RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 CNTRLQ7Z7A1 2325 aa14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 FAM193AP78312 1265 aa14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 PTCD1O75127 700 aaKnown RBP14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 LRRFIP2Q9Y608 721 aaKnown RBP14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 SLFN5Q08AF3 891 aa14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 RPAP2Q8IXW5 612 aaPredicted RBP14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 TSPOAP1O95153 1857 aa14.35□□□□□ -0.11
KCNQ3-201ENST00000388996 ABCC5O15440 1437 aa14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 CTCFLQ8NI51 663 aaPredicted RBP14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 CCDC96Q2M329 555 aa14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 MAP3K12Q12852 859 aa14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 VPS36Q86VN1 386 aa14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 MPNDQ8N594 471 aa14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 SFPQP23246 707 aaKnown RBP eCLIP14.34□□□□□ -0.11
KCNQ3-201ENST00000388996 ANKRD62A6NC57 917 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 KIF2AO00139 706 aaPredicted RBP14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 CFAP100Q494V2 611 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 SYCE3A1L190 88 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 CUL5Q93034 780 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 NEBLO76041 1014 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 SCAND2PQ9GZW5 306 aaPredicted RBP14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 TAX1BP1Q86VP1 789 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 TSG101Q99816 390 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 SMARCA5O60264 1052 aaPredicted RBP14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 ASXL1Q8IXJ9 1541 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 NOS1P29475 1434 aa14.33□□□□□ -0.12
KCNQ3-201ENST00000388996 USHBP1Q8N6Y0 703 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 MYD88Q99836 296 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 MINDY4BA8MYZ0 360 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 TMEM266Q2M3C6 531 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 SCLT1Q96NL6 688 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 SLC12A7Q9Y666 1083 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 C8orf76Q96K31 380 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 RAB34Q9BZG1 259 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
KCNQ3-201ENST00000388996 DIDO1Q9BTC0 2240 aaKnown RBP14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 FGFR1OPO95684 399 aaKnown RBP14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 DNAAF4Q8WXU2 420 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 RNF41Q9H4P4 317 aaPredicted RBP14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 KDM5AP29375 1690 aaKnown RBP14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 SPA17Q15506 151 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 CCDC148Q8NFR7 591 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 EHMT1Q9H9B1 1298 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 MKNK2Q9HBH9 465 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 CAMK4Q16566 473 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 NME9Q86XW9 330 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 WAPLQ7Z5K2 1190 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 A0A087WZG4 1122 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 HMGB1P09429 215 aaKnown RBP14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 CATIPQ7Z7H3 387 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 AK9Q5TCS8 1911 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 MCM4P33991 863 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 PTPRCP08575 1304 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 CROCCQ5TZA2 2017 aa14.31□□□□□ -0.12
KCNQ3-201ENST00000388996 FKBP15Q5T1M5 1219 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 CCDC150Q8NCX0 1101 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 KNL1Q8NG31 2342 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 UQCRHLA0A096LP55 91 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 UQCRHP07919 91 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 ANKRD18BA2A2Z9 1011 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 CETN2P41208 172 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 WDHD1O75717 1129 aaPredicted RBP14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 PHF8Q9UPP1 1060 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 MPRIPQ6WCQ1 1025 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 BOLA2Q9H3K6 86 aa14.3□□□□□ -0.12
KCNQ3-201ENST00000388996 DENND4BO75064 1496 aaPredicted RBP14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 FERMT3Q86UX7 667 aa14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 UBA5Q9GZZ9 404 aa14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 KIF5BP33176 963 aa14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 SYCP2Q9BX26 1530 aa14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 WASLO00401 505 aaPredicted RBP14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 KLHL10Q6JEL2 608 aa14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 TRMT112Q9UI30 125 aaKnown RBP14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
KCNQ3-201ENST00000388996 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 MYO5CQ9NQX4 1742 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 FILIP1Q7Z7B0 1213 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 FEZ1Q99689 392 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 TTLL12Q14166 644 aaPredicted RBP14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 ATRXP46100 2492 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 CCDC83Q8IWF9 413 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 IQCA1Q86XH1 822 aa14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 DHX29Q7Z478 1369 aaKnown RBP14.28□□□□□ -0.12
KCNQ3-201ENST00000388996 SSRP1Q08945 709 aaKnown RBP14.27□□□□□ -0.12
KCNQ3-201ENST00000388996 TTF1Q15361 905 aaPredicted RBP14.27□□□□□ -0.12
KCNQ3-201ENST00000388996 CCDC12Q8WUD4 166 aaPredicted RBP14.27□□□□□ -0.13
KCNQ3-201ENST00000388996 ANAPC15P60006 121 aa14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 MAP9Q49MG5 647 aa14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 LIMCH1Q9UPQ0 1083 aa14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 TEX14Q8IWB6 1497 aa14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 IBSPP21815 317 aaPredicted RBP14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 SPTY2D1Q68D10 685 aaPredicted RBP14.26□□□□□ -0.13
KCNQ3-201ENST00000388996 INCENPQ9NQS7 918 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms