RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 KIF2CQ99661 725 aa15.53■□□□□ 0.08
VPS16-202ENST00000380445 SIPA1L3O60292 1781 aaPredicted RBP15.52■□□□□ 0.08
VPS16-202ENST00000380445 ALDH1L1O75891 902 aa15.52■□□□□ 0.07
VPS16-202ENST00000380445 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.07
VPS16-202ENST00000380445 CPDO75976 1380 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 COL18A1P39060 1754 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 MX1P20591 662 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 SLC52A2Q9HAB3 445 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 DDX58O95786 925 aaKnown RBP15.51■□□□□ 0.07
VPS16-202ENST00000380445 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
VPS16-202ENST00000380445 PHKG2P15735 406 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 HSP90AB4PQ58FF6 505 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 KSR2Q6VAB6 950 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 SALL3Q9BXA9 1300 aa15.51■□□□□ 0.07
VPS16-202ENST00000380445 ADCY9O60503 1353 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 POLA2Q14181 598 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 PPP1R42Q7Z4L9 355 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 USP26Q9BXU7 913 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 AOX1Q06278 1338 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 RABEP1Q15276 862 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 ZNF790Q6PG37 636 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 STAP2Q9UGK3 403 aa15.5■□□□□ 0.07
VPS16-202ENST00000380445 DDX21Q9NR30 783 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS16-202ENST00000380445 ERC2O15083 957 aa15.49■□□□□ 0.07
VPS16-202ENST00000380445 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
VPS16-202ENST00000380445 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
VPS16-202ENST00000380445 CRYBG1Q9Y4K1 1723 aa15.49■□□□□ 0.07
VPS16-202ENST00000380445 SCN11AQ9UI33 1791 aa15.49■□□□□ 0.07
VPS16-202ENST00000380445 SRGAP3O43295 1099 aa15.48■□□□□ 0.07
VPS16-202ENST00000380445 ANXA1P04083 346 aa15.48■□□□□ 0.07
VPS16-202ENST00000380445 NBPF7P0C2Y1 421 aaPredicted RBP15.48■□□□□ 0.07
VPS16-202ENST00000380445 CIZ1Q9ULV3 898 aaPredicted RBP15.48■□□□□ 0.07
VPS16-202ENST00000380445 MAP3K2Q9Y2U5 619 aa15.48■□□□□ 0.07
VPS16-202ENST00000380445 K7ELQ4 463 aaPredicted RBP15.48■□□□□ 0.07
VPS16-202ENST00000380445 SURF6O75683 361 aaKnown RBP15.48■□□□□ 0.07
VPS16-202ENST00000380445 C9orf78Q9NZ63 289 aaPredicted RBP15.48■□□□□ 0.07
VPS16-202ENST00000380445 KIF1BPQ96EK5 621 aa15.47■□□□□ 0.07
VPS16-202ENST00000380445 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
VPS16-202ENST00000380445 CHRNA2Q15822 529 aa15.47■□□□□ 0.07
VPS16-202ENST00000380445 GLIPR1L2Q4G1C9 344 aa15.47■□□□□ 0.07
VPS16-202ENST00000380445 BRINP3Q76B58 766 aa15.47■□□□□ 0.07
VPS16-202ENST00000380445 KDM6AO15550 1401 aaPredicted RBP15.47■□□□□ 0.07
VPS16-202ENST00000380445 MEGF6O75095 1541 aa15.47■□□□□ 0.07
VPS16-202ENST00000380445 MTX1Q13505 466 aa15.46■□□□□ 0.07
VPS16-202ENST00000380445 NFATC2IPQ8NCF5 419 aa15.46■□□□□ 0.07
VPS16-202ENST00000380445 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.06
VPS16-202ENST00000380445 LINS1Q8NG48 757 aa15.46■□□□□ 0.06
VPS16-202ENST00000380445 RHPN1Q8TCX5 695 aa15.46■□□□□ 0.06
VPS16-202ENST00000380445 PROSER3Q2NL68 480 aa15.45■□□□□ 0.06
VPS16-202ENST00000380445 XIRP1Q702N8 1843 aaKnown RBP15.45■□□□□ 0.06
VPS16-202ENST00000380445 TRIM6-TRIM34B2RNG4 842 aa15.44■□□□□ 0.06
VPS16-202ENST00000380445 DDIT3P35638 169 aa15.44■□□□□ 0.06
VPS16-202ENST00000380445 PRAMEF22A3QJZ6 481 aa15.44■□□□□ 0.06
VPS16-202ENST00000380445 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
VPS16-202ENST00000380445 PKD1L3Q7Z443 1732 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 MRC1P22897 1456 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
VPS16-202ENST00000380445 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
VPS16-202ENST00000380445 RILPL2Q969X0 211 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
VPS16-202ENST00000380445 ZMYND15Q9H091 742 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 SLAIN2Q9P270 581 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
VPS16-202ENST00000380445 ST18O60284 1047 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 IL1RAPL2Q9NP60 686 aa15.43■□□□□ 0.06
VPS16-202ENST00000380445 CYP27B1O15528 508 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 MCCP23508 829 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 PDIA6Q15084 440 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 RIC3Q7Z5B4 369 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 FMNL2Q96PY5 1086 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 PRDM11Q9NQV5 511 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 UTYO14607 1347 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 GRM8O00222 908 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 EPB41L2O43491 1005 aaKnown RBP15.42■□□□□ 0.06
VPS16-202ENST00000380445 MCM4P33991 863 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 CABP4P57796 275 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 ERC1Q8IUD2 1116 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 ESYT1Q9BSJ8 1104 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 TUBGCP6Q96RT7 1819 aa15.42■□□□□ 0.06
VPS16-202ENST00000380445 AIMP1Q12904 312 aaKnown RBP15.41■□□□□ 0.06
VPS16-202ENST00000380445 OS9Q13438 667 aaPredicted RBP15.41■□□□□ 0.06
VPS16-202ENST00000380445 TSHZ3Q63HK5 1081 aa15.41■□□□□ 0.06
VPS16-202ENST00000380445 WDR17Q8IZU2 1322 aa15.41■□□□□ 0.06
VPS16-202ENST00000380445 CD2BP2O95400 341 aaKnown RBP15.41■□□□□ 0.06
VPS16-202ENST00000380445 CHMLP26374 656 aa15.41■□□□□ 0.06
VPS16-202ENST00000380445 ZNF496Q96IT1 587 aaPredicted RBP15.41■□□□□ 0.06
VPS16-202ENST00000380445 CWF19L2Q2TBE0 894 aaKnown RBP15.41■□□□□ 0.06
VPS16-202ENST00000380445 VSIG10Q8N0Z9 540 aa15.4■□□□□ 0.06
VPS16-202ENST00000380445 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
VPS16-202ENST00000380445 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
VPS16-202ENST00000380445 NUTM1Q86Y26 1132 aa15.4■□□□□ 0.06
VPS16-202ENST00000380445 TTC41PQ6P2S7 1318 aa15.39■□□□□ 0.05
VPS16-202ENST00000380445 PCDH11XQ9BZA7 1347 aa15.39■□□□□ 0.05
VPS16-202ENST00000380445 PCDH11YQ9BZA8 1340 aa15.39■□□□□ 0.05
VPS16-202ENST00000380445 TOM1L2Q6ZVM7 507 aa15.39■□□□□ 0.05
VPS16-202ENST00000380445 ZNF335Q9H4Z2 1342 aaPredicted RBP15.39■□□□□ 0.05
VPS16-202ENST00000380445 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
VPS16-202ENST00000380445 C5P01031 1676 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms