RNA–Protein interactions for RNA: ENST00000380243.8

CCDC85C-201, Transcript of coiled-coil domain containing 85C, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC85C, Length 16,393 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-201ENST00000380243 SEPT11Q9NVA2 429 aaKnown RBP12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 SCAPERQ9BY12 1400 aa12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
CCDC85C-201ENST00000380243 RRBP1Q9P2E9 1410 aaKnown RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 RAD21O60216 631 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 PHAXQ9H814 394 aaKnown RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 CPLX3Q8WVH0 158 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 U2AF2P26368 475 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 PLEKHH2Q8IVE3 1493 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 BIN1O00499 593 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 TTC5Q8N0Z6 440 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 FKBP15Q5T1M5 1219 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 A6NNZ2 444 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 TUBB8Q3ZCM7 444 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 RIOK3O14730 519 aaKnown RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 C6orf163Q5TEZ5 329 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 PHACTR2O75167 634 aa12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 RPAP2Q8IXW5 612 aaPredicted RBP12.09□□□□□ -0.47
CCDC85C-201ENST00000380243 FBF1Q8TES7 1133 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC6Q16204 474 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 CNPY2Q9Y2B0 182 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 ANO6Q4KMQ2 910 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 NUCB1Q02818 461 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 CEP83Q9Y592 693 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC69A6NI79 296 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 HDAC1Q13547 482 aaPredicted RBP12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 MPHOSPH10O00566 681 aaKnown RBP12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 NEBLO76041 1014 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 MATR3P43243 847 aaKnown RBP eCLIP12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 UBASH3AP57075 661 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 ELF2Q15723 593 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC178Q5BJE1 867 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 KIF4AO95239 1232 aa12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 MINK1Q8N4C8 1332 aaPredicted RBP12.07□□□□□ -0.48
CCDC85C-201ENST00000380243 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 C17orf53Q8N3J3 647 aaPredicted RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 GOLIM4O00461 696 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.06□□□□□ -0.486e-7■■□□□ 12.6
CCDC85C-201ENST00000380243 ARHGAP25P42331 645 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 STMN4Q9H169 189 aaPredicted RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 KIF3CO14782 793 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 ZHX3Q9H4I2 956 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 GSTTP1A0A1W2PQM5 241 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 LACTBP83111 547 aaPredicted RBP12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 TUBB2AQ13885 445 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 ZSCAN26Q16670 478 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 TUBB2BQ9BVA1 445 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 JADE2Q9NQC1 790 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 MIPOL1Q8TD10 442 aa12.06□□□□□ -0.48
CCDC85C-201ENST00000380243 NACAP1Q9BZK3 213 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC155Q8N6L0 562 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 ZNF445P59923 1031 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 DUSP27Q5VZP5 1158 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 TMX3Q96JJ7 454 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 RBBP5Q15291 538 aaKnown RBP12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 LMNTD2Q8IXW0 634 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 RAB11FIP3O75154 756 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 DNA2P51530 1060 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 HOOK3Q86VS8 718 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 ZEB2O60315 1214 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
CCDC85C-201ENST00000380243 C8orf76Q96K31 380 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC129Q6ZRS4 1044 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 CFAP57Q96MR6 1250 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 FYB1O15117 783 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 GJB2P29033 226 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC102BQ68D86 513 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 CTDP1Q9Y5B0 961 aaPredicted RBP12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 TTC14Q96N46 770 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 BUB1BO60566 1050 aaPredicted RBP12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 FAM114A1Q8IWE2 563 aa12.04□□□□□ -0.48
CCDC85C-201ENST00000380243 SIL1Q9H173 461 aa12.03□□□□□ -0.48
CCDC85C-201ENST00000380243 HMGB1P09429 215 aaKnown RBP12.03□□□□□ -0.48
CCDC85C-201ENST00000380243 GAS2L2Q8NHY3 880 aa12.03□□□□□ -0.48
CCDC85C-201ENST00000380243 CCDC57Q2TAC2 916 aa12.03□□□□□ -0.48
CCDC85C-201ENST00000380243 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
CCDC85C-201ENST00000380243 SAMD15Q9P1V8 674 aa12.03□□□□□ -0.48
CCDC85C-201ENST00000380243 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms