RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ZBTB1Q9Y2K1 713 aa25.28■■□□□ 1.64
TMEM88B-201ENST00000378821 DDR1Q08345 913 aa25.27■■□□□ 1.64
TMEM88B-201ENST00000378821 HEG1Q9ULI3 1381 aa25.27■■□□□ 1.64
TMEM88B-201ENST00000378821 TEX13AQ9BXU3 409 aaPredicted RBP25.26■■□□□ 1.63
TMEM88B-201ENST00000378821 ADCY9O60503 1353 aa25.26■■□□□ 1.63
TMEM88B-201ENST00000378821 COL15A1P39059 1388 aa25.26■■□□□ 1.63
TMEM88B-201ENST00000378821 A0A0G2JLW4 131 aa25.25■■□□□ 1.63
TMEM88B-201ENST00000378821 ZPR1O75312 459 aa25.25■■□□□ 1.63
TMEM88B-201ENST00000378821 STARD3NLO95772 234 aa25.25■■□□□ 1.63
TMEM88B-201ENST00000378821 KCNA3P22001 575 aa25.25■■□□□ 1.63
TMEM88B-201ENST00000378821 USPL1Q5W0Q7 1092 aa25.25■■□□□ 1.63
TMEM88B-201ENST00000378821 POLRMTO00411 1230 aaKnown RBP25.24■■□□□ 1.63
TMEM88B-201ENST00000378821 EIF5P55010 431 aaKnown RBP25.24■■□□□ 1.63
TMEM88B-201ENST00000378821 NRXN2Q9P2S2 1712 aa25.23■■□□□ 1.63
TMEM88B-201ENST00000378821 HTATSF1O43719 755 aaKnown RBP25.23■■□□□ 1.63
TMEM88B-201ENST00000378821 DPEP1P16444 411 aa25.23■■□□□ 1.63
TMEM88B-201ENST00000378821 FMNL2Q96PY5 1086 aa25.22■■□□□ 1.63
TMEM88B-201ENST00000378821 BCL2L12Q9HB09 334 aa25.22■■□□□ 1.63
TMEM88B-201ENST00000378821 WWC3Q9ULE0 1092 aa25.21■■□□□ 1.63
TMEM88B-201ENST00000378821 AFDNP55196 1824 aaKnown RBP25.21■■□□□ 1.63
TMEM88B-201ENST00000378821 BTBD11A6QL63 1104 aa25.2■■□□□ 1.62
TMEM88B-201ENST00000378821 ARFGEF1Q9Y6D6 1849 aa25.2■■□□□ 1.62
TMEM88B-201ENST00000378821 ATP10DQ9P241 1426 aa25.2■■□□□ 1.62
TMEM88B-201ENST00000378821 KCNQ3O43525 872 aa25.19■■□□□ 1.62
TMEM88B-201ENST00000378821 C1QTNF8P60827 252 aa25.19■■□□□ 1.62
TMEM88B-201ENST00000378821 NFIXQ14938 502 aa25.19■■□□□ 1.62
TMEM88B-201ENST00000378821 A0A087WZG4 1122 aa25.18■■□□□ 1.62
TMEM88B-201ENST00000378821 CANXP27824 592 aaKnown RBP25.18■■□□□ 1.62
TMEM88B-201ENST00000378821 ZNF316A6NFI3 1004 aaPredicted RBP25.17■■□□□ 1.62
TMEM88B-201ENST00000378821 RTF1Q92541 710 aaKnown RBP25.17■■□□□ 1.62
TMEM88B-201ENST00000378821 PLEKHF1Q96S99 279 aa25.17■■□□□ 1.62
TMEM88B-201ENST00000378821 BCS1LQ9Y276 419 aa25.17■■□□□ 1.62
TMEM88B-201ENST00000378821 IL6STP40189 918 aaPredicted RBP25.16■■□□□ 1.62
TMEM88B-201ENST00000378821 MCM10Q7L590 875 aa25.16■■□□□ 1.62
TMEM88B-201ENST00000378821 GIGYF1O75420 1035 aaPredicted RBP25.15■■□□□ 1.62
TMEM88B-201ENST00000378821 PIM2Q9P1W9 311 aa25.15■■□□□ 1.62
TMEM88B-201ENST00000378821 SCN7AQ01118 1682 aa25.15■■□□□ 1.62
TMEM88B-201ENST00000378821 DLG5Q8TDM6 1919 aa25.15■■□□□ 1.62
TMEM88B-201ENST00000378821 A1BGP04217 495 aa25.12■■□□□ 1.61
TMEM88B-201ENST00000378821 DCTN1Q14203 1278 aa25.12■■□□□ 1.61
TMEM88B-201ENST00000378821 RALBP1Q15311 655 aa25.12■■□□□ 1.61
TMEM88B-201ENST00000378821 DLEC1Q9Y238 1755 aa25.11■■□□□ 1.61
TMEM88B-201ENST00000378821 SERPINB2P05120 415 aa25.11■■□□□ 1.61
TMEM88B-201ENST00000378821 TAF7Q15545 349 aaPredicted RBP25.11■■□□□ 1.61
TMEM88B-201ENST00000378821 USP16Q9Y5T5 823 aa25.11■■□□□ 1.61
TMEM88B-201ENST00000378821 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
TMEM88B-201ENST00000378821 DALRD3Q5D0E6 543 aaKnown RBP25.1■■□□□ 1.61
TMEM88B-201ENST00000378821 CHRNA5P30532 468 aa25.09■■□□□ 1.61
TMEM88B-201ENST00000378821 BCORQ6W2J9 1755 aa25.08■■□□□ 1.61
TMEM88B-201ENST00000378821 TBC1D9BQ66K14 1250 aa25.08■■□□□ 1.61
TMEM88B-201ENST00000378821 ARHGAP27Q6ZUM4 889 aa25.08■■□□□ 1.61
TMEM88B-201ENST00000378821 GPBP1L1Q9HC44 474 aaPredicted RBP25.08■■□□□ 1.61
TMEM88B-201ENST00000378821 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
TMEM88B-201ENST00000378821 PRAMEF22A3QJZ6 481 aa25.07■■□□□ 1.6
TMEM88B-201ENST00000378821 CAMTA2O94983 1202 aa25.07■■□□□ 1.6
TMEM88B-201ENST00000378821 PNNQ9H307 717 aaKnown RBP25.07■■□□□ 1.6
TMEM88B-201ENST00000378821 KDM3BQ7LBC6 1761 aa25.07■■□□□ 1.6
TMEM88B-201ENST00000378821 NEFMP07197 916 aa25.06■■□□□ 1.6
TMEM88B-201ENST00000378821 NFE2L2Q16236 605 aa25.06■■□□□ 1.6
TMEM88B-201ENST00000378821 MYBBP1AQ9BQG0 1328 aaKnown RBP25.05■■□□□ 1.6
TMEM88B-201ENST00000378821 ANKRD31Q8N7Z5 1873 aa25.04■■□□□ 1.6
TMEM88B-201ENST00000378821 RGL2O15211 777 aa25.04■■□□□ 1.6
TMEM88B-201ENST00000378821 CARMIL3Q8ND23 1372 aa25.04■■□□□ 1.6
TMEM88B-201ENST00000378821 SBF1O95248 1867 aa25.03■■□□□ 1.6
TMEM88B-201ENST00000378821 PNISRQ8TF01 805 aaKnown RBP25.03■■□□□ 1.6
TMEM88B-201ENST00000378821 LAMB4A4D0S4 1761 aa25.03■■□□□ 1.6
TMEM88B-201ENST00000378821 NBPF26B4DH59 902 aa25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 NBPF10Q6P3W6 841 aaKnown RBP25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 BICDL1Q6ZP65 573 aa25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 DZIP3Q86Y13 1208 aaKnown RBP25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 NBPF15Q8N660 670 aa25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 PRKRIP1Q9H875 184 aaPredicted RBP25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 PDZRN3Q9UPQ7 1066 aa25.02■■□□□ 1.6
TMEM88B-201ENST00000378821 NPM2Q86SE8 214 aaKnown RBP25.01■■□□□ 1.59
TMEM88B-201ENST00000378821 BRIP1Q9BX63 1249 aa25.01■■□□□ 1.59
TMEM88B-201ENST00000378821 MIS18AQ9NYP9 233 aa25.01■■□□□ 1.59
TMEM88B-201ENST00000378821 ZNF330Q9Y3S2 320 aaPredicted RBP25.01■■□□□ 1.59
TMEM88B-201ENST00000378821 PRR5LQ6MZQ0 368 aa25■■□□□ 1.59
TMEM88B-201ENST00000378821 KIF3CO14782 793 aa24.99■■□□□ 1.59
TMEM88B-201ENST00000378821 C2CD5Q86YS7 1000 aa24.99■■□□□ 1.59
TMEM88B-201ENST00000378821 ZNF526Q8TF50 670 aaPredicted RBP24.99■■□□□ 1.59
TMEM88B-201ENST00000378821 SETDB2Q96T68 719 aa24.99■■□□□ 1.59
TMEM88B-201ENST00000378821 MAPK8IP3Q9UPT6 1336 aa24.98■■□□□ 1.59
TMEM88B-201ENST00000378821 H0YIN7 160 aa24.98■■□□□ 1.59
TMEM88B-201ENST00000378821 PIP4K2AP48426 406 aaPredicted RBP24.98■■□□□ 1.59
TMEM88B-201ENST00000378821 C9orf131Q5VYM1 1079 aa24.98■■□□□ 1.59
TMEM88B-201ENST00000378821 TTLL6Q8N841 843 aa24.98■■□□□ 1.59
TMEM88B-201ENST00000378821 SENP3-EIF4A1A0A087X0R7 540 aa24.97■■□□□ 1.59
TMEM88B-201ENST00000378821 EIF4A1P60842 406 aaKnown RBP24.97■■□□□ 1.59
TMEM88B-201ENST00000378821 PDE6BP35913 854 aa24.96■■□□□ 1.59
TMEM88B-201ENST00000378821 THUMPD2Q9BTF0 503 aaKnown RBP24.96■■□□□ 1.59
TMEM88B-201ENST00000378821 COL11A2P13942 1736 aaPredicted RBP24.95■■□□□ 1.59
TMEM88B-201ENST00000378821 CNBD1Q8NA66 436 aa24.94■■□□□ 1.58
TMEM88B-201ENST00000378821 ZNF652Q9Y2D9 606 aa24.94■■□□□ 1.58
TMEM88B-201ENST00000378821 BABAM1Q9NWV8 329 aa24.93■■□□□ 1.58
TMEM88B-201ENST00000378821 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
TMEM88B-201ENST00000378821 ZC3H4Q9UPT8 1303 aaKnown RBP24.91■■□□□ 1.58
TMEM88B-201ENST00000378821 RIPK4P57078 832 aa24.91■■□□□ 1.58
TMEM88B-201ENST00000378821 RNF181Q9P0P0 153 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms