RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 NOL8Q76FK4 1167 aaKnown RBP19.81■□□□□ 0.76
VPS16-203ENST00000380469 RHPN1Q8TCX5 695 aa19.81■□□□□ 0.76
VPS16-203ENST00000380469 MBD3O95983 291 aa19.8■□□□□ 0.76
VPS16-203ENST00000380469 RBM27Q9P2N5 1060 aaKnown RBP19.8■□□□□ 0.76
VPS16-203ENST00000380469 HSP90AB4PQ58FF6 505 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 DNAAF4Q8WXU2 420 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 HSPA4P34932 840 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 PRIM1P49642 420 aaKnown RBP19.79■□□□□ 0.76
VPS16-203ENST00000380469 NBPF6Q5VWK0 638 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 NBPF4Q96M43 638 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 RBSNQ9H1K0 784 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 LGR6Q9HBX8 967 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 CHPF2Q9P2E5 772 aa19.79■□□□□ 0.76
VPS16-203ENST00000380469 FER1L4A9Z1Z3 1794 aa19.78■□□□□ 0.76
VPS16-203ENST00000380469 UPF3BQ9BZI7 483 aaKnown RBP19.78■□□□□ 0.76
VPS16-203ENST00000380469 TEFQ10587 303 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 BEND3Q5T5X7 828 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 CNTROBQ8N137 903 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 LTN1O94822 1766 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.76
VPS16-203ENST00000380469 NBPF7P0C2Y1 421 aaPredicted RBP19.77■□□□□ 0.76
VPS16-203ENST00000380469 LRSAM1Q6UWE0 723 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 ZSCAN30Q86W11 494 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 PI4K2BQ8TCG2 481 aa19.77■□□□□ 0.76
VPS16-203ENST00000380469 CHAMP1Q96JM3 812 aa19.76■□□□□ 0.75
VPS16-203ENST00000380469 ZBTB7CA1YPR0 619 aa19.76■□□□□ 0.75
VPS16-203ENST00000380469 BTBD11A6QL63 1104 aa19.76■□□□□ 0.75
VPS16-203ENST00000380469 KCNH5Q8NCM2 988 aa19.76■□□□□ 0.75
VPS16-203ENST00000380469 TMEM63CQ9P1W3 806 aa19.76■□□□□ 0.75
VPS16-203ENST00000380469 AKAP4Q5JQC9 854 aa19.75■□□□□ 0.75
VPS16-203ENST00000380469 SGSM2O43147 1006 aa19.75■□□□□ 0.75
VPS16-203ENST00000380469 PSME1Q06323 249 aa19.75■□□□□ 0.75
VPS16-203ENST00000380469 OS9Q13438 667 aaPredicted RBP19.75■□□□□ 0.75
VPS16-203ENST00000380469 PLEKHO1Q53GL0 409 aaPredicted RBP19.75■□□□□ 0.75
VPS16-203ENST00000380469 KIAA1211Q6ZU35 1233 aa19.75■□□□□ 0.75
VPS16-203ENST00000380469 MSNP26038 577 aaKnown RBP19.74■□□□□ 0.75
VPS16-203ENST00000380469 HS1BP3Q53T59 392 aa19.74■□□□□ 0.75
VPS16-203ENST00000380469 ZNF530Q6P9A1 599 aaPredicted RBP19.74■□□□□ 0.75
VPS16-203ENST00000380469 IL25Q9H293 177 aa19.74■□□□□ 0.75
VPS16-203ENST00000380469 MED1Q15648 1581 aaPredicted RBP19.74■□□□□ 0.75
VPS16-203ENST00000380469 SYCE3A1L190 88 aa19.74■□□□□ 0.75
VPS16-203ENST00000380469 RAD50Q92878 1312 aa19.74■□□□□ 0.75
VPS16-203ENST00000380469 WDR33Q9C0J8 1336 aaKnown RBP19.74■□□□□ 0.75
VPS16-203ENST00000380469 KCNQ3O43525 872 aa19.73■□□□□ 0.75
VPS16-203ENST00000380469 SYAP1Q96A49 352 aaPredicted RBP19.73■□□□□ 0.75
VPS16-203ENST00000380469 NSFL1CQ9UNZ2 370 aaKnown RBP19.73■□□□□ 0.75
VPS16-203ENST00000380469 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
VPS16-203ENST00000380469 DBF4Q9UBU7 674 aaPredicted RBP19.72■□□□□ 0.75
VPS16-203ENST00000380469 TTC41PQ6P2S7 1318 aa19.72■□□□□ 0.75
VPS16-203ENST00000380469 KDM3BQ7LBC6 1761 aa19.72■□□□□ 0.75
VPS16-203ENST00000380469 SETD1BQ9UPS6 1966 aaKnown RBP19.72■□□□□ 0.75
VPS16-203ENST00000380469 NFAT5O94916 1531 aa19.72■□□□□ 0.75
VPS16-203ENST00000380469 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
VPS16-203ENST00000380469 HDAC5Q9UQL6 1122 aa19.71■□□□□ 0.75
VPS16-203ENST00000380469 SNX14Q9Y5W7 946 aa19.71■□□□□ 0.75
VPS16-203ENST00000380469 GLRX3O76003 335 aaKnown RBP19.71■□□□□ 0.75
VPS16-203ENST00000380469 MPRIPQ6WCQ1 1025 aa19.71■□□□□ 0.75
VPS16-203ENST00000380469 LSG1Q9H089 658 aaKnown RBP19.71■□□□□ 0.75
VPS16-203ENST00000380469 ADGRL3Q9HAR2 1447 aa19.71■□□□□ 0.74
VPS16-203ENST00000380469 USP42Q9H9J4 1324 aaKnown RBP19.7■□□□□ 0.74
VPS16-203ENST00000380469 ANXA1P04083 346 aa19.7■□□□□ 0.74
VPS16-203ENST00000380469 ESCO1Q5FWF5 840 aa19.7■□□□□ 0.74
VPS16-203ENST00000380469 C1orf141Q5JVX7 400 aa19.7■□□□□ 0.74
VPS16-203ENST00000380469 PDLIM2Q96JY6 352 aa19.7■□□□□ 0.74
VPS16-203ENST00000380469 CWC27Q6UX04 472 aaKnown RBP19.7■□□□□ 0.74
VPS16-203ENST00000380469 CLASRPQ8N2M8 674 aaKnown RBP19.7■□□□□ 0.74
VPS16-203ENST00000380469 RUFY2Q8WXA3 655 aa19.7■□□□□ 0.74
VPS16-203ENST00000380469 C9orf78Q9NZ63 289 aaPredicted RBP19.7■□□□□ 0.74
VPS16-203ENST00000380469 ADCY9O60503 1353 aa19.69■□□□□ 0.74
VPS16-203ENST00000380469 ALDH1L1O75891 902 aa19.69■□□□□ 0.74
VPS16-203ENST00000380469 LRRC59Q96AG4 307 aaKnown RBP19.69■□□□□ 0.74
VPS16-203ENST00000380469 MTX1Q13505 466 aa19.69■□□□□ 0.74
VPS16-203ENST00000380469 GPATCH3Q96I76 525 aa19.69■□□□□ 0.74
VPS16-203ENST00000380469 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
VPS16-203ENST00000380469 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
VPS16-203ENST00000380469 RNMTO43148 476 aaKnown RBP19.68■□□□□ 0.74
VPS16-203ENST00000380469 PHF14O94880 888 aa19.68■□□□□ 0.74
VPS16-203ENST00000380469 ANKLE2Q86XL3 938 aa19.68■□□□□ 0.74
VPS16-203ENST00000380469 MAP3K2Q9Y2U5 619 aa19.68■□□□□ 0.74
VPS16-203ENST00000380469 ERC1Q8IUD2 1116 aa19.68■□□□□ 0.74
VPS16-203ENST00000380469 LIMCH1Q9UPQ0 1083 aa19.68■□□□□ 0.74
VPS16-203ENST00000380469 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.68■□□□□ 0.74
VPS16-203ENST00000380469 FOXD4L6Q3SYB3 417 aaPredicted RBP19.67■□□□□ 0.74
VPS16-203ENST00000380469 FOXD4L3Q6VB84 417 aaPredicted RBP19.67■□□□□ 0.74
VPS16-203ENST00000380469 TTC14Q96N46 770 aa19.67■□□□□ 0.74
VPS16-203ENST00000380469 KSR2Q6VAB6 950 aa19.67■□□□□ 0.74
VPS16-203ENST00000380469 USP48Q86UV5 1035 aa19.67■□□□□ 0.74
VPS16-203ENST00000380469 TSPY26PQ9H489 355 aa19.67■□□□□ 0.74
VPS16-203ENST00000380469 SPG7Q9UQ90 795 aa19.67■□□□□ 0.74
VPS16-203ENST00000380469 IFIT2P09913 472 aaKnown RBP19.66■□□□□ 0.74
VPS16-203ENST00000380469 AK2P54819 239 aa19.66■□□□□ 0.74
VPS16-203ENST00000380469 RASEFQ8IZ41 740 aa19.66■□□□□ 0.74
VPS16-203ENST00000380469 RBM33Q96EV2 1170 aaKnown RBP19.66■□□□□ 0.74
VPS16-203ENST00000380469 ECHDC1Q9NTX5 307 aa19.66■□□□□ 0.74
VPS16-203ENST00000380469 CHD2O14647 1828 aaKnown RBP19.66■□□□□ 0.74
VPS16-203ENST00000380469 NCAPD2Q15021 1401 aa19.66■□□□□ 0.74
VPS16-203ENST00000380469 NOL7Q9UMY1 257 aaKnown RBP19.65■□□□□ 0.74
VPS16-203ENST00000380469 GIGYF1O75420 1035 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms