RNA–Protein interactions for RNA: ENST00000380327.9

TROAP-202, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TROAP, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-202ENST00000380327 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
TROAP-202ENST00000380327 SCN7AQ01118 1682 aa15.5■□□□□ 0.07
TROAP-202ENST00000380327 POLRMTO00411 1230 aaKnown RBP15.49■□□□□ 0.07
TROAP-202ENST00000380327 TEFQ10587 303 aa15.49■□□□□ 0.07
TROAP-202ENST00000380327 ARHGAP27Q6ZUM4 889 aa15.49■□□□□ 0.07
TROAP-202ENST00000380327 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
TROAP-202ENST00000380327 NRXN2Q9P2S2 1712 aa15.48■□□□□ 0.07
TROAP-202ENST00000380327 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
TROAP-202ENST00000380327 PIM2Q9P1W9 311 aa15.48■□□□□ 0.07
TROAP-202ENST00000380327 AFDNP55196 1824 aaKnown RBP15.47■□□□□ 0.07
TROAP-202ENST00000380327 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
TROAP-202ENST00000380327 KCNA3P22001 575 aa15.47■□□□□ 0.07
TROAP-202ENST00000380327 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
TROAP-202ENST00000380327 DALRD3Q5D0E6 543 aaKnown RBP15.47■□□□□ 0.07
TROAP-202ENST00000380327 NARFQ9UHQ1 456 aa15.47■□□□□ 0.07
TROAP-202ENST00000380327 STARD3NLO95772 234 aa15.46■□□□□ 0.07
TROAP-202ENST00000380327 TM4SF1P30408 202 aa15.46■□□□□ 0.07
TROAP-202ENST00000380327 CHRNA5P30532 468 aa15.46■□□□□ 0.07
TROAP-202ENST00000380327 PRKAR2BP31323 418 aa15.46■□□□□ 0.07
TROAP-202ENST00000380327 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
TROAP-202ENST00000380327 NFIXQ14938 502 aa15.45■□□□□ 0.06
TROAP-202ENST00000380327 ZNF790Q6PG37 636 aa15.45■□□□□ 0.06
TROAP-202ENST00000380327 IL17REQ8NFR9 667 aa15.45■□□□□ 0.06
TROAP-202ENST00000380327 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
TROAP-202ENST00000380327 CEMIPQ8WUJ3 1361 aa15.45■□□□□ 0.06
TROAP-202ENST00000380327 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
TROAP-202ENST00000380327 KIF3CO14782 793 aa15.43■□□□□ 0.06
TROAP-202ENST00000380327 FMNL2Q96PY5 1086 aa15.43■□□□□ 0.06
TROAP-202ENST00000380327 BCL2L12Q9HB09 334 aa15.43■□□□□ 0.06
TROAP-202ENST00000380327 NUDCQ9Y266 331 aa15.43■□□□□ 0.06
TROAP-202ENST00000380327 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
TROAP-202ENST00000380327 CARMIL3Q8ND23 1372 aa15.42■□□□□ 0.06
TROAP-202ENST00000380327 A0A087WZG4 1122 aa15.42■□□□□ 0.06
TROAP-202ENST00000380327 HSPA6P17066 643 aa15.42■□□□□ 0.06
TROAP-202ENST00000380327 PPP2R1AP30153 589 aa15.42■□□□□ 0.06
TROAP-202ENST00000380327 C9orf131Q5VYM1 1079 aa15.42■□□□□ 0.06
TROAP-202ENST00000380327 PHACTR3Q96KR7 559 aa15.42■□□□□ 0.06
TROAP-202ENST00000380327 BCORQ6W2J9 1755 aa15.41■□□□□ 0.06
TROAP-202ENST00000380327 BTBD11A6QL63 1104 aa15.41■□□□□ 0.06
TROAP-202ENST00000380327 SERPINB2P05120 415 aa15.41■□□□□ 0.06
TROAP-202ENST00000380327 U2AF1L5P0DN76 240 aaPredicted RBP15.41■□□□□ 0.06
TROAP-202ENST00000380327 EIF5P55010 431 aaKnown RBP15.41■□□□□ 0.06
TROAP-202ENST00000380327 U2AF1Q01081 240 aaKnown RBP eCLIP15.41■□□□□ 0.06
TROAP-202ENST00000380327 BICDL1Q6ZP65 573 aa15.41■□□□□ 0.06
TROAP-202ENST00000380327 TEX13AQ9BXU3 409 aaPredicted RBP15.41■□□□□ 0.06
TROAP-202ENST00000380327 RNF181Q9P0P0 153 aa15.41■□□□□ 0.06
TROAP-202ENST00000380327 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
TROAP-202ENST00000380327 COL11A2P13942 1736 aaPredicted RBP15.4■□□□□ 0.06
TROAP-202ENST00000380327 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
TROAP-202ENST00000380327 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
TROAP-202ENST00000380327 RTF1Q92541 710 aaKnown RBP15.39■□□□□ 0.05
TROAP-202ENST00000380327 NMRK2Q9NPI5 230 aa15.39■□□□□ 0.05
TROAP-202ENST00000380327 ANKRD31Q8N7Z5 1873 aa15.38■□□□□ 0.05
TROAP-202ENST00000380327 IL6STP40189 918 aaPredicted RBP15.38■□□□□ 0.05
TROAP-202ENST00000380327 TBC1D9BQ66K14 1250 aa15.38■□□□□ 0.05
TROAP-202ENST00000380327 C2CD5Q86YS7 1000 aa15.38■□□□□ 0.05
TROAP-202ENST00000380327 TBC1D2BQ9UPU7 963 aa15.38■□□□□ 0.05
TROAP-202ENST00000380327 KDM2BQ8NHM5 1336 aa15.38■□□□□ 0.05
TROAP-202ENST00000380327 KCNQ3O43525 872 aa15.37■□□□□ 0.05
TROAP-202ENST00000380327 TOMM70O94826 608 aa15.37■□□□□ 0.05
TROAP-202ENST00000380327 A1BGP04217 495 aa15.37■□□□□ 0.05
TROAP-202ENST00000380327 RASSF7Q02833 373 aa15.37■□□□□ 0.05
TROAP-202ENST00000380327 MCM10Q7L590 875 aa15.37■□□□□ 0.05
TROAP-202ENST00000380327 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
TROAP-202ENST00000380327 SBF1O95248 1867 aa15.36■□□□□ 0.05
TROAP-202ENST00000380327 H0YIN7 160 aa15.36■□□□□ 0.05
TROAP-202ENST00000380327 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
TROAP-202ENST00000380327 NPHP1O15259 732 aa15.35■□□□□ 0.05
TROAP-202ENST00000380327 C16orf71Q8IYS4 520 aaPredicted RBP15.35■□□□□ 0.05
TROAP-202ENST00000380327 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
TROAP-202ENST00000380327 PRR5LQ6MZQ0 368 aa15.34■□□□□ 0.05
TROAP-202ENST00000380327 DZIP3Q86Y13 1208 aaKnown RBP15.34■□□□□ 0.05
TROAP-202ENST00000380327 CNBD1Q8NA66 436 aa15.34■□□□□ 0.05
TROAP-202ENST00000380327 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
TROAP-202ENST00000380327 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 CAMTA2O94983 1202 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
TROAP-202ENST00000380327 LMNB1P20700 586 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 PDE6BP35913 854 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 APLP1P51693 650 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 CCDC24Q8N4L8 307 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 SETDB2Q96T68 719 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 WDR90Q96KV7 1748 aa15.33■□□□□ 0.04
TROAP-202ENST00000380327 KDM3BQ7LBC6 1761 aa15.32■□□□□ 0.04
TROAP-202ENST00000380327 CACNA1SQ13698 1873 aa15.32■□□□□ 0.04
TROAP-202ENST00000380327 HTATSF1O43719 755 aaKnown RBP15.32■□□□□ 0.04
TROAP-202ENST00000380327 NEFMP07197 916 aa15.32■□□□□ 0.04
TROAP-202ENST00000380327 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
TROAP-202ENST00000380327 ZNF622Q969S3 477 aaKnown RBP eCLIP15.32■□□□□ 0.04
TROAP-202ENST00000380327 BRIP1Q9BX63 1249 aa15.32■□□□□ 0.04
TROAP-202ENST00000380327 PDZRN3Q9UPQ7 1066 aa15.32■□□□□ 0.04
TROAP-202ENST00000380327 USP16Q9Y5T5 823 aa15.32■□□□□ 0.04
TROAP-202ENST00000380327 ARFGEF2Q9Y6D5 1785 aa15.31■□□□□ 0.04
TROAP-202ENST00000380327 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
TROAP-202ENST00000380327 ST5P78524 1137 aa15.31■□□□□ 0.04
TROAP-202ENST00000380327 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
TROAP-202ENST00000380327 NFKBIEO00221 500 aa15.3■□□□□ 0.04
TROAP-202ENST00000380327 PRELPP51888 382 aa15.3■□□□□ 0.04
TROAP-202ENST00000380327 RRAGCQ9HB90 399 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms