RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 DDR1Q08345 913 aa31.7■■■□□ 2.67
CDKN2A-203ENST00000380151 USPL1Q5W0Q7 1092 aa31.7■■■□□ 2.67
CDKN2A-203ENST00000380151 BTBD11A6QL63 1104 aa31.69■■■□□ 2.66
CDKN2A-203ENST00000380151 KCNQ3O43525 872 aa31.69■■■□□ 2.66
CDKN2A-203ENST00000380151 STARD3NLO95772 234 aa31.69■■■□□ 2.66
CDKN2A-203ENST00000380151 CANXP27824 592 aaKnown RBP31.69■■■□□ 2.66
CDKN2A-203ENST00000380151 DDX10Q13206 875 aaKnown RBP31.69■■■□□ 2.66
CDKN2A-203ENST00000380151 FMNL2Q96PY5 1086 aa31.68■■■□□ 2.66
CDKN2A-203ENST00000380151 N4BP2Q86UW6 1770 aaPredicted RBP31.67■■■□□ 2.66
CDKN2A-203ENST00000380151 DCTN1Q14203 1278 aa31.67■■■□□ 2.66
CDKN2A-203ENST00000380151 TGFB2P61812 414 aa31.65■■■□□ 2.66
CDKN2A-203ENST00000380151 NARFQ9UHQ1 456 aa31.65■■■□□ 2.66
CDKN2A-203ENST00000380151 A0A0G2JLW4 131 aa31.64■■■□□ 2.66
CDKN2A-203ENST00000380151 NEFMP07197 916 aa31.63■■■□□ 2.65
CDKN2A-203ENST00000380151 RALBP1Q15311 655 aa31.63■■■□□ 2.65
CDKN2A-203ENST00000380151 TEX13AQ9BXU3 409 aaPredicted RBP31.63■■■□□ 2.65
CDKN2A-203ENST00000380151 POLRMTO00411 1230 aaKnown RBP31.62■■■□□ 2.65
CDKN2A-203ENST00000380151 HTATSF1O43719 755 aaKnown RBP31.61■■■□□ 2.65
CDKN2A-203ENST00000380151 DPEP1P16444 411 aa31.61■■■□□ 2.65
CDKN2A-203ENST00000380151 TM4SF1P30408 202 aa31.61■■■□□ 2.65
CDKN2A-203ENST00000380151 EIF5P55010 431 aaKnown RBP31.61■■■□□ 2.65
CDKN2A-203ENST00000380151 PLEKHF1Q96S99 279 aa31.61■■■□□ 2.65
CDKN2A-203ENST00000380151 BCL2L12Q9HB09 334 aa31.61■■■□□ 2.65
CDKN2A-203ENST00000380151 ZNF330Q9Y3S2 320 aaPredicted RBP31.6■■■□□ 2.65
CDKN2A-203ENST00000380151 NFIXQ14938 502 aa31.59■■■□□ 2.65
CDKN2A-203ENST00000380151 DLG5Q8TDM6 1919 aa31.57■■■□□ 2.64
CDKN2A-203ENST00000380151 A1BGP04217 495 aa31.57■■■□□ 2.64
CDKN2A-203ENST00000380151 BCS1LQ9Y276 419 aa31.57■■■□□ 2.64
CDKN2A-203ENST00000380151 A0A087WZG4 1122 aa31.56■■■□□ 2.64
CDKN2A-203ENST00000380151 PRAMEF22A3QJZ6 481 aa31.56■■■□□ 2.64
CDKN2A-203ENST00000380151 SCN7AQ01118 1682 aa31.56■■■□□ 2.64
CDKN2A-203ENST00000380151 MAPK8IP3Q9UPT6 1336 aa31.55■■■□□ 2.64
CDKN2A-203ENST00000380151 NFE2L2Q16236 605 aa31.55■■■□□ 2.64
CDKN2A-203ENST00000380151 BRCA1P38398 1863 aaKnown RBP31.55■■■□□ 2.64
CDKN2A-203ENST00000380151 IL6STP40189 918 aaPredicted RBP31.54■■■□□ 2.64
CDKN2A-203ENST00000380151 USP16Q9Y5T5 823 aa31.54■■■□□ 2.64
CDKN2A-203ENST00000380151 MYBBP1AQ9BQG0 1328 aaKnown RBP31.53■■■□□ 2.64
CDKN2A-203ENST00000380151 ATP10DQ9P241 1426 aa31.53■■■□□ 2.64
CDKN2A-203ENST00000380151 TAF7Q15545 349 aaPredicted RBP31.53■■■□□ 2.64
CDKN2A-203ENST00000380151 AFDNP55196 1824 aaKnown RBP31.52■■■□□ 2.64
CDKN2A-203ENST00000380151 SNRPA1P09661 255 aaKnown RBP31.52■■■□□ 2.64
CDKN2A-203ENST00000380151 KCNA3P22001 575 aa31.52■■■□□ 2.64
CDKN2A-203ENST00000380151 MIS18AQ9NYP9 233 aa31.52■■■□□ 2.64
CDKN2A-203ENST00000380151 TBC1D2BQ9UPU7 963 aa31.52■■■□□ 2.64
CDKN2A-203ENST00000380151 PIP4K2AP48426 406 aaPredicted RBP31.51■■■□□ 2.63
CDKN2A-203ENST00000380151 BICDL1Q6ZP65 573 aa31.51■■■□□ 2.63
CDKN2A-203ENST00000380151 THUMPD2Q9BTF0 503 aaKnown RBP31.51■■■□□ 2.63
CDKN2A-203ENST00000380151 PNNQ9H307 717 aaKnown RBP31.51■■■□□ 2.63
CDKN2A-203ENST00000380151 NRXN2Q9P2S2 1712 aa31.51■■■□□ 2.63
CDKN2A-203ENST00000380151 ADCY9O60503 1353 aa31.51■■■□□ 2.63
CDKN2A-203ENST00000380151 SERPINB2P05120 415 aa31.5■■■□□ 2.63
CDKN2A-203ENST00000380151 CHRNA5P30532 468 aa31.5■■■□□ 2.63
CDKN2A-203ENST00000380151 NPM2Q86SE8 214 aaKnown RBP31.49■■■□□ 2.63
CDKN2A-203ENST00000380151 TBC1D9BQ66K14 1250 aa31.48■■■□□ 2.63
CDKN2A-203ENST00000380151 PIM2Q9P1W9 311 aa31.47■■■□□ 2.63
CDKN2A-203ENST00000380151 CARMIL3Q8ND23 1372 aa31.46■■■□□ 2.63
CDKN2A-203ENST00000380151 KDM3BQ7LBC6 1761 aa31.46■■■□□ 2.63
CDKN2A-203ENST00000380151 CAMTA2O94983 1202 aa31.45■■■□□ 2.63
CDKN2A-203ENST00000380151 BCORQ6W2J9 1755 aa31.45■■■□□ 2.62
CDKN2A-203ENST00000380151 GIGYF1O75420 1035 aaPredicted RBP31.44■■■□□ 2.62
CDKN2A-203ENST00000380151 DALRD3Q5D0E6 543 aaKnown RBP31.44■■■□□ 2.62
CDKN2A-203ENST00000380151 ARHGAP27Q6ZUM4 889 aa31.44■■■□□ 2.62
CDKN2A-203ENST00000380151 DZIP3Q86Y13 1208 aaKnown RBP31.44■■■□□ 2.62
CDKN2A-203ENST00000380151 PNISRQ8TF01 805 aaKnown RBP31.44■■■□□ 2.62
CDKN2A-203ENST00000380151 ARFGEF1Q9Y6D6 1849 aa31.43■■■□□ 2.62
CDKN2A-203ENST00000380151 LAMB4A4D0S4 1761 aa31.43■■■□□ 2.62
CDKN2A-203ENST00000380151 ZNF526Q8TF50 670 aaPredicted RBP31.41■■■□□ 2.62
CDKN2A-203ENST00000380151 NBPF26B4DH59 902 aa31.4■■■□□ 2.62
CDKN2A-203ENST00000380151 NBPF10Q6P3W6 841 aaKnown RBP31.4■■■□□ 2.62
CDKN2A-203ENST00000380151 NBPF15Q8N660 670 aa31.4■■■□□ 2.62
CDKN2A-203ENST00000380151 RIPK4P57078 832 aa31.38■■■□□ 2.61
CDKN2A-203ENST00000380151 C1QTNF8P60827 252 aa31.38■■■□□ 2.61
CDKN2A-203ENST00000380151 CCDC146Q8IYE0 955 aa31.38■■■□□ 2.61
CDKN2A-203ENST00000380151 EIF4A1P60842 406 aaKnown RBP31.37■■■□□ 2.61
CDKN2A-203ENST00000380151 PRKRIP1Q9H875 184 aaPredicted RBP31.37■■■□□ 2.61
CDKN2A-203ENST00000380151 GPBP1L1Q9HC44 474 aaPredicted RBP31.37■■■□□ 2.61
CDKN2A-203ENST00000380151 DLEC1Q9Y238 1755 aa31.37■■■□□ 2.61
CDKN2A-203ENST00000380151 TMPOP42166 694 aaKnown RBP31.36■■■□□ 2.61
CDKN2A-203ENST00000380151 WDR43Q15061 677 aaKnown RBP eCLIP31.36■■■□□ 2.61
CDKN2A-203ENST00000380151 PRR5LQ6MZQ0 368 aa31.36■■■□□ 2.61
CDKN2A-203ENST00000380151 C2CD5Q86YS7 1000 aa31.36■■■□□ 2.61
CDKN2A-203ENST00000380151 CCDC24Q8N4L8 307 aa31.36■■■□□ 2.61
CDKN2A-203ENST00000380151 SETDB2Q96T68 719 aa31.36■■■□□ 2.61
CDKN2A-203ENST00000380151 RRP7AQ9Y3A4 280 aaKnown RBP31.35■■■□□ 2.61
CDKN2A-203ENST00000380151 ANKRD31Q8N7Z5 1873 aa31.34■■■□□ 2.61
CDKN2A-203ENST00000380151 LMOD3Q0VAK6 560 aa31.32■■■□□ 2.6
CDKN2A-203ENST00000380151 CNBD1Q8NA66 436 aa31.32■■■□□ 2.6
CDKN2A-203ENST00000380151 TSPYL4Q9UJ04 414 aa31.32■■■□□ 2.6
CDKN2A-203ENST00000380151 ZNF652Q9Y2D9 606 aa31.32■■■□□ 2.6
CDKN2A-203ENST00000380151 H0YIN7 160 aa31.31■■■□□ 2.6
CDKN2A-203ENST00000380151 NPHP1O15259 732 aa31.31■■■□□ 2.6
CDKN2A-203ENST00000380151 COL11A2P13942 1736 aaPredicted RBP31.3■■■□□ 2.6
CDKN2A-203ENST00000380151 NEUROD2Q15784 382 aa31.3■■■□□ 2.6
CDKN2A-203ENST00000380151 CLEC4GQ6UXB4 293 aa31.3■■■□□ 2.6
CDKN2A-203ENST00000380151 BRIP1Q9BX63 1249 aa31.3■■■□□ 2.6
CDKN2A-203ENST00000380151 C9orf131Q5VYM1 1079 aa31.29■■■□□ 2.6
CDKN2A-203ENST00000380151 TTLL6Q8N841 843 aa31.29■■■□□ 2.6
CDKN2A-203ENST00000380151 ZEB1P37275 1124 aaPredicted RBP31.28■■■□□ 2.6
CDKN2A-203ENST00000380151 NGEFQ8N5V2 710 aa31.28■■■□□ 2.6
CDKN2A-203ENST00000380151 RUNDC1Q96C34 613 aa31.28■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms