RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CCT4P50991 539 aaKnown RBP10.96□□□□□ -0.65
GPNMB-202ENST00000381990 NUCB2P80303 420 aa10.96□□□□□ -0.65
GPNMB-202ENST00000381990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.65
GPNMB-202ENST00000381990 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.66
GPNMB-202ENST00000381990 FLIIQ13045 1269 aa10.96□□□□□ -0.66
GPNMB-202ENST00000381990 CHRNA2Q15822 529 aa10.96□□□□□ -0.66
GPNMB-202ENST00000381990 TBC1D9Q6ZT07 1266 aa10.96□□□□□ -0.66
GPNMB-202ENST00000381990 SIRT2Q8IXJ6 389 aa10.96□□□□□ -0.66
GPNMB-202ENST00000381990 DDX49Q9Y6V7 483 aaKnown RBP10.96□□□□□ -0.66
GPNMB-202ENST00000381990 BTBD11A6QL63 1104 aa10.95□□□□□ -0.66
GPNMB-202ENST00000381990 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
GPNMB-202ENST00000381990 HDGFL1Q5TGJ6 251 aa10.95□□□□□ -0.66
GPNMB-202ENST00000381990 CDC45O75419 566 aa10.95□□□□□ -0.66
GPNMB-202ENST00000381990 BAG4O95429 457 aaKnown RBP10.95□□□□□ -0.66
GPNMB-202ENST00000381990 RABEP1Q15276 862 aa10.95□□□□□ -0.66
GPNMB-202ENST00000381990 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
GPNMB-202ENST00000381990 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
GPNMB-202ENST00000381990 SIPA1L3O60292 1781 aaPredicted RBP10.95□□□□□ -0.66
GPNMB-202ENST00000381990 ANKRD45Q5TZF3 282 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 MAP7D2Q96T17 732 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 FKBP5Q13451 457 aaPredicted RBP10.94□□□□□ -0.66
GPNMB-202ENST00000381990 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 MEGF6O75095 1541 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 F6X3S4 739 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 CD2BP2O95400 341 aaKnown RBP10.94□□□□□ -0.66
GPNMB-202ENST00000381990 SLC4A10Q6U841 1118 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
GPNMB-202ENST00000381990 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
GPNMB-202ENST00000381990 NHSL1Q5SYE7 1610 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 KCNQ3O43525 872 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 SSFA2P28290 1259 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 MEIS3Q99687 375 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 CWC22Q9HCG8 908 aaKnown RBP10.93□□□□□ -0.66
GPNMB-202ENST00000381990 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 N4BP2Q86UW6 1770 aaPredicted RBP10.93□□□□□ -0.66
GPNMB-202ENST00000381990 SCN11AQ9UI33 1791 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
GPNMB-202ENST00000381990 ABCA3Q99758 1704 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 PKD1L3Q7Z443 1732 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 ZNF500O60304 480 aaPredicted RBP10.92□□□□□ -0.66
GPNMB-202ENST00000381990 PHKG2P15735 406 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 MCM5P33992 734 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 DCTPP1Q9H773 170 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 NOL7Q9UMY1 257 aaKnown RBP10.92□□□□□ -0.66
GPNMB-202ENST00000381990 HEG1Q9ULI3 1381 aa10.92□□□□□ -0.66
GPNMB-202ENST00000381990 CYP2E1P05181 493 aaPredicted RBP10.91□□□□□ -0.66
GPNMB-202ENST00000381990 EIF2S2P20042 333 aaKnown RBP10.91□□□□□ -0.66
GPNMB-202ENST00000381990 PDLIM2Q96JY6 352 aa10.91□□□□□ -0.66
GPNMB-202ENST00000381990 WDR17Q8IZU2 1322 aa10.91□□□□□ -0.66
GPNMB-202ENST00000381990 KDM6AO15550 1401 aaPredicted RBP10.91□□□□□ -0.66
GPNMB-202ENST00000381990 MTERF4Q7Z6M4 381 aaKnown RBP10.9□□□□□ -0.66
GPNMB-202ENST00000381990 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.66
GPNMB-202ENST00000381990 GNAI3P08754 354 aa10.9□□□□□ -0.66
GPNMB-202ENST00000381990 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
GPNMB-202ENST00000381990 ZSCAN23Q3MJ62 389 aa10.9□□□□□ -0.66
GPNMB-202ENST00000381990 PHAXQ9H814 394 aaKnown RBP10.9□□□□□ -0.66
GPNMB-202ENST00000381990 SLC52A2Q9HAB3 445 aa10.9□□□□□ -0.66
GPNMB-202ENST00000381990 CHPF2Q9P2E5 772 aa10.9□□□□□ -0.66
GPNMB-202ENST00000381990 COL5A2P05997 1499 aaPredicted RBP10.89□□□□□ -0.67
GPNMB-202ENST00000381990 HMMRO75330 724 aa10.89□□□□□ -0.67
GPNMB-202ENST00000381990 FOXD4L1Q9NU39 408 aa10.89□□□□□ -0.67
GPNMB-202ENST00000381990 DBF4Q9UBU7 674 aaPredicted RBP10.89□□□□□ -0.67
GPNMB-202ENST00000381990 GNAI2P04899 355 aa10.89□□□□□ -0.67
GPNMB-202ENST00000381990 DCAF5Q96JK2 942 aa10.89□□□□□ -0.67
GPNMB-202ENST00000381990 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
GPNMB-202ENST00000381990 LMBRD1Q9NUN5 540 aa10.89□□□□□ -0.67
GPNMB-202ENST00000381990 MRC1P22897 1456 aa10.89□□□□□ -0.67
GPNMB-202ENST00000381990 CYP27B1O15528 508 aa10.88□□□□□ -0.67
GPNMB-202ENST00000381990 ST18O60284 1047 aa10.88□□□□□ -0.67
GPNMB-202ENST00000381990 PARP4Q9UKK3 1724 aaKnown RBP10.88□□□□□ -0.67
GPNMB-202ENST00000381990 MCTP1Q6DN14 999 aa10.88□□□□□ -0.67
GPNMB-202ENST00000381990 CASC1Q6TDU7 716 aa10.88□□□□□ -0.67
GPNMB-202ENST00000381990 TOM1L2Q6ZVM7 507 aa10.88□□□□□ -0.67
GPNMB-202ENST00000381990 CAVIN1Q6NZI2 390 aaKnown RBP10.88□□□□□ -0.67
GPNMB-202ENST00000381990 ZNF790Q6PG37 636 aa10.88□□□□□ -0.67
GPNMB-202ENST00000381990 NFATC2IPQ8NCF5 419 aa10.87□□□□□ -0.67
GPNMB-202ENST00000381990 CARD10Q9BWT7 1032 aa10.87□□□□□ -0.67
GPNMB-202ENST00000381990 GSPT1P15170 499 aaKnown RBP10.87□□□□□ -0.67
GPNMB-202ENST00000381990 TTC22Q5TAA0 569 aa10.87□□□□□ -0.67
GPNMB-202ENST00000381990 PLEKHM2Q8IWE5 1019 aa10.87□□□□□ -0.67
GPNMB-202ENST00000381990 USP26Q9BXU7 913 aa10.87□□□□□ -0.67
GPNMB-202ENST00000381990 DNAAF4Q8WXU2 420 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 SRCIN1Q9C0H9 1055 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 USP44Q9H0E7 712 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 ZKSCAN5Q9Y2L8 839 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 PI4KAP2A4QPH2 592 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 PI4KAP1Q8N8J0 262 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 HYPKQ9NX55 129 aa10.86□□□□□ -0.67
GPNMB-202ENST00000381990 PCDH11XQ9BZA7 1347 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 PCDH11YQ9BZA8 1340 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 MBD3O95983 291 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 ANXA1P04083 346 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 UBTFL1P0CB47 393 aaPredicted RBP10.85□□□□□ -0.67
GPNMB-202ENST00000381990 ZCRB1Q8TBF4 217 aaKnown RBP10.85□□□□□ -0.67
GPNMB-202ENST00000381990 CCDC39Q9UFE4 941 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
GPNMB-202ENST00000381990 REC8O95072 547 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms