 331 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 MRC1P22897 1456 aa11.16□□□□□ -0.62
TRBV6-1-201ENST00000390353 ZC3H4Q9UPT8 1303 aaKnown RBP11.15□□□□□ -0.62
TRBV6-1-201ENST00000390353 KIF3CO14782 793 aa11.15□□□□□ -0.62
TRBV6-1-201ENST00000390353 KCNA3P22001 575 aa11.15□□□□□ -0.62
TRBV6-1-201ENST00000390353 SLC39A6Q13433 755 aa11.15□□□□□ -0.62
TRBV6-1-201ENST00000390353 COL5A3P25940 1745 aaPredicted RBP11.15□□□□□ -0.63
TRBV6-1-201ENST00000390353 CEP350Q5VT06 3117 aa11.14□□□□□ -0.63
TRBV6-1-201ENST00000390353 NFIXQ14938 502 aa11.14□□□□□ -0.63
TRBV6-1-201ENST00000390353 ZNF790Q6PG37 636 aa11.14□□□□□ -0.63
TRBV6-1-201ENST00000390353 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
TRBV6-1-201ENST00000390353 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
TRBV6-1-201ENST00000390353 H0YIN7 160 aa11.13□□□□□ -0.63
TRBV6-1-201ENST00000390353 SERPINB2P05120 415 aa11.13□□□□□ -0.63
TRBV6-1-201ENST00000390353 CANXP27824 592 aaKnown RBP11.13□□□□□ -0.63
TRBV6-1-201ENST00000390353 RBM46Q8TBY0 533 aaKnown RBP11.13□□□□□ -0.63
TRBV6-1-201ENST00000390353 FMNL2Q96PY5 1086 aa11.13□□□□□ -0.63
TRBV6-1-201ENST00000390353 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 NPHP1O15259 732 aa11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 CHRNA5P30532 468 aa11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 PDE6BP35913 854 aa11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 IL6STP40189 918 aaPredicted RBP11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 FSTL1Q12841 308 aa11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 TTLL6Q8N841 843 aa11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
TRBV6-1-201ENST00000390353 KCPQ6ZWJ8 1503 aa11.11□□□□□ -0.63
TRBV6-1-201ENST00000390353 NEFMP07197 916 aa11.11□□□□□ -0.63
TRBV6-1-201ENST00000390353 LMNB1P20700 586 aa11.11□□□□□ -0.63
TRBV6-1-201ENST00000390353 EIF5P55010 431 aaKnown RBP11.11□□□□□ -0.63
TRBV6-1-201ENST00000390353 HEG1Q9ULI3 1381 aa11.11□□□□□ -0.63
TRBV6-1-201ENST00000390353 BTBD11A6QL63 1104 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 PRKAR2BP31323 418 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 C2CD5Q86YS7 1000 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 IL17REQ8NFR9 667 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 ZNF496Q96IT1 587 aaPredicted RBP11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 SETDB2Q96T68 719 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 BRIP1Q9BX63 1249 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 ZNF330Q9Y3S2 320 aaPredicted RBP11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 CARMIL3Q8ND23 1372 aa11.1□□□□□ -0.63
TRBV6-1-201ENST00000390353 SCN11AQ9UI33 1791 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 CEMIPQ8WUJ3 1361 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 CNGB1Q14028 1251 aaPredicted RBP11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 IFFO2Q5TF58 517 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 BICDL1Q6ZP65 573 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 SMC1BQ8NDV3 1235 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 ZNF652Q9Y2D9 606 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 TJP1Q07157 1748 aa11.09□□□□□ -0.63
TRBV6-1-201ENST00000390353 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 RGL2O15211 777 aa11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 ST5P78524 1137 aa11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 DPY19L2Q6NUT2 758 aa11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 CNBD1Q8NA66 436 aa11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
TRBV6-1-201ENST00000390353 SNRPA1P09661 255 aaKnown RBP11.07□□□□□ -0.64
TRBV6-1-201ENST00000390353 VEGFAP15692 232 aaPredicted RBP11.07□□□□□ -0.64
TRBV6-1-201ENST00000390353 CLEC4GQ6UXB4 293 aa11.07□□□□□ -0.64
TRBV6-1-201ENST00000390353 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
TRBV6-1-201ENST00000390353 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
TRBV6-1-201ENST00000390353 ADAMTS7Q9UKP4 1686 aa11.07□□□□□ -0.64
TRBV6-1-201ENST00000390353 KIAA1551Q9HCM1 1747 aa11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 TBC1D9BQ66K14 1250 aa11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 DZIP3Q86Y13 1208 aaKnown RBP11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 CNKSR1Q969H4 720 aa11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 ZNF622Q969S3 477 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 PNNQ9H307 717 aaKnown RBP11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 RRAGCQ9HB90 399 aa11.06□□□□□ -0.64
TRBV6-1-201ENST00000390353 GLTPD2A6NH11 291 aa11.05□□□□□ -0.64
TRBV6-1-201ENST00000390353 PPP2R1AP30153 589 aa11.05□□□□□ -0.64
TRBV6-1-201ENST00000390353 STYK1Q6J9G0 422 aa11.05□□□□□ -0.64
TRBV6-1-201ENST00000390353 PRR5LQ6MZQ0 368 aa11.05□□□□□ -0.64
TRBV6-1-201ENST00000390353 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
TRBV6-1-201ENST00000390353 PHACTR3Q96KR7 559 aa11.05□□□□□ -0.64
TRBV6-1-201ENST00000390353 A1BGP04217 495 aa11.04□□□□□ -0.64
TRBV6-1-201ENST00000390353 RASSF7Q02833 373 aa11.04□□□□□ -0.64
TRBV6-1-201ENST00000390353 TPTE2Q6XPS3 522 aa11.04□□□□□ -0.64
TRBV6-1-201ENST00000390353 NBPF5PQ86XG9 351 aaPredicted RBP11.04□□□□□ -0.64
TRBV6-1-201ENST00000390353 TAOK3Q9H2K8 898 aa11.04□□□□□ -0.64
TRBV6-1-201ENST00000390353 LTBP3Q9NS15 1303 aa11.04□□□□□ -0.64
TRBV6-1-201ENST00000390353 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
TRBV6-1-201ENST00000390353 CAMTA2O94983 1202 aa11.03□□□□□ -0.64
TRBV6-1-201ENST00000390353 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
TRBV6-1-201ENST00000390353 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
TRBV6-1-201ENST00000390353 MASTLQ96GX5 879 aa11.03□□□□□ -0.64
TRBV6-1-201ENST00000390353 NFKBIEO00221 500 aa11.02□□□□□ -0.65
TRBV6-1-201ENST00000390353 C21orf2O43822 256 aa11.02□□□□□ -0.65
TRBV6-1-201ENST00000390353 MCM10Q7L590 875 aa11.02□□□□□ -0.65
TRBV6-1-201ENST00000390353 DNAJC5GQ8N7S2 189 aa11.02□□□□□ -0.65
TRBV6-1-201ENST00000390353 KLRG1Q96E93 195 aa11.02□□□□□ -0.65
TRBV6-1-201ENST00000390353 UBR2Q8IWV8 1755 aa11.02□□□□□ -0.65
TRBV6-1-201ENST00000390353 SRGNP10124 158 aa11.01□□□□□ -0.65
TRBV6-1-201ENST00000390353 NPR1P16066 1061 aa11.01□□□□□ -0.65
TRBV6-1-201ENST00000390353 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
TRBV6-1-201ENST00000390353 PRPF40BQ6NWY9 871 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms