RNA–Protein interactions for RNA: ENST00000380150.2

CDKN2A-202, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-202ENST00000380150 COL15A1P39059 1388 aa27.27■■□□□ 1.96
CDKN2A-202ENST00000380150 U2SURPO15042 1029 aaKnown RBP27.27■■□□□ 1.96
CDKN2A-202ENST00000380150 ARFGEF1Q9Y6D6 1849 aa27.27■■□□□ 1.96
CDKN2A-202ENST00000380150 NFIXQ14938 502 aa27.26■■□□□ 1.95
CDKN2A-202ENST00000380150 DALRD3Q5D0E6 543 aaKnown RBP27.26■■□□□ 1.95
CDKN2A-202ENST00000380150 C9orf131Q5VYM1 1079 aa27.26■■□□□ 1.95
CDKN2A-202ENST00000380150 NMRK2Q9NPI5 230 aa27.26■■□□□ 1.95
CDKN2A-202ENST00000380150 UBR2Q8IWV8 1755 aa27.26■■□□□ 1.95
CDKN2A-202ENST00000380150 IL17REQ8NFR9 667 aa27.25■■□□□ 1.95
CDKN2A-202ENST00000380150 NARFQ9UHQ1 456 aa27.25■■□□□ 1.95
CDKN2A-202ENST00000380150 CANXP27824 592 aaKnown RBP27.24■■□□□ 1.95
CDKN2A-202ENST00000380150 NPC1L1Q9UHC9 1359 aa27.23■■□□□ 1.95
CDKN2A-202ENST00000380150 AFDNP55196 1824 aaKnown RBP27.23■■□□□ 1.95
CDKN2A-202ENST00000380150 VSIG10Q8N0Z9 540 aa27.22■■□□□ 1.95
CDKN2A-202ENST00000380150 ZNF496Q96IT1 587 aaPredicted RBP27.21■■□□□ 1.95
CDKN2A-202ENST00000380150 NRXN2Q9P2S2 1712 aa27.19■■□□□ 1.94
CDKN2A-202ENST00000380150 PHACTR3Q96KR7 559 aa27.19■■□□□ 1.94
CDKN2A-202ENST00000380150 CARMIL3Q8ND23 1372 aa27.19■■□□□ 1.94
CDKN2A-202ENST00000380150 GNAT3A8MTJ3 354 aa27.18■■□□□ 1.94
CDKN2A-202ENST00000380150 SERPINB2P05120 415 aa27.18■■□□□ 1.94
CDKN2A-202ENST00000380150 TTC5Q8N0Z6 440 aa27.18■■□□□ 1.94
CDKN2A-202ENST00000380150 SIPA1L3O60292 1781 aaPredicted RBP27.17■■□□□ 1.94
CDKN2A-202ENST00000380150 BICDL1Q6ZP65 573 aa27.17■■□□□ 1.94
CDKN2A-202ENST00000380150 RNF181Q9P0P0 153 aa27.17■■□□□ 1.94
CDKN2A-202ENST00000380150 TOMM70O94826 608 aa27.16■■□□□ 1.94
CDKN2A-202ENST00000380150 EIF5P55010 431 aaKnown RBP27.16■■□□□ 1.94
CDKN2A-202ENST00000380150 RASSF7Q02833 373 aa27.16■■□□□ 1.94
CDKN2A-202ENST00000380150 TEFQ10587 303 aa27.16■■□□□ 1.94
CDKN2A-202ENST00000380150 ZNF790Q6PG37 636 aa27.16■■□□□ 1.94
CDKN2A-202ENST00000380150 GAS2L2Q8NHY3 880 aa27.16■■□□□ 1.94
CDKN2A-202ENST00000380150 HEG1Q9ULI3 1381 aa27.15■■□□□ 1.94
CDKN2A-202ENST00000380150 KCNQ3O43525 872 aa27.15■■□□□ 1.94
CDKN2A-202ENST00000380150 PRELPP51888 382 aa27.14■■□□□ 1.94
CDKN2A-202ENST00000380150 STARD3NLO95772 234 aa27.13■■□□□ 1.93
CDKN2A-202ENST00000380150 PRKAR2BP31323 418 aa27.13■■□□□ 1.93
CDKN2A-202ENST00000380150 RSPH6AQ9H0K4 717 aa27.13■■□□□ 1.93
CDKN2A-202ENST00000380150 ZNF330Q9Y3S2 320 aaPredicted RBP27.13■■□□□ 1.93
CDKN2A-202ENST00000380150 SBF1O95248 1867 aa27.13■■□□□ 1.93
CDKN2A-202ENST00000380150 TBC1D9BQ66K14 1250 aa27.12■■□□□ 1.93
CDKN2A-202ENST00000380150 TBC1D2BQ9UPU7 963 aa27.12■■□□□ 1.93
CDKN2A-202ENST00000380150 CEMIPQ8WUJ3 1361 aa27.11■■□□□ 1.93
CDKN2A-202ENST00000380150 C2CD5Q86YS7 1000 aa27.11■■□□□ 1.93
CDKN2A-202ENST00000380150 CCDC24Q8N4L8 307 aa27.11■■□□□ 1.93
CDKN2A-202ENST00000380150 DLEC1Q9Y238 1755 aa27.11■■□□□ 1.93
CDKN2A-202ENST00000380150 A1BGP04217 495 aa27.1■■□□□ 1.93
CDKN2A-202ENST00000380150 SCN7AQ01118 1682 aa27.08■■□□□ 1.93
CDKN2A-202ENST00000380150 RRAGCQ9HB90 399 aa27.08■■□□□ 1.93
CDKN2A-202ENST00000380150 ANKRD31Q8N7Z5 1873 aa27.07■■□□□ 1.92
CDKN2A-202ENST00000380150 PRAMEF22A3QJZ6 481 aa27.07■■□□□ 1.92
CDKN2A-202ENST00000380150 PIP4K2AP48426 406 aaPredicted RBP27.07■■□□□ 1.92
CDKN2A-202ENST00000380150 FMNL2Q96PY5 1086 aa27.07■■□□□ 1.92
CDKN2A-202ENST00000380150 A0A087WZG4 1122 aa27.06■■□□□ 1.92
CDKN2A-202ENST00000380150 BTBD11A6QL63 1104 aa27.06■■□□□ 1.92
CDKN2A-202ENST00000380150 APLP1P51693 650 aa27.06■■□□□ 1.92
CDKN2A-202ENST00000380150 TTLL6Q8N841 843 aa27.06■■□□□ 1.92
CDKN2A-202ENST00000380150 PPP2R1AP30153 589 aa27.05■■□□□ 1.92
CDKN2A-202ENST00000380150 IL6STP40189 918 aaPredicted RBP27.05■■□□□ 1.92
CDKN2A-202ENST00000380150 HTRA3P83110 453 aa27.05■■□□□ 1.92
CDKN2A-202ENST00000380150 DNAJC5GQ8N7S2 189 aa27.05■■□□□ 1.92
CDKN2A-202ENST00000380150 CFAP53Q96M91 514 aa27.05■■□□□ 1.92
CDKN2A-202ENST00000380150 TEX13AQ9BXU3 409 aaPredicted RBP27.05■■□□□ 1.92
CDKN2A-202ENST00000380150 H0YIN7 160 aa27.04■■□□□ 1.92
CDKN2A-202ENST00000380150 MCM10Q7L590 875 aa27.04■■□□□ 1.92
CDKN2A-202ENST00000380150 RBM46Q8TBY0 533 aaKnown RBP27.04■■□□□ 1.92
CDKN2A-202ENST00000380150 USP16Q9Y5T5 823 aa27.04■■□□□ 1.92
CDKN2A-202ENST00000380150 KDM2BQ8NHM5 1336 aa27.04■■□□□ 1.92
CDKN2A-202ENST00000380150 NFKBIEO00221 500 aa27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 CAMTA2O94983 1202 aa27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 U2AF1L5P0DN76 240 aaPredicted RBP27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 COL11A2P13942 1736 aaPredicted RBP27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 U2AF1Q01081 240 aaKnown RBP eCLIP27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 IFFO2Q5TF58 517 aa27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 PRR5LQ6MZQ0 368 aa27.03■■□□□ 1.92
CDKN2A-202ENST00000380150 DCTN1Q14203 1278 aa27.02■■□□□ 1.92
CDKN2A-202ENST00000380150 C16orf71Q8IYS4 520 aaPredicted RBP27.02■■□□□ 1.92
CDKN2A-202ENST00000380150 ZNF219Q9P2Y4 722 aaPredicted RBP27.02■■□□□ 1.92
CDKN2A-202ENST00000380150 LMNB1P20700 586 aa27.01■■□□□ 1.91
CDKN2A-202ENST00000380150 ZNF622Q969S3 477 aaKnown RBP eCLIP27■■□□□ 1.91
CDKN2A-202ENST00000380150 TNRC6CQ9HCJ0 1690 aaKnown RBP27■■□□□ 1.91
CDKN2A-202ENST00000380150 NUDCQ9Y266 331 aa26.99■■□□□ 1.91
CDKN2A-202ENST00000380150 WDR90Q96KV7 1748 aa26.99■■□□□ 1.91
CDKN2A-202ENST00000380150 DZIP3Q86Y13 1208 aaKnown RBP26.98■■□□□ 1.91
CDKN2A-202ENST00000380150 BRIP1Q9BX63 1249 aa26.98■■□□□ 1.91
CDKN2A-202ENST00000380150 BCORQ6W2J9 1755 aa26.97■■□□□ 1.91
CDKN2A-202ENST00000380150 TIAM2Q8IVF5 1701 aa26.97■■□□□ 1.91
CDKN2A-202ENST00000380150 C21orf2O43822 256 aa26.97■■□□□ 1.91
CDKN2A-202ENST00000380150 CCDC88AQ3V6T2 1871 aa26.96■■□□□ 1.91
CDKN2A-202ENST00000380150 PDE6BP35913 854 aa26.95■■□□□ 1.9
CDKN2A-202ENST00000380150 FSTL1Q12841 308 aa26.95■■□□□ 1.9
CDKN2A-202ENST00000380150 SETDB2Q96T68 719 aa26.95■■□□□ 1.9
CDKN2A-202ENST00000380150 GLTPD2A6NH11 291 aa26.94■■□□□ 1.9
CDKN2A-202ENST00000380150 CNBD1Q8NA66 436 aa26.94■■□□□ 1.9
CDKN2A-202ENST00000380150 RTF1Q92541 710 aaKnown RBP26.94■■□□□ 1.9
CDKN2A-202ENST00000380150 ZC3H4Q9UPT8 1303 aaKnown RBP26.93■■□□□ 1.9
CDKN2A-202ENST00000380150 NBPF26B4DH59 902 aa26.93■■□□□ 1.9
CDKN2A-202ENST00000380150 NBPF10Q6P3W6 841 aaKnown RBP26.93■■□□□ 1.9
CDKN2A-202ENST00000380150 NBPF15Q8N660 670 aa26.93■■□□□ 1.9
CDKN2A-202ENST00000380150 MIS18AQ9NYP9 233 aa26.93■■□□□ 1.9
CDKN2A-202ENST00000380150 SNRPA1P09661 255 aaKnown RBP26.92■■□□□ 1.9
CDKN2A-202ENST00000380150 NPM2Q86SE8 214 aaKnown RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms