RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 UBR2Q8IWV8 1755 aa24.16■■□□□ 1.46
RPUSD3-201ENST00000383820 COL15A1P39059 1388 aa24.16■■□□□ 1.46
RPUSD3-201ENST00000383820 TOMM70O94826 608 aa24.15■■□□□ 1.46
RPUSD3-201ENST00000383820 COL3A1P02461 1466 aaPredicted RBP24.14■■□□□ 1.46
RPUSD3-201ENST00000383820 C9orf131Q5VYM1 1079 aa24.14■■□□□ 1.45
RPUSD3-201ENST00000383820 ZBTB1Q9Y2K1 713 aa24.14■■□□□ 1.45
RPUSD3-201ENST00000383820 NRXN2Q9P2S2 1712 aa24.13■■□□□ 1.45
RPUSD3-201ENST00000383820 CHRNA5P30532 468 aa24.12■■□□□ 1.45
RPUSD3-201ENST00000383820 NFIXQ14938 502 aa24.11■■□□□ 1.45
RPUSD3-201ENST00000383820 TTC5Q8N0Z6 440 aa24.11■■□□□ 1.45
RPUSD3-201ENST00000383820 GAS2L2Q8NHY3 880 aa24.11■■□□□ 1.45
RPUSD3-201ENST00000383820 AFDNP55196 1824 aaKnown RBP24.11■■□□□ 1.45
RPUSD3-201ENST00000383820 STARD3NLO95772 234 aa24.1■■□□□ 1.45
RPUSD3-201ENST00000383820 NMRK2Q9NPI5 230 aa24.1■■□□□ 1.45
RPUSD3-201ENST00000383820 APLP1P51693 650 aa24.09■■□□□ 1.45
RPUSD3-201ENST00000383820 BCL2L12Q9HB09 334 aa24.09■■□□□ 1.45
RPUSD3-201ENST00000383820 GNAT3A8MTJ3 354 aa24.08■■□□□ 1.45
RPUSD3-201ENST00000383820 U2SURPO15042 1029 aaKnown RBP24.08■■□□□ 1.45
RPUSD3-201ENST00000383820 TEFQ10587 303 aa24.08■■□□□ 1.45
RPUSD3-201ENST00000383820 TEX13AQ9BXU3 409 aaPredicted RBP24.08■■□□□ 1.45
RPUSD3-201ENST00000383820 RNF181Q9P0P0 153 aa24.08■■□□□ 1.45
RPUSD3-201ENST00000383820 DLEC1Q9Y238 1755 aa24.07■■□□□ 1.44
RPUSD3-201ENST00000383820 A0A087WZG4 1122 aa24.07■■□□□ 1.44
RPUSD3-201ENST00000383820 SERPINB2P05120 415 aa24.07■■□□□ 1.44
RPUSD3-201ENST00000383820 EIF5P55010 431 aaKnown RBP24.07■■□□□ 1.44
RPUSD3-201ENST00000383820 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
RPUSD3-201ENST00000383820 SBF1O95248 1867 aa24.07■■□□□ 1.44
RPUSD3-201ENST00000383820 SIPA1L3O60292 1781 aaPredicted RBP24.06■■□□□ 1.44
RPUSD3-201ENST00000383820 CANXP27824 592 aaKnown RBP24.06■■□□□ 1.44
RPUSD3-201ENST00000383820 ZNF790Q6PG37 636 aa24.06■■□□□ 1.44
RPUSD3-201ENST00000383820 IL17REQ8NFR9 667 aa24.06■■□□□ 1.44
RPUSD3-201ENST00000383820 RBM46Q8TBY0 533 aaKnown RBP24.06■■□□□ 1.44
RPUSD3-201ENST00000383820 HEG1Q9ULI3 1381 aa24.05■■□□□ 1.44
RPUSD3-201ENST00000383820 IFFO2Q5TF58 517 aa24.05■■□□□ 1.44
RPUSD3-201ENST00000383820 ZC3H4Q9UPT8 1303 aaKnown RBP24.05■■□□□ 1.44
RPUSD3-201ENST00000383820 ZNF496Q96IT1 587 aaPredicted RBP24.04■■□□□ 1.44
RPUSD3-201ENST00000383820 C16orf71Q8IYS4 520 aaPredicted RBP24.03■■□□□ 1.44
RPUSD3-201ENST00000383820 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
RPUSD3-201ENST00000383820 TTLL6Q8N841 843 aa24.02■■□□□ 1.44
RPUSD3-201ENST00000383820 TNRC6CQ9HCJ0 1690 aaKnown RBP24.02■■□□□ 1.44
RPUSD3-201ENST00000383820 CFAP53Q96M91 514 aa24.01■■□□□ 1.43
RPUSD3-201ENST00000383820 FMNL2Q96PY5 1086 aa24.01■■□□□ 1.43
RPUSD3-201ENST00000383820 PDZRN3Q9UPQ7 1066 aa24.01■■□□□ 1.43
RPUSD3-201ENST00000383820 SCN7AQ01118 1682 aa24.01■■□□□ 1.43
RPUSD3-201ENST00000383820 IL6STP40189 918 aaPredicted RBP24■■□□□ 1.43
RPUSD3-201ENST00000383820 FSTL1Q12841 308 aa24■■□□□ 1.43
RPUSD3-201ENST00000383820 C2CD5Q86YS7 1000 aa24■■□□□ 1.43
RPUSD3-201ENST00000383820 H0YIN7 160 aa23.99■■□□□ 1.43
RPUSD3-201ENST00000383820 LMNB1P20700 586 aa23.99■■□□□ 1.43
RPUSD3-201ENST00000383820 CNGB1Q14028 1251 aaPredicted RBP23.99■■□□□ 1.43
RPUSD3-201ENST00000383820 BICDL1Q6ZP65 573 aa23.98■■□□□ 1.43
RPUSD3-201ENST00000383820 DNAJC5GQ8N7S2 189 aa23.98■■□□□ 1.43
RPUSD3-201ENST00000383820 RSPH6AQ9H0K4 717 aa23.98■■□□□ 1.43
RPUSD3-201ENST00000383820 CARMIL3Q8ND23 1372 aa23.98■■□□□ 1.43
RPUSD3-201ENST00000383820 PRKAR2BP31323 418 aa23.97■■□□□ 1.43
RPUSD3-201ENST00000383820 RASSF7Q02833 373 aa23.97■■□□□ 1.43
RPUSD3-201ENST00000383820 TBC1D9BQ66K14 1250 aa23.97■■□□□ 1.43
RPUSD3-201ENST00000383820 NUDCQ9Y266 331 aa23.97■■□□□ 1.43
RPUSD3-201ENST00000383820 WDR90Q96KV7 1748 aa23.96■■□□□ 1.43
RPUSD3-201ENST00000383820 NPM2Q86SE8 214 aaKnown RBP23.96■■□□□ 1.43
RPUSD3-201ENST00000383820 PHACTR3Q96KR7 559 aa23.96■■□□□ 1.43
RPUSD3-201ENST00000383820 BRIP1Q9BX63 1249 aa23.96■■□□□ 1.43
RPUSD3-201ENST00000383820 RRAGCQ9HB90 399 aa23.96■■□□□ 1.43
RPUSD3-201ENST00000383820 BTBD11A6QL63 1104 aa23.95■■□□□ 1.42
RPUSD3-201ENST00000383820 PDE6BP35913 854 aa23.95■■□□□ 1.42
RPUSD3-201ENST00000383820 TBC1D2BQ9UPU7 963 aa23.95■■□□□ 1.42
RPUSD3-201ENST00000383820 ANKRD31Q8N7Z5 1873 aa23.95■■□□□ 1.42
RPUSD3-201ENST00000383820 ZNF330Q9Y3S2 320 aaPredicted RBP23.94■■□□□ 1.42
RPUSD3-201ENST00000383820 A1BGP04217 495 aa23.93■■□□□ 1.42
RPUSD3-201ENST00000383820 PRR5LQ6MZQ0 368 aa23.93■■□□□ 1.42
RPUSD3-201ENST00000383820 GLTPD2A6NH11 291 aa23.92■■□□□ 1.42
RPUSD3-201ENST00000383820 PRELPP51888 382 aa23.92■■□□□ 1.42
RPUSD3-201ENST00000383820 NFKBIEO00221 500 aa23.91■■□□□ 1.42
RPUSD3-201ENST00000383820 CAMTA2O94983 1202 aa23.91■■□□□ 1.42
RPUSD3-201ENST00000383820 SETDB2Q96T68 719 aa23.91■■□□□ 1.42
RPUSD3-201ENST00000383820 BCORQ6W2J9 1755 aa23.91■■□□□ 1.42
RPUSD3-201ENST00000383820 TIAM2Q8IVF5 1701 aa23.9■■□□□ 1.42
RPUSD3-201ENST00000383820 CCDC88AQ3V6T2 1871 aa23.9■■□□□ 1.42
RPUSD3-201ENST00000383820 KCNQ3O43525 872 aa23.9■■□□□ 1.42
RPUSD3-201ENST00000383820 SMC1BQ8NDV3 1235 aa23.9■■□□□ 1.42
RPUSD3-201ENST00000383820 RTF1Q92541 710 aaKnown RBP23.9■■□□□ 1.42
RPUSD3-201ENST00000383820 ZNF622Q969S3 477 aaKnown RBP eCLIP23.9■■□□□ 1.42
RPUSD3-201ENST00000383820 U2AF1L5P0DN76 240 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-201ENST00000383820 VEGFAP15692 232 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-201ENST00000383820 PPP2R1AP30153 589 aa23.89■■□□□ 1.41
RPUSD3-201ENST00000383820 U2AF1Q01081 240 aaKnown RBP eCLIP23.89■■□□□ 1.41
RPUSD3-201ENST00000383820 DZIP3Q86Y13 1208 aaKnown RBP23.89■■□□□ 1.41
RPUSD3-201ENST00000383820 COL11A2P13942 1736 aaPredicted RBP23.89■■□□□ 1.41
RPUSD3-201ENST00000383820 HTATSF1O43719 755 aaKnown RBP23.88■■□□□ 1.41
RPUSD3-201ENST00000383820 CNBD1Q8NA66 436 aa23.88■■□□□ 1.41
RPUSD3-201ENST00000383820 USP16Q9Y5T5 823 aa23.88■■□□□ 1.41
RPUSD3-201ENST00000383820 SNRPA1P09661 255 aaKnown RBP23.87■■□□□ 1.41
RPUSD3-201ENST00000383820 CLEC4GQ6UXB4 293 aa23.87■■□□□ 1.41
RPUSD3-201ENST00000383820 FER1L6Q2WGJ9 1857 aa23.87■■□□□ 1.41
RPUSD3-201ENST00000383820 ST5P78524 1137 aa23.86■■□□□ 1.41
RPUSD3-201ENST00000383820 CNKSR1Q969H4 720 aa23.86■■□□□ 1.41
RPUSD3-201ENST00000383820 KLRG1Q96E93 195 aa23.86■■□□□ 1.41
RPUSD3-201ENST00000383820 LTBP3Q9NS15 1303 aa23.85■■□□□ 1.41
RPUSD3-201ENST00000383820 DICER1Q9UPY3 1922 aaKnown RBP23.85■■□□□ 1.41
RPUSD3-201ENST00000383820 RGL2O15211 777 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms