RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CYP46A1Q9Y6A2 500 aa12.8□□□□□ -0.36
USP6NL-202ENST00000379237 SERPINC1P01008 464 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 CCDC172P0C7W6 258 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 RBM6P78332 1123 aaKnown RBP12.79□□□□□ -0.36
USP6NL-202ENST00000379237 ST5P78524 1137 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 EP400NLQ6ZTU2 488 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
USP6NL-202ENST00000379237 FAM107BQ9H098 131 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
USP6NL-202ENST00000379237 GNG11P61952 73 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 MAGI2Q86UL8 1455 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 FAM173BQ6P4H8 233 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
USP6NL-202ENST00000379237 RAD50Q92878 1312 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 GOLIM4O00461 696 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 ACTN2P35609 894 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 GBP6Q6ZN66 633 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 FBXO18Q8NFZ0 1043 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 SRRTQ9BXP5 876 aaKnown RBP12.78□□□□□ -0.36
USP6NL-202ENST00000379237 LRRCC1Q9C099 1032 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 ANO10Q9NW15 660 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 USP27XA6NNY8 438 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 GUCY2CP25092 1073 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 ANAPC15P60006 121 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 SRLQ86TD4 932 aa12.78□□□□□ -0.36
USP6NL-202ENST00000379237 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.36
USP6NL-202ENST00000379237 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.36
USP6NL-202ENST00000379237 ARID5BQ14865 1188 aa12.77□□□□□ -0.36
USP6NL-202ENST00000379237 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.36
USP6NL-202ENST00000379237 CDR1P51861 262 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 STX1AQ16623 288 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 PPP6R1Q9UPN7 881 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.37
USP6NL-202ENST00000379237 ZSCAN12O43309 604 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 CAVIN2O95810 425 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 GGT6Q6P531 493 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 CWC27Q6UX04 472 aaKnown RBP12.77□□□□□ -0.37
USP6NL-202ENST00000379237 DDX11Q96FC9 970 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 STK26Q9P289 416 aa12.77□□□□□ -0.37
USP6NL-202ENST00000379237 ME1P48163 572 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 PDE1AP54750 535 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 NECAB1Q8N987 351 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 SMARCC1Q92922 1105 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-202ENST00000379237 STK31Q9BXU1 1019 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 MAGEA9P43362 315 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 PPP2R5AQ15172 486 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 LRCH2Q5VUJ6 765 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 RPAINQ86UA6 219 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 IL1RAPL2Q9NP60 686 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 MRVI1Q9Y6F6 885 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 LIG1P18858 919 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-202ENST00000379237 NF2P35240 595 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
USP6NL-202ENST00000379237 CFAP100Q494V2 611 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 NBPF11Q86T75 865 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 AOPEPQ8N6M6 819 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
USP6NL-202ENST00000379237 ATAD2Q6PL18 1390 aa12.76□□□□□ -0.37
USP6NL-202ENST00000379237 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 FAM212AQ96EL1 285 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 SOX12O15370 315 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 AK2P54819 239 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 TERF2IPQ9NYB0 399 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 ADAM21Q9UKJ8 722 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 CXorf56Q9H5V9 222 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 ELP1O95163 1332 aa12.75□□□□□ -0.37
USP6NL-202ENST00000379237 ZNF608Q9ULD9 1512 aaPredicted RBP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 DNAJC21Q5F1R6 531 aaKnown RBP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 EIF3CLB5ME19 914 aaKnown RBP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 ERLIN2O94905 339 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 MUM1L1Q5H9M0 696 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 MCTP2Q6DN12 878 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 LMOD2Q6P5Q4 547 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 CNTROBQ8N137 903 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 KIF1BPQ96EK5 621 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 EIF3CQ99613 913 aaKnown RBP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 SARNPP82979 210 aaKnown RBP12.74□□□□□ -0.37
USP6NL-202ENST00000379237 CUL4AQ13619 759 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 RUFY1Q96T51 708 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 PLEKHA4Q9H4M7 779 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 LCMT1Q9UIC8 334 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 CFAP45Q9UL16 551 aa12.74□□□□□ -0.37
USP6NL-202ENST00000379237 CPA1P15085 419 aa12.73□□□□□ -0.37
USP6NL-202ENST00000379237 CCDC12Q8WUD4 166 aaPredicted RBP12.73□□□□□ -0.37
USP6NL-202ENST00000379237 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
USP6NL-202ENST00000379237 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
USP6NL-202ENST00000379237 AP5Z1O43299 807 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms