RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
MSR1-204ENST00000381998 CD163L1Q9NR16 1453 aa7.5□□□□□ -1.21
MSR1-204ENST00000381998 C6orf132Q5T0Z8 1188 aa7.5□□□□□ -1.21
MSR1-204ENST00000381998 FTSJ3Q8IY81 847 aaKnown RBP7.5□□□□□ -1.21
MSR1-204ENST00000381998 GGNBP2Q9H3C7 697 aa7.5□□□□□ -1.21
MSR1-204ENST00000381998 ATAD2Q6PL18 1390 aa7.5□□□□□ -1.21
MSR1-204ENST00000381998 COL9A1P20849 921 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 DZIP1LQ8IYY4 767 aaKnown RBP7.49□□□□□ -1.21
MSR1-204ENST00000381998 PPP1R1BQ9UD71 204 aaPredicted RBP7.49□□□□□ -1.21
MSR1-204ENST00000381998 TSPOAP1O95153 1857 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 FYB1O15117 783 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 TRIM27P14373 513 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 CDK19Q9BWU1 502 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 RRAGDQ9NQL2 400 aaPredicted RBP7.49□□□□□ -1.21
MSR1-204ENST00000381998 A2ML1A8K2U0 1454 aa7.49□□□□□ -1.21
MSR1-204ENST00000381998 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
MSR1-204ENST00000381998 MLECQ14165 292 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 SKIV2LQ15477 1246 aaKnown RBP7.48□□□□□ -1.21
MSR1-204ENST00000381998 C22orf23Q9BZE7 217 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 SMC4Q9NTJ3 1288 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 TERF2IPQ9NYB0 399 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 FAM198AQ9UFP1 575 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 ARHGEF40Q8TER5 1519 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 CLTCQ00610 1675 aaKnown RBP7.48□□□□□ -1.21
MSR1-204ENST00000381998 SPATA31D1Q6ZQQ2 1576 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 MCM4P33991 863 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
MSR1-204ENST00000381998 TYW1BQ6NUM6 668 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 APBB1IPQ7Z5R6 666 aaPredicted RBP7.48□□□□□ -1.21
MSR1-204ENST00000381998 ZNF710Q8N1W2 664 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 SSH1Q8WYL5 1049 aa7.48□□□□□ -1.21
MSR1-204ENST00000381998 GIGYF2Q6Y7W6 1299 aaKnown RBP7.47□□□□□ -1.21
MSR1-204ENST00000381998 ADGRB2O60241 1585 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 RIMS2Q9UQ26 1411 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 XRCC6P12956 609 aaKnown RBP eCLIP7.47□□□□□ -1.21
MSR1-204ENST00000381998 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
MSR1-204ENST00000381998 FOXD4L6Q3SYB3 417 aaPredicted RBP7.47□□□□□ -1.21
MSR1-204ENST00000381998 FOXD4L3Q6VB84 417 aaPredicted RBP7.47□□□□□ -1.21
MSR1-204ENST00000381998 WAPLQ7Z5K2 1190 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 ITPRIPQ8IWB1 547 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 PANK2Q9BZ23 570 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 SCUBE2Q9NQ36 999 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 CABP1Q9NZU7 370 aa7.47□□□□□ -1.21
MSR1-204ENST00000381998 COL3A1P02461 1466 aaPredicted RBP7.47□□□□□ -1.21
MSR1-204ENST00000381998 FSD2A1L4K1 749 aa7.46□□□□□ -1.21
MSR1-204ENST00000381998 RBM10P98175 930 aaKnown RBP7.46□□□□□ -1.21
MSR1-204ENST00000381998 HDAC1Q13547 482 aaPredicted RBP7.46□□□□□ -1.21
MSR1-204ENST00000381998 L1TD1Q5T7N2 865 aaKnown RBP7.46□□□□□ -1.21
MSR1-204ENST00000381998 ZDHHC16Q969W1 377 aa7.46□□□□□ -1.21
MSR1-204ENST00000381998 PCMTD1Q96MG8 357 aaPredicted RBP7.46□□□□□ -1.21
MSR1-204ENST00000381998 PLEKHF1Q96S99 279 aa7.46□□□□□ -1.21
MSR1-204ENST00000381998 ZNF330Q9Y3S2 320 aaPredicted RBP7.46□□□□□ -1.21
MSR1-204ENST00000381998 MED14O60244 1454 aa7.46□□□□□ -1.21
MSR1-204ENST00000381998 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
MSR1-204ENST00000381998 TMPOP42166 694 aaKnown RBP7.46□□□□□ -1.22
MSR1-204ENST00000381998 HDGFL2Q7Z4V5 671 aaPredicted RBP7.46□□□□□ -1.22
MSR1-204ENST00000381998 DLC1Q96QB1 1528 aa7.46□□□□□ -1.22
MSR1-204ENST00000381998 AMHR2Q16671 573 aa7.46□□□□□ -1.22
MSR1-204ENST00000381998 DOK7Q18PE1 504 aa7.46□□□□□ -1.22
MSR1-204ENST00000381998 ATF7IPQ6VMQ6 1270 aa7.46□□□□□ -1.22
MSR1-204ENST00000381998 NOB1Q9ULX3 412 aaKnown RBP7.46□□□□□ -1.22
MSR1-204ENST00000381998 CARNS1A5YM72 827 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 GOLGA6L3A6NEY3 463 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 CT47B1P0C2W7 299 aaPredicted RBP7.45□□□□□ -1.22
MSR1-204ENST00000381998 SMC5Q8IY18 1101 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 TMEM57Q8N5G2 664 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 EPAS1Q99814 870 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 DDX19BQ9UMR2 479 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 SMAPO00193 183 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 OS9Q13438 667 aaPredicted RBP7.45□□□□□ -1.22
MSR1-204ENST00000381998 ZBTB40Q9NUA8 1239 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 CHMP5Q9NZZ3 219 aa7.45□□□□□ -1.22
MSR1-204ENST00000381998 SETD1AO15047 1707 aaKnown RBP7.44□□□□□ -1.22
MSR1-204ENST00000381998 ZC3H6P61129 1189 aaKnown RBP7.44□□□□□ -1.22
MSR1-204ENST00000381998 METTL3Q86U44 580 aaKnown RBP7.44□□□□□ -1.22
MSR1-204ENST00000381998 NME8Q8N427 588 aa7.44□□□□□ -1.22
MSR1-204ENST00000381998 MORC4Q8TE76 937 aa7.44□□□□□ -1.22
MSR1-204ENST00000381998 PNPLA6Q8IY17 1366 aa7.44□□□□□ -1.22
MSR1-204ENST00000381998 METP08581 1390 aa7.44□□□□□ -1.22
MSR1-204ENST00000381998 ANKRD26Q9UPS8 1709 aa7.44□□□□□ -1.22
MSR1-204ENST00000381998 PROX2Q3B8N5 592 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 NRXN3Q9Y4C0 1643 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 DIAPH1O60610 1272 aaKnown RBP7.43□□□□□ -1.22
MSR1-204ENST00000381998 FBLN1P23142 703 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 DDIT3P35638 169 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.43□□□□□ -1.22
MSR1-204ENST00000381998 MARVELD3Q96A59 401 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 LNPKQ9C0E8 428 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 AXIN2Q9Y2T1 843 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 NCOA3Q9Y6Q9 1424 aa7.43□□□□□ -1.22
MSR1-204ENST00000381998 ZNF16P17020 682 aaPredicted RBP7.42□□□□□ -1.22
MSR1-204ENST00000381998 RIPK4P57078 832 aa7.42□□□□□ -1.22
MSR1-204ENST00000381998 NUCB1Q02818 461 aa7.42□□□□□ -1.22
MSR1-204ENST00000381998 HSCBQ8IWL3 235 aa7.42□□□□□ -1.22
MSR1-204ENST00000381998 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.42□□□□□ -1.22
MSR1-204ENST00000381998 CDCA7Q9BWT1 371 aaPredicted RBP7.42□□□□□ -1.22
MSR1-204ENST00000381998 TSKSQ9UJT2 592 aa7.42□□□□□ -1.22
MSR1-204ENST00000381998 ATP7BP35670 1465 aa7.42□□□□□ -1.22
MSR1-204ENST00000381998 WASLO00401 505 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms