RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 GAS2L2Q8NHY3 880 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 CFAP53Q96M91 514 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 RSPH6AQ9H0K4 717 aa19.01■□□□□ 0.63
SHOX-202ENST00000381575 ZPR1O75312 459 aa19■□□□□ 0.63
SHOX-202ENST00000381575 TEFQ10587 303 aa19■□□□□ 0.63
SHOX-202ENST00000381575 TTC5Q8N0Z6 440 aa19■□□□□ 0.63
SHOX-202ENST00000381575 CANXP27824 592 aaKnown RBP18.99■□□□□ 0.63
SHOX-202ENST00000381575 ZNF496Q96IT1 587 aaPredicted RBP18.99■□□□□ 0.63
SHOX-202ENST00000381575 POLRMTO00411 1230 aaKnown RBP18.98■□□□□ 0.63
SHOX-202ENST00000381575 FCHSD2O94868 740 aa18.98■□□□□ 0.63
SHOX-202ENST00000381575 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
SHOX-202ENST00000381575 KCNA3P22001 575 aa18.97■□□□□ 0.63
SHOX-202ENST00000381575 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
SHOX-202ENST00000381575 GPBP1L1Q9HC44 474 aaPredicted RBP18.97■□□□□ 0.63
SHOX-202ENST00000381575 KCNQ3O43525 872 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 TM4SF1P30408 202 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 CHRNA5P30532 468 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 ZNF790Q6PG37 636 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 BCL2L12Q9HB09 334 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 DLG5Q8TDM6 1919 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 NRXN2Q9P2S2 1712 aa18.96■□□□□ 0.63
SHOX-202ENST00000381575 NFIXQ14938 502 aa18.95■□□□□ 0.62
SHOX-202ENST00000381575 ARHGAP27Q6ZUM4 889 aa18.95■□□□□ 0.62
SHOX-202ENST00000381575 NARFQ9UHQ1 456 aa18.95■□□□□ 0.62
SHOX-202ENST00000381575 ZNF330Q9Y3S2 320 aaPredicted RBP18.95■□□□□ 0.62
SHOX-202ENST00000381575 SCN7AQ01118 1682 aa18.95■□□□□ 0.62
SHOX-202ENST00000381575 CEMIPQ8WUJ3 1361 aa18.95■□□□□ 0.62
SHOX-202ENST00000381575 HEG1Q9ULI3 1381 aa18.95■□□□□ 0.62
SHOX-202ENST00000381575 NUDCQ9Y266 331 aa18.94■□□□□ 0.62
SHOX-202ENST00000381575 BICDL1Q6ZP65 573 aa18.93■□□□□ 0.62
SHOX-202ENST00000381575 MCM10Q7L590 875 aa18.93■□□□□ 0.62
SHOX-202ENST00000381575 STARD3NLO95772 234 aa18.93■□□□□ 0.62
SHOX-202ENST00000381575 DCTN1Q14203 1278 aa18.93■□□□□ 0.62
SHOX-202ENST00000381575 DLEC1Q9Y238 1755 aa18.92■□□□□ 0.62
SHOX-202ENST00000381575 SBF1O95248 1867 aa18.92■□□□□ 0.62
SHOX-202ENST00000381575 BTBD11A6QL63 1104 aa18.92■□□□□ 0.62
SHOX-202ENST00000381575 EIF5P55010 431 aaKnown RBP18.92■□□□□ 0.62
SHOX-202ENST00000381575 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
SHOX-202ENST00000381575 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
SHOX-202ENST00000381575 CARMIL3Q8ND23 1372 aa18.91■□□□□ 0.62
SHOX-202ENST00000381575 A1BGP04217 495 aa18.91■□□□□ 0.62
SHOX-202ENST00000381575 PIP4K2AP48426 406 aaPredicted RBP18.91■□□□□ 0.62
SHOX-202ENST00000381575 DALRD3Q5D0E6 543 aaKnown RBP18.91■□□□□ 0.62
SHOX-202ENST00000381575 FMNL2Q96PY5 1086 aa18.91■□□□□ 0.62
SHOX-202ENST00000381575 PRAMEF22A3QJZ6 481 aa18.9■□□□□ 0.62
SHOX-202ENST00000381575 SERPINB2P05120 415 aa18.9■□□□□ 0.62
SHOX-202ENST00000381575 TBC1D2BQ9UPU7 963 aa18.9■□□□□ 0.62
SHOX-202ENST00000381575 BCORQ6W2J9 1755 aa18.9■□□□□ 0.62
SHOX-202ENST00000381575 CCDC88AQ3V6T2 1871 aa18.89■□□□□ 0.61
SHOX-202ENST00000381575 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
SHOX-202ENST00000381575 TBC1D9BQ66K14 1250 aa18.88■□□□□ 0.61
SHOX-202ENST00000381575 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
SHOX-202ENST00000381575 RTF1Q92541 710 aaKnown RBP18.88■□□□□ 0.61
SHOX-202ENST00000381575 COL11A2P13942 1736 aaPredicted RBP18.88■□□□□ 0.61
SHOX-202ENST00000381575 C9orf131Q5VYM1 1079 aa18.87■□□□□ 0.61
SHOX-202ENST00000381575 A0A087WZG4 1122 aa18.86■□□□□ 0.61
SHOX-202ENST00000381575 TEX13AQ9BXU3 409 aaPredicted RBP18.86■□□□□ 0.61
SHOX-202ENST00000381575 USP16Q9Y5T5 823 aa18.86■□□□□ 0.61
SHOX-202ENST00000381575 KIF3CO14782 793 aa18.85■□□□□ 0.61
SHOX-202ENST00000381575 IL6STP40189 918 aaPredicted RBP18.84■□□□□ 0.61
SHOX-202ENST00000381575 RASSF7Q02833 373 aa18.84■□□□□ 0.61
SHOX-202ENST00000381575 MIS18AQ9NYP9 233 aa18.84■□□□□ 0.61
SHOX-202ENST00000381575 LAMB4A4D0S4 1761 aa18.84■□□□□ 0.61
SHOX-202ENST00000381575 KDM3BQ7LBC6 1761 aa18.84■□□□□ 0.61
SHOX-202ENST00000381575 C2CD5Q86YS7 1000 aa18.83■□□□□ 0.61
SHOX-202ENST00000381575 NMRK2Q9NPI5 230 aa18.83■□□□□ 0.61
SHOX-202ENST00000381575 RNF181Q9P0P0 153 aa18.83■□□□□ 0.61
SHOX-202ENST00000381575 CAMTA2O94983 1202 aa18.82■□□□□ 0.6
SHOX-202ENST00000381575 NPM2Q86SE8 214 aaKnown RBP18.81■□□□□ 0.6
SHOX-202ENST00000381575 DZIP3Q86Y13 1208 aaKnown RBP18.81■□□□□ 0.6
SHOX-202ENST00000381575 PRR5LQ6MZQ0 368 aa18.81■□□□□ 0.6
SHOX-202ENST00000381575 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
SHOX-202ENST00000381575 TIAM2Q8IVF5 1701 aa18.8■□□□□ 0.6
SHOX-202ENST00000381575 SNRPA1P09661 255 aaKnown RBP18.8■□□□□ 0.6
SHOX-202ENST00000381575 ZNF219Q9P2Y4 722 aaPredicted RBP18.8■□□□□ 0.6
SHOX-202ENST00000381575 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
SHOX-202ENST00000381575 H0YIN7 160 aa18.79■□□□□ 0.6
SHOX-202ENST00000381575 HTATSF1O43719 755 aaKnown RBP18.79■□□□□ 0.6
SHOX-202ENST00000381575 PRELPP51888 382 aa18.79■□□□□ 0.6
SHOX-202ENST00000381575 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
SHOX-202ENST00000381575 TTLL6Q8N841 843 aa18.79■□□□□ 0.6
SHOX-202ENST00000381575 PLEKHF1Q96S99 279 aa18.79■□□□□ 0.6
SHOX-202ENST00000381575 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
SHOX-202ENST00000381575 NPHP1O15259 732 aa18.78■□□□□ 0.6
SHOX-202ENST00000381575 NEFMP07197 916 aa18.78■□□□□ 0.6
SHOX-202ENST00000381575 NBPF10Q6P3W6 841 aaKnown RBP18.78■□□□□ 0.6
SHOX-202ENST00000381575 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
SHOX-202ENST00000381575 ZNF622Q969S3 477 aaKnown RBP eCLIP18.78■□□□□ 0.6
SHOX-202ENST00000381575 SETDB2Q96T68 719 aa18.78■□□□□ 0.6
SHOX-202ENST00000381575 HSPA6P17066 643 aa18.77■□□□□ 0.6
SHOX-202ENST00000381575 CNBD1Q8NA66 436 aa18.77■□□□□ 0.6
SHOX-202ENST00000381575 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.59
SHOX-202ENST00000381575 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
SHOX-202ENST00000381575 NFE2L2Q16236 605 aa18.76■□□□□ 0.59
SHOX-202ENST00000381575 NUP98P52948 1817 aa18.75■□□□□ 0.59
SHOX-202ENST00000381575 ARFGEF2Q9Y6D5 1785 aa18.75■□□□□ 0.59
SHOX-202ENST00000381575 DDX10Q13206 875 aaKnown RBP18.75■□□□□ 0.59
SHOX-202ENST00000381575 BRIP1Q9BX63 1249 aa18.75■□□□□ 0.59
SHOX-202ENST00000381575 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms