RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 KIAA1551Q9HCM1 1747 aa18.58■□□□□ 0.56
PCNA-202ENST00000379160 CCDC87Q9NVE4 849 aa18.57■□□□□ 0.56
PCNA-202ENST00000379160 SRP68Q9UHB9 627 aaKnown RBP18.57■□□□□ 0.56
PCNA-202ENST00000379160 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
PCNA-202ENST00000379160 CEP350Q5VT06 3117 aa18.56■□□□□ 0.56
PCNA-202ENST00000379160 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
PCNA-202ENST00000379160 TGFB2P61812 414 aa18.56■□□□□ 0.56
PCNA-202ENST00000379160 SLC39A6Q13433 755 aa18.56■□□□□ 0.56
PCNA-202ENST00000379160 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
PCNA-202ENST00000379160 BCS1LQ9Y276 419 aa18.56■□□□□ 0.56
PCNA-202ENST00000379160 ADCY9O60503 1353 aa18.56■□□□□ 0.56
PCNA-202ENST00000379160 DNAJC10Q8IXB1 793 aa18.55■□□□□ 0.56
PCNA-202ENST00000379160 DPEP1P16444 411 aa18.55■□□□□ 0.56
PCNA-202ENST00000379160 INTS5Q6P9B9 1019 aaKnown RBP18.55■□□□□ 0.56
PCNA-202ENST00000379160 USP42Q9H9J4 1324 aaKnown RBP18.54■□□□□ 0.56
PCNA-202ENST00000379160 MRC1P22897 1456 aa18.52■□□□□ 0.56
PCNA-202ENST00000379160 U2SURPO15042 1029 aaKnown RBP18.52■□□□□ 0.55
PCNA-202ENST00000379160 DDR1Q08345 913 aa18.51■□□□□ 0.55
PCNA-202ENST00000379160 ADAMTS7Q9UKP4 1686 aa18.51■□□□□ 0.55
PCNA-202ENST00000379160 BRCA1P38398 1863 aaKnown RBP18.5■□□□□ 0.55
PCNA-202ENST00000379160 COL3A1P02461 1466 aaPredicted RBP18.5■□□□□ 0.55
PCNA-202ENST00000379160 ZPR1O75312 459 aa18.5■□□□□ 0.55
PCNA-202ENST00000379160 FCHSD2O94868 740 aa18.5■□□□□ 0.55
PCNA-202ENST00000379160 CYP19A1P11511 503 aaPredicted RBP18.5■□□□□ 0.55
PCNA-202ENST00000379160 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
PCNA-202ENST00000379160 ARHGAP27Q6ZUM4 889 aa18.5■□□□□ 0.55
PCNA-202ENST00000379160 KCPQ6ZWJ8 1503 aa18.5■□□□□ 0.55
PCNA-202ENST00000379160 KCNA3P22001 575 aa18.49■□□□□ 0.55
PCNA-202ENST00000379160 SOS1Q07889 1333 aaPredicted RBP18.49■□□□□ 0.55
PCNA-202ENST00000379160 NPC1L1Q9UHC9 1359 aa18.49■□□□□ 0.55
PCNA-202ENST00000379160 POLRMTO00411 1230 aaKnown RBP18.47■□□□□ 0.55
PCNA-202ENST00000379160 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
PCNA-202ENST00000379160 ZBTB1Q9Y2K1 713 aa18.47■□□□□ 0.55
PCNA-202ENST00000379160 TM4SF1P30408 202 aa18.46■□□□□ 0.55
PCNA-202ENST00000379160 TTC5Q8N0Z6 440 aa18.46■□□□□ 0.55
PCNA-202ENST00000379160 COL15A1P39059 1388 aa18.46■□□□□ 0.55
PCNA-202ENST00000379160 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
PCNA-202ENST00000379160 CHRNA5P30532 468 aa18.45■□□□□ 0.54
PCNA-202ENST00000379160 VSIG10Q8N0Z9 540 aa18.45■□□□□ 0.54
PCNA-202ENST00000379160 NARFQ9UHQ1 456 aa18.45■□□□□ 0.54
PCNA-202ENST00000379160 ARFGEF1Q9Y6D6 1849 aa18.45■□□□□ 0.54
PCNA-202ENST00000379160 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
PCNA-202ENST00000379160 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
PCNA-202ENST00000379160 TEFQ10587 303 aa18.44■□□□□ 0.54
PCNA-202ENST00000379160 DALRD3Q5D0E6 543 aaKnown RBP18.44■□□□□ 0.54
PCNA-202ENST00000379160 IL17REQ8NFR9 667 aa18.44■□□□□ 0.54
PCNA-202ENST00000379160 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
PCNA-202ENST00000379160 KIF3CO14782 793 aa18.43■□□□□ 0.54
PCNA-202ENST00000379160 NFIXQ14938 502 aa18.43■□□□□ 0.54
PCNA-202ENST00000379160 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
PCNA-202ENST00000379160 STARD3NLO95772 234 aa18.42■□□□□ 0.54
PCNA-202ENST00000379160 ZNF790Q6PG37 636 aa18.42■□□□□ 0.54
PCNA-202ENST00000379160 ZNF496Q96IT1 587 aaPredicted RBP18.42■□□□□ 0.54
PCNA-202ENST00000379160 BCL2L12Q9HB09 334 aa18.42■□□□□ 0.54
PCNA-202ENST00000379160 HSPA6P17066 643 aa18.41■□□□□ 0.54
PCNA-202ENST00000379160 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
PCNA-202ENST00000379160 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
PCNA-202ENST00000379160 PHACTR3Q96KR7 559 aa18.41■□□□□ 0.54
PCNA-202ENST00000379160 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
PCNA-202ENST00000379160 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
PCNA-202ENST00000379160 HEG1Q9ULI3 1381 aa18.39■□□□□ 0.53
PCNA-202ENST00000379160 SERPINB2P05120 415 aa18.39■□□□□ 0.53
PCNA-202ENST00000379160 EIF5P55010 431 aaKnown RBP18.39■□□□□ 0.53
PCNA-202ENST00000379160 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
PCNA-202ENST00000379160 RSPH6AQ9H0K4 717 aa18.39■□□□□ 0.53
PCNA-202ENST00000379160 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
PCNA-202ENST00000379160 NRXN2Q9P2S2 1712 aa18.38■□□□□ 0.53
PCNA-202ENST00000379160 NMRK2Q9NPI5 230 aa18.38■□□□□ 0.53
PCNA-202ENST00000379160 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
PCNA-202ENST00000379160 NUDCQ9Y266 331 aa18.37■□□□□ 0.53
PCNA-202ENST00000379160 A0A087WZG4 1122 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 PITPNM1O00562 1244 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 KCNQ3O43525 872 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 U2AF1L5P0DN76 240 aaPredicted RBP18.36■□□□□ 0.53
PCNA-202ENST00000379160 PPP2R1AP30153 589 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 U2AF1Q01081 240 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCNA-202ENST00000379160 FMNL2Q96PY5 1086 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 RNF181Q9P0P0 153 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 TBC1D2BQ9UPU7 963 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
PCNA-202ENST00000379160 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
PCNA-202ENST00000379160 SBF1O95248 1867 aa18.35■□□□□ 0.53
PCNA-202ENST00000379160 TOMM70O94826 608 aa18.34■□□□□ 0.53
PCNA-202ENST00000379160 A1BGP04217 495 aa18.34■□□□□ 0.53
PCNA-202ENST00000379160 TBC1D9BQ66K14 1250 aa18.34■□□□□ 0.53
PCNA-202ENST00000379160 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
PCNA-202ENST00000379160 CARMIL3Q8ND23 1372 aa18.34■□□□□ 0.53
PCNA-202ENST00000379160 DLEC1Q9Y238 1755 aa18.33■□□□□ 0.52
PCNA-202ENST00000379160 SCN7AQ01118 1682 aa18.32■□□□□ 0.52
PCNA-202ENST00000379160 H0YIN7 160 aa18.32■□□□□ 0.52
PCNA-202ENST00000379160 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
PCNA-202ENST00000379160 RASSF7Q02833 373 aa18.32■□□□□ 0.52
PCNA-202ENST00000379160 MCM10Q7L590 875 aa18.32■□□□□ 0.52
PCNA-202ENST00000379160 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
PCNA-202ENST00000379160 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
PCNA-202ENST00000379160 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
PCNA-202ENST00000379160 RTF1Q92541 710 aaKnown RBP18.31■□□□□ 0.52
PCNA-202ENST00000379160 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
PCNA-202ENST00000379160 USP16Q9Y5T5 823 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms