RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 CHL1O00533 1208 aa16.99■□□□□ 0.31
SNCAIP-203ENST00000379538 CRYBG1Q9Y4K1 1723 aa16.99■□□□□ 0.31
SNCAIP-203ENST00000379538 GSPT1P15170 499 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-203ENST00000379538 NOL7Q9UMY1 257 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-203ENST00000379538 CRB1P82279 1406 aa16.99■□□□□ 0.31
SNCAIP-203ENST00000379538 BTG4Q9NY30 223 aa16.98■□□□□ 0.31
SNCAIP-203ENST00000379538 CAMTA1Q9Y6Y1 1673 aa16.98■□□□□ 0.31
SNCAIP-203ENST00000379538 SYCE3A1L190 88 aa16.98■□□□□ 0.31
SNCAIP-203ENST00000379538 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-203ENST00000379538 APBB1O00213 710 aa16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 RAPGEF4Q8WZA2 1011 aa16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 EVA1CP58658 441 aa16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 ZNF445P59923 1031 aa16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 OTUD7AQ8TE49 926 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
SNCAIP-203ENST00000379538 EP400Q96L91 3159 aa16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 ABCC6O95255 1503 aa16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 FOXD4L6Q3SYB3 417 aaPredicted RBP16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 FOXD4L3Q6VB84 417 aaPredicted RBP16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 TPRNQ4KMQ1 711 aa16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 KIF16BQ96L93 1317 aa16.96■□□□□ 0.31
SNCAIP-203ENST00000379538 MEGF6O75095 1541 aa16.96■□□□□ 0.3
SNCAIP-203ENST00000379538 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
SNCAIP-203ENST00000379538 COL22A1Q8NFW1 1626 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-203ENST00000379538 PLEKHO1Q53GL0 409 aaPredicted RBP16.95■□□□□ 0.3
SNCAIP-203ENST00000379538 ZDHHC9Q9Y397 364 aa16.95■□□□□ 0.3
SNCAIP-203ENST00000379538 IPO8O15397 1037 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-203ENST00000379538 PDLIM2Q96JY6 352 aa16.94■□□□□ 0.3
SNCAIP-203ENST00000379538 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
SNCAIP-203ENST00000379538 SLC39A6Q13433 755 aa16.94■□□□□ 0.3
SNCAIP-203ENST00000379538 CT47B1P0C2W7 299 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 ZKSCAN5Q9Y2L8 839 aa16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 COL18A1P39060 1754 aa16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 CYP27B1O15528 508 aa16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 TOM1O60784 492 aa16.93■□□□□ 0.3
SNCAIP-203ENST00000379538 PTMSP20962 102 aa16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 CDC45O75419 566 aa16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 CPDO75976 1380 aa16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 ZNF830Q96NB3 372 aaPredicted RBP16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 PODXL2Q9NZ53 605 aa16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
SNCAIP-203ENST00000379538 ANXA1P04083 346 aa16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 CYP2E1P05181 493 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 TATP17735 454 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 EIF2S2P20042 333 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 G2E3Q7L622 706 aa16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 TEFQ10587 303 aa16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 C17orf53Q8N3J3 647 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-203ENST00000379538 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
SNCAIP-203ENST00000379538 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
SNCAIP-203ENST00000379538 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
SNCAIP-203ENST00000379538 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
SNCAIP-203ENST00000379538 SMARCA5O60264 1052 aaPredicted RBP16.89■□□□□ 0.3
SNCAIP-203ENST00000379538 SLC4A2P04920 1241 aa16.89■□□□□ 0.3
SNCAIP-203ENST00000379538 GCC1Q96CN9 775 aa16.89■□□□□ 0.3
SNCAIP-203ENST00000379538 USP26Q9BXU7 913 aa16.89■□□□□ 0.3
SNCAIP-203ENST00000379538 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
SNCAIP-203ENST00000379538 COL5A2P05997 1499 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-203ENST00000379538 F6X3S4 739 aa16.88■□□□□ 0.29
SNCAIP-203ENST00000379538 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
SNCAIP-203ENST00000379538 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
SNCAIP-203ENST00000379538 PHKG2P15735 406 aa16.88■□□□□ 0.29
SNCAIP-203ENST00000379538 NUCB2P80303 420 aa16.88■□□□□ 0.29
SNCAIP-203ENST00000379538 RABEP1Q15276 862 aa16.87■□□□□ 0.29
SNCAIP-203ENST00000379538 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
SNCAIP-203ENST00000379538 KAT6BQ8WYB5 2073 aa16.87■□□□□ 0.29
SNCAIP-203ENST00000379538 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
SNCAIP-203ENST00000379538 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
SNCAIP-203ENST00000379538 TERF1P54274 439 aa16.87■□□□□ 0.29
SNCAIP-203ENST00000379538 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
SNCAIP-203ENST00000379538 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
SNCAIP-203ENST00000379538 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
SNCAIP-203ENST00000379538 HS1BP3Q53T59 392 aa16.85■□□□□ 0.29
SNCAIP-203ENST00000379538 DNTTIP2Q5QJE6 756 aaKnown RBP16.85■□□□□ 0.29
SNCAIP-203ENST00000379538 HTATSF1O43719 755 aaKnown RBP16.85■□□□□ 0.29
SNCAIP-203ENST00000379538 NCAPD2Q15021 1401 aa16.85■□□□□ 0.29
SNCAIP-203ENST00000379538 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 FAM208AQ9UK61 1670 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 CERKQ8TCT0 537 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 SDSP20132 328 aa16.84■□□□□ 0.29
SNCAIP-203ENST00000379538 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms