RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 CTNNA2P26232 953 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
ITM2B-202ENST00000378565 BCAR3O75815 825 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.313e-6■■■□□ 16
ITM2B-202ENST00000378565 ZNF165P49910 485 aa13.11□□□□□ -0.31
ITM2B-202ENST00000378565 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
ITM2B-202ENST00000378565 TDRD12Q587J7 1177 aaKnown RBP13.11□□□□□ -0.31
ITM2B-202ENST00000378565 GOLGA1Q92805 767 aa13.11□□□□□ -0.31
ITM2B-202ENST00000378565 MAP4K4O95819 1239 aaPredicted RBP13.11□□□□□ -0.31
ITM2B-202ENST00000378565 IFI16Q16666 785 aaKnown RBP13.11□□□□□ -0.31
ITM2B-202ENST00000378565 OGFRQ9NZT2 677 aa13.11□□□□□ -0.31
ITM2B-202ENST00000378565 SUPT6HQ7KZ85 1726 aaKnown RBP13.11□□□□□ -0.31
ITM2B-202ENST00000378565 B4GALNT4Q76KP1 1039 aa13.11□□□□□ -0.31
ITM2B-202ENST00000378565 AACSQ86V21 672 aa13.11□□□□□ -0.31
ITM2B-202ENST00000378565 RASAL2Q9UJF2 1139 aa13.11□□□□□ -0.31
ITM2B-202ENST00000378565 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
ITM2B-202ENST00000378565 TOP2AP11388 1531 aaKnown RBP13.1□□□□□ -0.31
ITM2B-202ENST00000378565 FERMT3Q86UX7 667 aa13.1□□□□□ -0.31
ITM2B-202ENST00000378565 FAM184BQ9ULE4 1060 aa13.1□□□□□ -0.31
ITM2B-202ENST00000378565 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
ITM2B-202ENST00000378565 IQCGQ9H095 443 aaKnown RBP13.1□□□□□ -0.31
ITM2B-202ENST00000378565 ZSWIM4Q9H7M6 989 aa13.1□□□□□ -0.31
ITM2B-202ENST00000378565 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
ITM2B-202ENST00000378565 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
ITM2B-202ENST00000378565 PRPF4BQ13523 1007 aaKnown RBP13.09□□□□□ -0.31
ITM2B-202ENST00000378565 TSNARE1Q96NA8 513 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 PLVAPQ9BX97 442 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 TBC1D2Q9BYX2 928 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 WDR97A6NE52 1622 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 VPS18Q9P253 973 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
ITM2B-202ENST00000378565 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 SSFA2P28290 1259 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 MTHFSP49914 203 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 LACTBP83111 547 aaPredicted RBP13.09□□□□□ -0.31
ITM2B-202ENST00000378565 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 CTAGE15A4D2H0 777 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 GOLIM4O00461 696 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 CTAGE8P0CG41 777 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 CTAGE6Q86UF2 777 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 CTAGE4Q8IX94 777 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 KIAA0753Q2KHM9 967 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 C8orf76Q96K31 380 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 CNNM3Q8NE01 707 aa13.09□□□□□ -0.31
ITM2B-202ENST00000378565 ATP11AP98196 1134 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 SLU7O95391 586 aaKnown RBP13.08□□□□□ -0.32
ITM2B-202ENST00000378565 LRSAM1Q6UWE0 723 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.32
ITM2B-202ENST00000378565 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
ITM2B-202ENST00000378565 ZBTB16Q05516 673 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 STAC3Q96MF2 364 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 FYCO1Q9BQS8 1478 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
ITM2B-202ENST00000378565 SKILP12757 684 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 KIF21BO75037 1637 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 CCDC196A0A1B0GTZ2 297 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 RAB34Q9BZG1 259 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 SEC63Q9UGP8 760 aaKnown RBP13.07□□□□□ -0.32
ITM2B-202ENST00000378565 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
ITM2B-202ENST00000378565 TUBBP07437 444 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 CETN1Q12798 172 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 PPP2R1AP30153 589 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 FSIP1Q8NA03 581 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 SAMD15Q9P1V8 674 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 ZKSCAN5Q9Y2L8 839 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 CCDC129Q6ZRS4 1044 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 CPLX4Q7Z7G2 160 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 IFT74Q96LB3 600 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 TACC1O75410 805 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 POTEDQ86YR6 584 aa13.07□□□□□ -0.32
ITM2B-202ENST00000378565 DHX29Q7Z478 1369 aaKnown RBP13.07□□□□□ -0.32
ITM2B-202ENST00000378565 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 CTCFLQ8NI51 663 aaPredicted RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 ZNF428Q96B54 188 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 SIL1Q9H173 461 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 CLNS1AP54105 237 aaKnown RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 BAG4O95429 457 aaKnown RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 ARID4AP29374 1257 aaPredicted RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 LIMCH1Q9UPQ0 1083 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 FKBP4Q02790 459 aaKnown RBP eCLIP13.06□□□□□ -0.32
ITM2B-202ENST00000378565 PSME1Q06323 249 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 FGD6Q6ZV73 1430 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 ZEB2O60315 1214 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 KRBA2Q6ZNG9 492 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 HDXQ7Z353 690 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 CPLX3Q8WVH0 158 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 FERMT1Q9BQL6 677 aa13.06□□□□□ -0.32
ITM2B-202ENST00000378565 SUDS3Q9H7L9 328 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms