RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 TUBGCP6Q96RT7 1819 aa16.41■□□□□ 0.22
LCMT1-201ENST00000380962 SCN11AQ9UI33 1791 aa16.41■□□□□ 0.22
LCMT1-201ENST00000380962 ADCY9O60503 1353 aa16.41■□□□□ 0.22
LCMT1-201ENST00000380962 SPATA31A3Q5VYP0 1347 aa16.41■□□□□ 0.22
LCMT1-201ENST00000380962 K7ELQ4 463 aaPredicted RBP16.41■□□□□ 0.22
LCMT1-201ENST00000380962 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
LCMT1-201ENST00000380962 MTX1Q13505 466 aa16.41■□□□□ 0.22
LCMT1-201ENST00000380962 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
LCMT1-201ENST00000380962 ERC2O15083 957 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 KCNQ3O43525 872 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
LCMT1-201ENST00000380962 MX1P20591 662 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 PI4KAP2A4QPH2 592 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 KSR2Q6VAB6 950 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 PI4KAP1Q8N8J0 262 aa16.4■□□□□ 0.22
LCMT1-201ENST00000380962 PKD1L3Q7Z443 1732 aa16.39■□□□□ 0.22
LCMT1-201ENST00000380962 DDX58O95786 925 aaKnown RBP16.39■□□□□ 0.21
LCMT1-201ENST00000380962 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
LCMT1-201ENST00000380962 KIF1BPQ96EK5 621 aa16.39■□□□□ 0.21
LCMT1-201ENST00000380962 SLC52A2Q9HAB3 445 aa16.39■□□□□ 0.21
LCMT1-201ENST00000380962 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
LCMT1-201ENST00000380962 APBB1O00213 710 aa16.38■□□□□ 0.21
LCMT1-201ENST00000380962 PHKG2P15735 406 aa16.38■□□□□ 0.21
LCMT1-201ENST00000380962 PTMSP20962 102 aa16.38■□□□□ 0.21
LCMT1-201ENST00000380962 IFNL2Q8IZJ0 200 aa16.38■□□□□ 0.21
LCMT1-201ENST00000380962 PARP4Q9UKK3 1724 aaKnown RBP16.38■□□□□ 0.21
LCMT1-201ENST00000380962 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
LCMT1-201ENST00000380962 MCM4P33991 863 aa16.37■□□□□ 0.21
LCMT1-201ENST00000380962 PPP1R42Q7Z4L9 355 aa16.37■□□□□ 0.21
LCMT1-201ENST00000380962 NLRP2Q9NX02 1062 aa16.37■□□□□ 0.21
LCMT1-201ENST00000380962 UTYO14607 1347 aa16.36■□□□□ 0.21
LCMT1-201ENST00000380962 MEGF6O75095 1541 aa16.36■□□□□ 0.21
LCMT1-201ENST00000380962 IL17RAQ96F46 866 aa16.36■□□□□ 0.21
LCMT1-201ENST00000380962 USP42Q9H9J4 1324 aaKnown RBP16.36■□□□□ 0.21
LCMT1-201ENST00000380962 DDX11L8A8MPP1 907 aa16.35■□□□□ 0.21
LCMT1-201ENST00000380962 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
LCMT1-201ENST00000380962 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
LCMT1-201ENST00000380962 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
LCMT1-201ENST00000380962 XIRP1Q702N8 1843 aaKnown RBP16.34■□□□□ 0.21
LCMT1-201ENST00000380962 SRGAP3O43295 1099 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 ST18O60284 1047 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
LCMT1-201ENST00000380962 ANAPC15P60006 121 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 ERC1Q8IUD2 1116 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 RHPN1Q8TCX5 695 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 ESYT1Q9BSJ8 1104 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
LCMT1-201ENST00000380962 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
LCMT1-201ENST00000380962 CSB-PGBD3P0DP91 1061 aa16.33■□□□□ 0.2
LCMT1-201ENST00000380962 MCCP23508 829 aa16.33■□□□□ 0.2
LCMT1-201ENST00000380962 RAB3GAP1Q15042 981 aa16.33■□□□□ 0.2
LCMT1-201ENST00000380962 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
LCMT1-201ENST00000380962 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
LCMT1-201ENST00000380962 MCM2P49736 904 aa16.32■□□□□ 0.2
LCMT1-201ENST00000380962 LARP1Q6PKG0 1096 aaKnown RBP16.32■□□□□ 0.2
LCMT1-201ENST00000380962 GBP4Q96PP9 640 aa16.32■□□□□ 0.2
LCMT1-201ENST00000380962 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
LCMT1-201ENST00000380962 CHMLP26374 656 aa16.31■□□□□ 0.2
LCMT1-201ENST00000380962 PDIA6Q15084 440 aa16.31■□□□□ 0.2
LCMT1-201ENST00000380962 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
LCMT1-201ENST00000380962 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
LCMT1-201ENST00000380962 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
LCMT1-201ENST00000380962 SOS2Q07890 1332 aaPredicted RBP16.31■□□□□ 0.2
LCMT1-201ENST00000380962 ERBB4Q15303 1308 aa16.31■□□□□ 0.2
LCMT1-201ENST00000380962 COL15A1P39059 1388 aa16.3■□□□□ 0.2
LCMT1-201ENST00000380962 CD2BP2O95400 341 aaKnown RBP16.3■□□□□ 0.2
LCMT1-201ENST00000380962 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
LCMT1-201ENST00000380962 PROSER3Q2NL68 480 aa16.3■□□□□ 0.2
LCMT1-201ENST00000380962 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
LCMT1-201ENST00000380962 SPRYD3Q8NCJ5 442 aa16.3■□□□□ 0.2
LCMT1-201ENST00000380962 RBM42Q9BTD8 480 aaKnown RBP16.29■□□□□ 0.2
LCMT1-201ENST00000380962 C5P01031 1676 aa16.29■□□□□ 0.2
LCMT1-201ENST00000380962 GRM8O00222 908 aa16.29■□□□□ 0.2
LCMT1-201ENST00000380962 ANXA1P04083 346 aa16.29■□□□□ 0.2
LCMT1-201ENST00000380962 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
LCMT1-201ENST00000380962 FMNL2Q96PY5 1086 aa16.29■□□□□ 0.2
LCMT1-201ENST00000380962 WDR17Q8IZU2 1322 aa16.28■□□□□ 0.2
LCMT1-201ENST00000380962 TRIM6-TRIM34B2RNG4 842 aa16.28■□□□□ 0.2
LCMT1-201ENST00000380962 NEXNQ0ZGT2 675 aa16.28■□□□□ 0.2
LCMT1-201ENST00000380962 TTC5Q8N0Z6 440 aa16.28■□□□□ 0.2
LCMT1-201ENST00000380962 CNTROBQ8N137 903 aa16.28■□□□□ 0.2
LCMT1-201ENST00000380962 DDX17Q92841 729 aaKnown RBP16.28■□□□□ 0.2
LCMT1-201ENST00000380962 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
LCMT1-201ENST00000380962 CYP27B1O15528 508 aa16.27■□□□□ 0.2
LCMT1-201ENST00000380962 GLRX3O76003 335 aaKnown RBP16.27■□□□□ 0.2
LCMT1-201ENST00000380962 PLEKHG5O94827 1062 aa16.27■□□□□ 0.2
LCMT1-201ENST00000380962 NUCB2P80303 420 aa16.27■□□□□ 0.2
LCMT1-201ENST00000380962 CLASRPQ8N2M8 674 aaKnown RBP16.27■□□□□ 0.2
LCMT1-201ENST00000380962 NFATC2IPQ8NCF5 419 aa16.27■□□□□ 0.2
LCMT1-201ENST00000380962 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
LCMT1-201ENST00000380962 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
LCMT1-201ENST00000380962 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.19
LCMT1-201ENST00000380962 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.19
LCMT1-201ENST00000380962 SKOR2Q2VWA4 1001 aaPredicted RBP16.26■□□□□ 0.19
LCMT1-201ENST00000380962 L1TD1Q5T7N2 865 aaKnown RBP16.26■□□□□ 0.19
LCMT1-201ENST00000380962 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
LCMT1-201ENST00000380962 RILPL2Q969X0 211 aa16.26■□□□□ 0.19
LCMT1-201ENST00000380962 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
LCMT1-201ENST00000380962 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms