RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SSH2Q76I76 1423 aa17.87■□□□□ 0.45
CTNS-202ENST00000381870 ABCC3O15438 1527 aa17.87■□□□□ 0.45
CTNS-202ENST00000381870 TYRO3Q06418 890 aa17.87■□□□□ 0.45
CTNS-202ENST00000381870 RUFY3Q7L099 469 aa17.87■□□□□ 0.45
CTNS-202ENST00000381870 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
CTNS-202ENST00000381870 ATP6V1DQ9Y5K8 247 aa17.87■□□□□ 0.45
CTNS-202ENST00000381870 CAPN2P17655 700 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 CEP135Q66GS9 1140 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 HDGFL2Q7Z4V5 671 aaPredicted RBP17.86■□□□□ 0.45
CTNS-202ENST00000381870 ZNF215Q9UL58 517 aaPredicted RBP17.86■□□□□ 0.45
CTNS-202ENST00000381870 ARAP3Q8WWN8 1544 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 RPGRIP1LQ68CZ1 1315 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 LARGE1O95461 756 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 IL13P35225 146 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 CACTINQ8WUQ7 758 aaKnown RBP17.86■□□□□ 0.45
CTNS-202ENST00000381870 TTC14Q96N46 770 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 TRIM5Q9C035 493 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 CBX8Q9HC52 389 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 FAM53CQ9NYF3 392 aa17.86■□□□□ 0.45
CTNS-202ENST00000381870 PDIA4P13667 645 aaKnown RBP17.85■□□□□ 0.45
CTNS-202ENST00000381870 ZNF75DP51815 510 aa17.85■□□□□ 0.45
CTNS-202ENST00000381870 RBM6P78332 1123 aaKnown RBP17.85■□□□□ 0.45
CTNS-202ENST00000381870 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
CTNS-202ENST00000381870 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
CTNS-202ENST00000381870 CKAP2LQ8IYA6 745 aa17.85■□□□□ 0.45
CTNS-202ENST00000381870 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.85■□□□□ 0.45
CTNS-202ENST00000381870 MAP3K11Q16584 847 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 FBXO38Q6PIJ6 1188 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 LRRCC1Q9C099 1032 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 MTMR6Q9Y217 621 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 TUBGCP6Q96RT7 1819 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 F6X3S4 739 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 CPA1P15085 419 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 LIG1P18858 919 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 CCDC144BQ3MJ40 725 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 PLA2G4DQ86XP0 818 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 CCDC144CPQ8IYA2 1237 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 KLHL34Q8N239 644 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 RTF1Q92541 710 aaKnown RBP17.84■□□□□ 0.45
CTNS-202ENST00000381870 SNX14Q9Y5W7 946 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 DLG5Q8TDM6 1919 aa17.84■□□□□ 0.45
CTNS-202ENST00000381870 USP27XA6NNY8 438 aa17.83■□□□□ 0.45
CTNS-202ENST00000381870 TRERF1Q96PN7 1200 aa17.83■□□□□ 0.45
CTNS-202ENST00000381870 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.45
CTNS-202ENST00000381870 NPATQ14207 1427 aa17.83■□□□□ 0.45
CTNS-202ENST00000381870 GJB2P29033 226 aa17.83■□□□□ 0.44
CTNS-202ENST00000381870 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
CTNS-202ENST00000381870 NUP62CLQ9H1M0 184 aa17.83■□□□□ 0.44
CTNS-202ENST00000381870 PTPRCP08575 1304 aa17.83■□□□□ 0.44
CTNS-202ENST00000381870 TULP2O00295 520 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 ELF2Q15723 593 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 CCDC83Q8IWF9 413 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 RASEFQ8IZ41 740 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 CALCOCO1Q9P1Z2 691 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 CPSF1Q10570 1443 aaKnown RBP17.82■□□□□ 0.44
CTNS-202ENST00000381870 MAP4K4O95819 1239 aaPredicted RBP17.82■□□□□ 0.44
CTNS-202ENST00000381870 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 RAD50Q92878 1312 aa17.82■□□□□ 0.44
CTNS-202ENST00000381870 VPS37CA5D8V6 355 aaPredicted RBP17.81■□□□□ 0.44
CTNS-202ENST00000381870 TTC6Q86TZ1 520 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 CLIP2Q9UDT6 1046 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 NEO1Q92859 1461 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 VGFO15240 615 aaPredicted RBP17.81■□□□□ 0.44
CTNS-202ENST00000381870 SLC20A2Q08357 652 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 ZNF446Q9NWS9 450 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
CTNS-202ENST00000381870 PNMA6EA0A0J9YXQ4 647 aa17.8■□□□□ 0.44
CTNS-202ENST00000381870 ARID5BQ14865 1188 aa17.8■□□□□ 0.44
CTNS-202ENST00000381870 G2E3Q7L622 706 aa17.8■□□□□ 0.44
CTNS-202ENST00000381870 LMTK2Q8IWU2 1503 aa17.8■□□□□ 0.44
CTNS-202ENST00000381870 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
CTNS-202ENST00000381870 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
CTNS-202ENST00000381870 ERBB3P21860 1342 aa17.8■□□□□ 0.44
CTNS-202ENST00000381870 NPHP1O15259 732 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 FAM173BQ6P4H8 233 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 GNAI2P04899 355 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 GGT6Q6P531 493 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.79■□□□□ 0.44
CTNS-202ENST00000381870 TNMDQ9H2S6 317 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 DACT1Q9NYF0 836 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
CTNS-202ENST00000381870 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
CTNS-202ENST00000381870 MAP2P11137 1827 aaKnown RBP17.78■□□□□ 0.44
CTNS-202ENST00000381870 MCM10Q7L590 875 aa17.78■□□□□ 0.44
CTNS-202ENST00000381870 PTPN14Q15678 1187 aa17.77■□□□□ 0.44
CTNS-202ENST00000381870 FERMT3Q86UX7 667 aa17.77■□□□□ 0.44
CTNS-202ENST00000381870 LRRC8AQ8IWT6 810 aa17.77■□□□□ 0.44
CTNS-202ENST00000381870 TDRD7Q8NHU6 1098 aaKnown RBP17.77■□□□□ 0.44
CTNS-202ENST00000381870 KIF1BPQ96EK5 621 aa17.77■□□□□ 0.44
CTNS-202ENST00000381870 CASTP20810 708 aaKnown RBP17.77■□□□□ 0.43
CTNS-202ENST00000381870 HNRNPH2P55795 449 aaKnown RBP17.77■□□□□ 0.43
CTNS-202ENST00000381870 NYAP1Q6ZVC0 841 aa17.77■□□□□ 0.43
CTNS-202ENST00000381870 ERO1AQ96HE7 468 aa17.77■□□□□ 0.43
CTNS-202ENST00000381870 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.43
CTNS-202ENST00000381870 TRIM34Q9BYJ4 488 aa17.77■□□□□ 0.43
CTNS-202ENST00000381870 IL1RAPL2Q9NP60 686 aa17.77■□□□□ 0.43
CTNS-202ENST00000381870 HYPKQ9NX55 129 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms