RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
PRNP-201ENST00000379440 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
PRNP-201ENST00000379440 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
PRNP-201ENST00000379440 N4BP2Q86UW6 1770 aaPredicted RBP18.34■□□□□ 0.53
PRNP-201ENST00000379440 PDE1AP54750 535 aa18.34■□□□□ 0.53
PRNP-201ENST00000379440 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
PRNP-201ENST00000379440 KDM6AO15550 1401 aaPredicted RBP18.34■□□□□ 0.53
PRNP-201ENST00000379440 ZNF335Q9H4Z2 1342 aaPredicted RBP18.34■□□□□ 0.53
PRNP-201ENST00000379440 SPG7Q9UQ90 795 aa18.34■□□□□ 0.53
PRNP-201ENST00000379440 SIPA1L3O60292 1781 aaPredicted RBP18.33■□□□□ 0.52
PRNP-201ENST00000379440 PPP1R42Q7Z4L9 355 aa18.33■□□□□ 0.52
PRNP-201ENST00000379440 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
PRNP-201ENST00000379440 IBTKQ9P2D0 1353 aaPredicted RBP18.32■□□□□ 0.52
PRNP-201ENST00000379440 LMTK3Q96Q04 1460 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 HSCBQ8IWL3 235 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 MAP3K2Q9Y2U5 619 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 SSH3Q8TE77 659 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 RBM42Q9BTD8 480 aaKnown RBP18.32■□□□□ 0.52
PRNP-201ENST00000379440 OSBPL3Q9H4L5 887 aa18.32■□□□□ 0.52
PRNP-201ENST00000379440 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
PRNP-201ENST00000379440 CYP27B1O15528 508 aa18.31■□□□□ 0.52
PRNP-201ENST00000379440 RBM10P98175 930 aaKnown RBP18.31■□□□□ 0.52
PRNP-201ENST00000379440 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
PRNP-201ENST00000379440 STRCQ7RTU9 1775 aa18.31■□□□□ 0.52
PRNP-201ENST00000379440 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
PRNP-201ENST00000379440 SALL3Q9BXA9 1300 aa18.3■□□□□ 0.52
PRNP-201ENST00000379440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.3■□□□□ 0.52
PRNP-201ENST00000379440 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
PRNP-201ENST00000379440 SRGAP3O43295 1099 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 CPDO75976 1380 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
PRNP-201ENST00000379440 CD2BP2O95400 341 aaKnown RBP18.29■□□□□ 0.52
PRNP-201ENST00000379440 POLA2Q14181 598 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 PDIA6Q15084 440 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 SNX21Q969T3 373 aa18.29■□□□□ 0.52
PRNP-201ENST00000379440 MX1P20591 662 aa18.28■□□□□ 0.52
PRNP-201ENST00000379440 CWF19L2Q2TBE0 894 aaKnown RBP18.28■□□□□ 0.52
PRNP-201ENST00000379440 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
PRNP-201ENST00000379440 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
PRNP-201ENST00000379440 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
PRNP-201ENST00000379440 ZNF496Q96IT1 587 aaPredicted RBP18.27■□□□□ 0.52
PRNP-201ENST00000379440 PRDM11Q9NQV5 511 aa18.27■□□□□ 0.52
PRNP-201ENST00000379440 DDX21Q9NR30 783 aaKnown RBP eCLIP18.27■□□□□ 0.52
PRNP-201ENST00000379440 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
PRNP-201ENST00000379440 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
PRNP-201ENST00000379440 MYL6BP14649 208 aa18.26■□□□□ 0.51
PRNP-201ENST00000379440 SOS2Q07890 1332 aaPredicted RBP18.26■□□□□ 0.51
PRNP-201ENST00000379440 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
PRNP-201ENST00000379440 C9orf78Q9NZ63 289 aaPredicted RBP18.26■□□□□ 0.51
PRNP-201ENST00000379440 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
PRNP-201ENST00000379440 USP16Q9Y5T5 823 aa18.25■□□□□ 0.51
PRNP-201ENST00000379440 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
PRNP-201ENST00000379440 PIP4K2AP48426 406 aaPredicted RBP18.24■□□□□ 0.51
PRNP-201ENST00000379440 TOM1L2Q6ZVM7 507 aa18.24■□□□□ 0.51
PRNP-201ENST00000379440 RHPN1Q8TCX5 695 aa18.24■□□□□ 0.51
PRNP-201ENST00000379440 ABCC6O95255 1503 aa18.24■□□□□ 0.51
PRNP-201ENST00000379440 RAB11FIP3O75154 756 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 C5P01031 1676 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 HSP90AB1P08238 724 aaKnown RBP18.23■□□□□ 0.51
PRNP-201ENST00000379440 RILPL2Q969X0 211 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 STAP2Q9UGK3 403 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 CABP4P57796 275 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 TTC5Q8N0Z6 440 aa18.23■□□□□ 0.51
PRNP-201ENST00000379440 WDR17Q8IZU2 1322 aa18.22■□□□□ 0.51
PRNP-201ENST00000379440 DDX58O95786 925 aaKnown RBP18.22■□□□□ 0.51
PRNP-201ENST00000379440 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
PRNP-201ENST00000379440 CHMP5Q9NZZ3 219 aa18.22■□□□□ 0.51
PRNP-201ENST00000379440 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
PRNP-201ENST00000379440 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
PRNP-201ENST00000379440 XAGE3Q8WTP9 111 aa18.22■□□□□ 0.51
PRNP-201ENST00000379440 ERC2O15083 957 aa18.21■□□□□ 0.51
PRNP-201ENST00000379440 COPS6Q7L5N1 327 aa18.21■□□□□ 0.51
PRNP-201ENST00000379440 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
PRNP-201ENST00000379440 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
PRNP-201ENST00000379440 IGKV5-2P06315 115 aa18.2■□□□□ 0.5
PRNP-201ENST00000379440 SNRPA1P09661 255 aaKnown RBP18.2■□□□□ 0.5
PRNP-201ENST00000379440 KIF1BPQ96EK5 621 aa18.2■□□□□ 0.5
PRNP-201ENST00000379440 BCL11BQ9C0K0 894 aaPredicted RBP18.2■□□□□ 0.5
PRNP-201ENST00000379440 K7ELQ4 463 aaPredicted RBP18.2■□□□□ 0.5
PRNP-201ENST00000379440 REC8O95072 547 aa18.2■□□□□ 0.5
PRNP-201ENST00000379440 GRM8O00222 908 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 MTX1Q13505 466 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 GSE1Q14687 1217 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 KAZALD1Q96I82 304 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 FMNL2Q96PY5 1086 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 STRN4Q9NRL3 753 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
PRNP-201ENST00000379440 MAP4K4O95819 1239 aaPredicted RBP18.19■□□□□ 0.5
PRNP-201ENST00000379440 DDIT3P35638 169 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
PRNP-201ENST00000379440 MRC1P22897 1456 aa18.19■□□□□ 0.5
PRNP-201ENST00000379440 OS9Q13438 667 aaPredicted RBP18.18■□□□□ 0.5
PRNP-201ENST00000379440 TUBGCP6Q96RT7 1819 aa18.18■□□□□ 0.5
PRNP-201ENST00000379440 CHMLP26374 656 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms