RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 TMEM87AQ8NBN3 555 aa14.48□□□□□ -0.09
HERC6-203ENST00000380265 JAKMIP1Q96N16 626 aaKnown RBP14.48□□□□□ -0.09
HERC6-203ENST00000380265 KRT85P78386 507 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 LARP1BQ659C4 914 aaKnown RBP14.47□□□□□ -0.09
HERC6-203ENST00000380265 TRMT1Q9NXH9 659 aaKnown RBP14.47□□□□□ -0.09
HERC6-203ENST00000380265 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 LRRFIP2Q9Y608 721 aaKnown RBP14.47□□□□□ -0.09
HERC6-203ENST00000380265 RPAP1Q9BWH6 1393 aaPredicted RBP14.47□□□□□ -0.09
HERC6-203ENST00000380265 ZFYVE9O95405 1425 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 SETBP1Q9Y6X0 1596 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 MROH2AA6NES4 1674 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 ADGRB1O14514 1584 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 CTIFO43310 598 aaKnown RBP14.47□□□□□ -0.09
HERC6-203ENST00000380265 HSPA4P34932 840 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 CTNNA3Q9UI47 895 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 SNX14Q9Y5W7 946 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 NPATQ14207 1427 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 RUFY3Q7L099 469 aa14.47□□□□□ -0.09
HERC6-203ENST00000380265 GOLGA6L19H0YKK7 550 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 CEP135Q66GS9 1140 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 RASEFQ8IZ41 740 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 FBXW7Q969H0 707 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 DACT1Q9NYF0 836 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 USP32Q8NFA0 1604 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 GNAI3P08754 354 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 FILIP1Q7Z7B0 1213 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 KRT222Q8N1A0 295 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 PDRG1Q9NUG6 133 aa14.46□□□□□ -0.09
HERC6-203ENST00000380265 LARGE1O95461 756 aa14.46□□□□□ -0.1
HERC6-203ENST00000380265 LIG1P18858 919 aa14.46□□□□□ -0.1
HERC6-203ENST00000380265 GABPB1Q06547 395 aaPredicted RBP14.46□□□□□ -0.1
HERC6-203ENST00000380265 CBX8Q9HC52 389 aa14.45□□□□□ -0.1
HERC6-203ENST00000380265 PAXBP1Q9Y5B6 917 aa14.45□□□□□ -0.1
HERC6-203ENST00000380265 ZSCAN25Q6NSZ9 544 aa14.45□□□□□ -0.1
HERC6-203ENST00000380265 PRPF40BQ6NWY9 871 aaKnown RBP14.45□□□□□ -0.1
HERC6-203ENST00000380265 EFCAB6Q5THR3 1501 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 ZNF165P49910 485 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 DNAJC25Q9H1X3 360 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 MTMR6Q9Y217 621 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 FUCA2Q9BTY2 467 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 PPRC1Q5VV67 1664 aaKnown RBP14.44□□□□□ -0.1
HERC6-203ENST00000380265 ARHGEF40Q8TER5 1519 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 GLI2P10070 1586 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
HERC6-203ENST00000380265 PTPN14Q15678 1187 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 CNTROBQ8N137 903 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
HERC6-203ENST00000380265 MRVI1Q9Y6F6 885 aa14.44□□□□□ -0.1
HERC6-203ENST00000380265 ERCC6L2Q5T890 1561 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 YTHDC2Q9H6S0 1430 aaKnown RBP14.43□□□□□ -0.1
HERC6-203ENST00000380265 CHL1O00533 1208 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 MLECQ14165 292 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 SPATA32Q96LK8 384 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 NAP1L2Q9ULW6 460 aaPredicted RBP14.43□□□□□ -0.1
HERC6-203ENST00000380265 TCHHQ07283 1943 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 BECN2A8MW95 431 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 TTC6Q86TZ1 520 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 ZNF215Q9UL58 517 aaPredicted RBP14.43□□□□□ -0.1
HERC6-203ENST00000380265 CYP46A1Q9Y6A2 500 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 ADGRB3O60242 1522 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 NUTM2FA1L443 756 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 CEBPZQ03701 1054 aaKnown RBP14.43□□□□□ -0.1
HERC6-203ENST00000380265 TCEANC2Q96MN5 208 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 TMEM51Q9NW97 253 aa14.43□□□□□ -0.1
HERC6-203ENST00000380265 ZNF75DP51815 510 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 STK3Q13188 491 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 KIF18AQ8NI77 898 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 CACTINQ8WUQ7 758 aaKnown RBP14.42□□□□□ -0.1
HERC6-203ENST00000380265 ATP8B2P98198 1209 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 RAD50Q92878 1312 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 ELF2Q15723 593 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 TIGD1Q96MW7 591 aa14.42□□□□□ -0.1
HERC6-203ENST00000380265 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 KNDC1Q76NI1 1749 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 ZNF397Q8NF99 534 aaPredicted RBP14.41□□□□□ -0.1
HERC6-203ENST00000380265 SGSM2O43147 1006 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 FOXO3O43524 673 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 ZKSCAN1P17029 563 aaPredicted RBP14.41□□□□□ -0.1
HERC6-203ENST00000380265 FOSBP53539 338 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 FLIIQ13045 1269 aa14.41□□□□□ -0.1
HERC6-203ENST00000380265 TERF2Q15554 542 aa14.4□□□□□ -0.1
HERC6-203ENST00000380265 ST7Q9NRC1 585 aa14.4□□□□□ -0.1
HERC6-203ENST00000380265 ARID5BQ14865 1188 aa14.4□□□□□ -0.1
HERC6-203ENST00000380265 GORABQ5T7V8 394 aa14.4□□□□□ -0.1
HERC6-203ENST00000380265 CDC37L1Q7L3B6 337 aa14.4□□□□□ -0.1
HERC6-203ENST00000380265 SKILP12757 684 aa14.39□□□□□ -0.11
HERC6-203ENST00000380265 SSH2Q76I76 1423 aa14.39□□□□□ -0.11
HERC6-203ENST00000380265 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
HERC6-203ENST00000380265 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
HERC6-203ENST00000380265 SRGAP3O43295 1099 aa14.39□□□□□ -0.11
HERC6-203ENST00000380265 ADCK5Q3MIX3 580 aa14.39□□□□□ -0.11
HERC6-203ENST00000380265 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
HERC6-203ENST00000380265 SYTL4Q96C24 671 aaPredicted RBP14.39□□□□□ -0.11
HERC6-203ENST00000380265 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
HERC6-203ENST00000380265 TTC14Q96N46 770 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 VWDEQ8N2E2 1590 aa14.38□□□□□ -0.11
HERC6-203ENST00000380265 RAB11FIP3O75154 756 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms