RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 C1orf115Q9H7X2 142 aa22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 LAMB4A4D0S4 1761 aa22.13■■□□□ 1.13
LYSMD4-203ENST00000378904 PXDNLA1KZ92 1463 aa22.12■■□□□ 1.13
LYSMD4-203ENST00000378904 BCL9LQ86UU0 1499 aa22.12■■□□□ 1.13
LYSMD4-203ENST00000378904 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
LYSMD4-203ENST00000378904 TMOD3Q9NYL9 352 aa22.1■■□□□ 1.13
LYSMD4-203ENST00000378904 KCPQ6ZWJ8 1503 aa22.1■■□□□ 1.13
LYSMD4-203ENST00000378904 BARGINQ6ZT62 677 aa22.1■■□□□ 1.13
LYSMD4-203ENST00000378904 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
LYSMD4-203ENST00000378904 DDB1Q16531 1140 aa22.09■■□□□ 1.13
LYSMD4-203ENST00000378904 USP16Q9Y5T5 823 aa22.09■■□□□ 1.13
LYSMD4-203ENST00000378904 KAT6BQ8WYB5 2073 aa22.09■■□□□ 1.13
LYSMD4-203ENST00000378904 PDIA6Q15084 440 aa22.09■■□□□ 1.13
LYSMD4-203ENST00000378904 FNBP4Q8N3X1 1017 aaPredicted RBP22.09■■□□□ 1.13
LYSMD4-203ENST00000378904 HYPKQ9NX55 129 aa22.09■■□□□ 1.13
LYSMD4-203ENST00000378904 MEIS3Q99687 375 aa22.08■■□□□ 1.13
LYSMD4-203ENST00000378904 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
LYSMD4-203ENST00000378904 VPS72Q15906 364 aa22.07■■□□□ 1.12
LYSMD4-203ENST00000378904 DOT1LQ8TEK3 1739 aa22.07■■□□□ 1.12
LYSMD4-203ENST00000378904 PI4KAP2A4QPH2 592 aa22.06■■□□□ 1.12
LYSMD4-203ENST00000378904 PI4KAP1Q8N8J0 262 aa22.06■■□□□ 1.12
LYSMD4-203ENST00000378904 PIGBQ92521 554 aa22.06■■□□□ 1.12
LYSMD4-203ENST00000378904 ADCY9O60503 1353 aa22.05■■□□□ 1.12
LYSMD4-203ENST00000378904 DNAAF4Q8WXU2 420 aa22.05■■□□□ 1.12
LYSMD4-203ENST00000378904 ERICH6Q7L0X2 663 aa22.04■■□□□ 1.12
LYSMD4-203ENST00000378904 PTCD1O75127 700 aaKnown RBP22.04■■□□□ 1.12
LYSMD4-203ENST00000378904 SIRT2Q8IXJ6 389 aa22.04■■□□□ 1.12
LYSMD4-203ENST00000378904 USP21Q9UK80 565 aa22.04■■□□□ 1.12
LYSMD4-203ENST00000378904 PDZRN3Q9UPQ7 1066 aa22.04■■□□□ 1.12
LYSMD4-203ENST00000378904 BCL9O00512 1426 aa22.03■■□□□ 1.12
LYSMD4-203ENST00000378904 MYL6BP14649 208 aa22.03■■□□□ 1.12
LYSMD4-203ENST00000378904 RGS3P49796 1198 aa22.03■■□□□ 1.12
LYSMD4-203ENST00000378904 SMC5Q8IY18 1101 aa22.03■■□□□ 1.12
LYSMD4-203ENST00000378904 ATP10DQ9P241 1426 aa22.03■■□□□ 1.12
LYSMD4-203ENST00000378904 FAM98CQ17RN3 349 aaKnown RBP22.02■■□□□ 1.12
LYSMD4-203ENST00000378904 MEX3CQ5U5Q3 659 aaKnown RBP22.02■■□□□ 1.12
LYSMD4-203ENST00000378904 KSR2Q6VAB6 950 aa22.02■■□□□ 1.12
LYSMD4-203ENST00000378904 SRCIN1Q9C0H9 1055 aa22.02■■□□□ 1.12
LYSMD4-203ENST00000378904 ASAP1Q9ULH1 1129 aa22.02■■□□□ 1.12
LYSMD4-203ENST00000378904 AIMP1Q12904 312 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-203ENST00000378904 MARCH10Q8NA82 808 aaPredicted RBP22.01■■□□□ 1.11
LYSMD4-203ENST00000378904 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
LYSMD4-203ENST00000378904 DDX58O95786 925 aaKnown RBP22.01■■□□□ 1.11
LYSMD4-203ENST00000378904 BEND3Q5T5X7 828 aa22.01■■□□□ 1.11
LYSMD4-203ENST00000378904 ATG3Q9NT62 314 aa22.01■■□□□ 1.11
LYSMD4-203ENST00000378904 GNAI3P08754 354 aa22■■□□□ 1.11
LYSMD4-203ENST00000378904 LRP10Q7Z4F1 713 aa22■■□□□ 1.11
LYSMD4-203ENST00000378904 RPAP2Q8IXW5 612 aaPredicted RBP22■■□□□ 1.11
LYSMD4-203ENST00000378904 ANKRD44Q8N8A2 993 aa22■■□□□ 1.11
LYSMD4-203ENST00000378904 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
LYSMD4-203ENST00000378904 PIP4K2AP48426 406 aaPredicted RBP22■■□□□ 1.11
LYSMD4-203ENST00000378904 CEP85Q6P2H3 762 aa22■■□□□ 1.11
LYSMD4-203ENST00000378904 ERBB4Q15303 1308 aa21.99■■□□□ 1.11
LYSMD4-203ENST00000378904 XAGE3Q8WTP9 111 aa21.99■■□□□ 1.11
LYSMD4-203ENST00000378904 USP44Q9H0E7 712 aa21.99■■□□□ 1.11
LYSMD4-203ENST00000378904 GNAI2P04899 355 aa21.98■■□□□ 1.11
LYSMD4-203ENST00000378904 PRIM1P49642 420 aaKnown RBP21.98■■□□□ 1.11
LYSMD4-203ENST00000378904 COPS6Q7L5N1 327 aa21.98■■□□□ 1.11
LYSMD4-203ENST00000378904 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
LYSMD4-203ENST00000378904 VSIG10Q8N0Z9 540 aa21.97■■□□□ 1.11
LYSMD4-203ENST00000378904 NBPF26B4DH59 902 aa21.95■■□□□ 1.11
LYSMD4-203ENST00000378904 NBPF14Q5TI25 921 aa21.95■■□□□ 1.11
LYSMD4-203ENST00000378904 NBPF10Q6P3W6 841 aaKnown RBP21.95■■□□□ 1.11
LYSMD4-203ENST00000378904 RIC3Q7Z5B4 369 aa21.95■■□□□ 1.11
LYSMD4-203ENST00000378904 NBPF15Q8N660 670 aa21.95■■□□□ 1.11
LYSMD4-203ENST00000378904 AFF2P51816 1311 aa21.95■■□□□ 1.1
LYSMD4-203ENST00000378904 UBTFL1P0CB47 393 aaPredicted RBP21.95■■□□□ 1.1
LYSMD4-203ENST00000378904 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
LYSMD4-203ENST00000378904 ARFGEF2Q9Y6D5 1785 aa21.95■■□□□ 1.1
LYSMD4-203ENST00000378904 ALDH1L1O75891 902 aa21.94■■□□□ 1.1
LYSMD4-203ENST00000378904 A1BGP04217 495 aa21.94■■□□□ 1.1
LYSMD4-203ENST00000378904 ACSBG1Q96GR2 724 aa21.94■■□□□ 1.1
LYSMD4-203ENST00000378904 THSD7AQ9UPZ6 1657 aa21.94■■□□□ 1.1
LYSMD4-203ENST00000378904 NUCB1Q02818 461 aa21.94■■□□□ 1.1
LYSMD4-203ENST00000378904 TEX13AQ9BXU3 409 aaPredicted RBP21.94■■□□□ 1.1
LYSMD4-203ENST00000378904 ANKRD13DQ6ZTN6 518 aa21.93■■□□□ 1.1
LYSMD4-203ENST00000378904 LRRFIP2Q9Y608 721 aaKnown RBP21.93■■□□□ 1.1
LYSMD4-203ENST00000378904 DNAJC10Q8IXB1 793 aa21.92■■□□□ 1.1
LYSMD4-203ENST00000378904 LINS1Q8NG48 757 aa21.92■■□□□ 1.1
LYSMD4-203ENST00000378904 DCTPP1Q9H773 170 aa21.92■■□□□ 1.1
LYSMD4-203ENST00000378904 A0A0G2JS52 829 aa21.92■■□□□ 1.1
LYSMD4-203ENST00000378904 CWF19L2Q2TBE0 894 aaKnown RBP21.92■■□□□ 1.1
LYSMD4-203ENST00000378904 HMMRO75330 724 aa21.91■■□□□ 1.1
LYSMD4-203ENST00000378904 NBPF7P0C2Y1 421 aaPredicted RBP21.91■■□□□ 1.1
LYSMD4-203ENST00000378904 PDE4AP27815 886 aa21.91■■□□□ 1.1
LYSMD4-203ENST00000378904 CHD1LQ86WJ1 897 aa21.91■■□□□ 1.1
LYSMD4-203ENST00000378904 METTL22Q9BUU2 404 aaPredicted RBP21.91■■□□□ 1.1
LYSMD4-203ENST00000378904 TJP1Q07157 1748 aa21.9■■□□□ 1.1
LYSMD4-203ENST00000378904 ANKRD45Q5TZF3 282 aa21.9■■□□□ 1.1
LYSMD4-203ENST00000378904 GJD4Q96KN9 370 aaPredicted RBP21.9■■□□□ 1.1
LYSMD4-203ENST00000378904 SLC4A9Q96Q91 983 aa21.9■■□□□ 1.1
LYSMD4-203ENST00000378904 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
LYSMD4-203ENST00000378904 NUP188Q5SRE5 1749 aa21.89■■□□□ 1.1
LYSMD4-203ENST00000378904 NEXNQ0ZGT2 675 aa21.89■■□□□ 1.1
LYSMD4-203ENST00000378904 LNPKQ9C0E8 428 aa21.89■■□□□ 1.1
LYSMD4-203ENST00000378904 IGKV5-2P06315 115 aa21.89■■□□□ 1.09
LYSMD4-203ENST00000378904 ATP8B2P98198 1209 aa21.89■■□□□ 1.09
LYSMD4-203ENST00000378904 PLBD2Q8NHP8 589 aa21.89■■□□□ 1.09
LYSMD4-203ENST00000378904 ATRNO75882 1429 aa21.89■■□□□ 1.09
LYSMD4-203ENST00000378904 STARD3NLO95772 234 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms