RNA–Protein interactions for RNA: ENST00000381810.7

LITAF-202, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-202ENST00000381810 SNRPA1P09661 255 aaKnown RBP21.12■□□□□ 0.97
LITAF-202ENST00000381810 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
LITAF-202ENST00000381810 TOGARAM1Q9Y4F4 1720 aa21.12■□□□□ 0.97
LITAF-202ENST00000381810 BEND3Q5T5X7 828 aa21.11■□□□□ 0.97
LITAF-202ENST00000381810 KSR2Q6VAB6 950 aa21.11■□□□□ 0.97
LITAF-202ENST00000381810 PDIA6Q15084 440 aa21.1■□□□□ 0.97
LITAF-202ENST00000381810 DDX54Q8TDD1 881 aaKnown RBP21.1■□□□□ 0.97
LITAF-202ENST00000381810 DISP2A7MBM2 1401 aa21.1■□□□□ 0.97
LITAF-202ENST00000381810 UBTFL1P0CB47 393 aaPredicted RBP21.09■□□□□ 0.97
LITAF-202ENST00000381810 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
LITAF-202ENST00000381810 NRAPQ86VF7 1730 aa21.09■□□□□ 0.97
LITAF-202ENST00000381810 TOM1O60784 492 aa21.09■□□□□ 0.97
LITAF-202ENST00000381810 DDX58O95786 925 aaKnown RBP21.09■□□□□ 0.97
LITAF-202ENST00000381810 ATP8B2P98198 1209 aa21.09■□□□□ 0.97
LITAF-202ENST00000381810 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
LITAF-202ENST00000381810 MAP3K2Q9Y2U5 619 aa21.09■□□□□ 0.97
LITAF-202ENST00000381810 LRRFIP2Q9Y608 721 aaKnown RBP21.09■□□□□ 0.97
LITAF-202ENST00000381810 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.96
LITAF-202ENST00000381810 ALDH1L1O75891 902 aa21.07■□□□□ 0.96
LITAF-202ENST00000381810 KCPQ6ZWJ8 1503 aa21.06■□□□□ 0.96
LITAF-202ENST00000381810 SEC24BO95487 1268 aa21.06■□□□□ 0.96
LITAF-202ENST00000381810 BMP2KLQ5H9B9 411 aa21.06■□□□□ 0.96
LITAF-202ENST00000381810 DDRGK1Q96HY6 314 aa21.06■□□□□ 0.96
LITAF-202ENST00000381810 ITGB4P16144 1822 aa21.06■□□□□ 0.96
LITAF-202ENST00000381810 USP16Q9Y5T5 823 aa21.05■□□□□ 0.96
LITAF-202ENST00000381810 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
LITAF-202ENST00000381810 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
LITAF-202ENST00000381810 NWD2Q9ULI1 1742 aa21.03■□□□□ 0.96
LITAF-202ENST00000381810 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
LITAF-202ENST00000381810 MYL6BP14649 208 aa21.03■□□□□ 0.96
LITAF-202ENST00000381810 PIP4K2BP78356 416 aa21.03■□□□□ 0.96
LITAF-202ENST00000381810 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
LITAF-202ENST00000381810 PLEKHM2Q8IWE5 1019 aa21.03■□□□□ 0.96
LITAF-202ENST00000381810 LRP6O75581 1613 aa21.02■□□□□ 0.96
LITAF-202ENST00000381810 ERBB4Q15303 1308 aa21.02■□□□□ 0.96
LITAF-202ENST00000381810 LRP10Q7Z4F1 713 aa21.02■□□□□ 0.96
LITAF-202ENST00000381810 LINS1Q8NG48 757 aa21.02■□□□□ 0.96
LITAF-202ENST00000381810 XAGE3Q8WTP9 111 aa21.02■□□□□ 0.96
LITAF-202ENST00000381810 UPF2Q9HAU5 1272 aaKnown RBP21.02■□□□□ 0.96
LITAF-202ENST00000381810 IBTKQ9P2D0 1353 aaPredicted RBP21.02■□□□□ 0.96
LITAF-202ENST00000381810 ARFGEF2Q9Y6D5 1785 aa21.01■□□□□ 0.95
LITAF-202ENST00000381810 ADAMTS2O95450 1211 aa21.01■□□□□ 0.95
LITAF-202ENST00000381810 NBPF7P0C2Y1 421 aaPredicted RBP21.01■□□□□ 0.95
LITAF-202ENST00000381810 SSH3Q8TE77 659 aa21.01■□□□□ 0.95
LITAF-202ENST00000381810 AFDNP55196 1824 aaKnown RBP21■□□□□ 0.95
LITAF-202ENST00000381810 APBB1O00213 710 aa21■□□□□ 0.95
LITAF-202ENST00000381810 SMARCA5O60264 1052 aaPredicted RBP21■□□□□ 0.95
LITAF-202ENST00000381810 ERICH6Q7L0X2 663 aa21■□□□□ 0.95
LITAF-202ENST00000381810 COPS6Q7L5N1 327 aa21■□□□□ 0.95
LITAF-202ENST00000381810 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
LITAF-202ENST00000381810 TMOD3Q9NYL9 352 aa21■□□□□ 0.95
LITAF-202ENST00000381810 HDAC5Q9UQL6 1122 aa21■□□□□ 0.95
LITAF-202ENST00000381810 POLA2Q14181 598 aa20.99■□□□□ 0.95
LITAF-202ENST00000381810 C16orf71Q8IYS4 520 aaPredicted RBP20.99■□□□□ 0.95
LITAF-202ENST00000381810 C9orf78Q9NZ63 289 aaPredicted RBP20.99■□□□□ 0.95
LITAF-202ENST00000381810 EXOC6BQ9Y2D4 811 aa20.99■□□□□ 0.95
LITAF-202ENST00000381810 PPP1R42Q7Z4L9 355 aa20.99■□□□□ 0.95
LITAF-202ENST00000381810 CWF19L2Q2TBE0 894 aaKnown RBP20.98■□□□□ 0.95
LITAF-202ENST00000381810 METTL22Q9BUU2 404 aaPredicted RBP20.98■□□□□ 0.95
LITAF-202ENST00000381810 UTYO14607 1347 aa20.97■□□□□ 0.95
LITAF-202ENST00000381810 UBAP1LF5GYI3 381 aa20.97■□□□□ 0.95
LITAF-202ENST00000381810 NEXNQ0ZGT2 675 aa20.97■□□□□ 0.95
LITAF-202ENST00000381810 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
LITAF-202ENST00000381810 CDCA7Q9BWT1 371 aaPredicted RBP20.97■□□□□ 0.95
LITAF-202ENST00000381810 NUTM2BA6NNL0 878 aaPredicted RBP20.96■□□□□ 0.95
LITAF-202ENST00000381810 NUTM2EB1AL46 878 aaPredicted RBP20.96■□□□□ 0.95
LITAF-202ENST00000381810 EXOC5O00471 708 aa20.96■□□□□ 0.95
LITAF-202ENST00000381810 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
LITAF-202ENST00000381810 NUTM2AQ8IVF1 878 aaPredicted RBP20.96■□□□□ 0.95
LITAF-202ENST00000381810 OTUD7AQ8TE49 926 aaPredicted RBP20.96■□□□□ 0.95
LITAF-202ENST00000381810 LRRCC1Q9C099 1032 aa20.96■□□□□ 0.95
LITAF-202ENST00000381810 THRAP3Q9Y2W1 955 aaKnown RBP20.96■□□□□ 0.95
LITAF-202ENST00000381810 SPATA31A1Q5TZJ5 1347 aa20.96■□□□□ 0.95
LITAF-202ENST00000381810 NUP188Q5SRE5 1749 aa20.96■□□□□ 0.95
LITAF-202ENST00000381810 GRM8O00222 908 aa20.95■□□□□ 0.94
LITAF-202ENST00000381810 IGKV5-2P06315 115 aa20.95■□□□□ 0.94
LITAF-202ENST00000381810 PIP4K2AP48426 406 aaPredicted RBP20.95■□□□□ 0.94
LITAF-202ENST00000381810 TBC1D32Q96NH3 1257 aa20.95■□□□□ 0.94
LITAF-202ENST00000381810 NBPF26B4DH59 902 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 SRGAP3O43295 1099 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 PTCD1O75127 700 aaKnown RBP20.94■□□□□ 0.94
LITAF-202ENST00000381810 RAB11FIP3O75154 756 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 GSPT1P15170 499 aaKnown RBP20.94■□□□□ 0.94
LITAF-202ENST00000381810 MTX1Q13505 466 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 NBPF14Q5TI25 921 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 NBPF10Q6P3W6 841 aaKnown RBP20.94■□□□□ 0.94
LITAF-202ENST00000381810 NBPF15Q8N660 670 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 PIGBQ92521 554 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 DOT1LQ8TEK3 1739 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 SLIT2O94813 1529 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 NEURL1BA8MQ27 555 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 MYD88Q99836 296 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 BCL11AQ9H165 835 aa20.94■□□□□ 0.94
LITAF-202ENST00000381810 TUBGCP6Q96RT7 1819 aa20.93■□□□□ 0.94
LITAF-202ENST00000381810 MFAP1P55081 439 aaKnown RBP20.93■□□□□ 0.94
LITAF-202ENST00000381810 PLBD2Q8NHP8 589 aa20.93■□□□□ 0.94
LITAF-202ENST00000381810 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
LITAF-202ENST00000381810 OSBPL3Q9H4L5 887 aa20.92■□□□□ 0.94
LITAF-202ENST00000381810 BCL9O00512 1426 aa20.92■□□□□ 0.94
LITAF-202ENST00000381810 CDC45O75419 566 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms