RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 ZNF518AQ6AHZ1 1483 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 NPC1L1Q9UHC9 1359 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 PDE1AP54750 535 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 CAMK4Q16566 473 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 SMC5Q8IY18 1101 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 TMOD3Q9NYL9 352 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 VAMP4O75379 141 aa13.24□□□□□ -0.29
RPGR-203ENST00000378505 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
RPGR-203ENST00000378505 STX6O43752 255 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 SNX21Q969T3 373 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 ANO10Q9NW15 660 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 COL17A1Q9UMD9 1497 aaPredicted RBP13.23□□□□□ -0.29
RPGR-203ENST00000378505 TSHZ3Q63HK5 1081 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 ANO8Q9HCE9 1232 aaPredicted RBP13.23□□□□□ -0.29
RPGR-203ENST00000378505 TNNQ9UQP3 1299 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 TNRQ92752 1358 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 ABCF2Q9UG63 623 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 SOGA3Q5TF21 947 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 IFNL2Q8IZJ0 200 aa13.23□□□□□ -0.29
RPGR-203ENST00000378505 EIF4A2Q14240 407 aaKnown RBP13.22□□□□□ -0.29
RPGR-203ENST00000378505 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
RPGR-203ENST00000378505 ANAPC15P60006 121 aa13.22□□□□□ -0.29
RPGR-203ENST00000378505 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
RPGR-203ENST00000378505 TMX3Q96JJ7 454 aa13.22□□□□□ -0.29
RPGR-203ENST00000378505 DDX19AQ9NUU7 478 aaKnown RBP13.22□□□□□ -0.29
RPGR-203ENST00000378505 UHRF1BP1LA0JNW5 1464 aa13.22□□□□□ -0.29
RPGR-203ENST00000378505 CCDC196A0A1B0GTZ2 297 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 CTAGE5O15320 804 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 DCTPP1Q9H773 170 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 GDPD2Q9HCC8 539 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 NAPBQ9H115 298 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 CEP131Q9UPN4 1083 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 KRT18P05783 430 aaKnown RBP13.21□□□□□ -0.29
RPGR-203ENST00000378505 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
RPGR-203ENST00000378505 ATP8B2P98198 1209 aa13.21□□□□□ -0.29
RPGR-203ENST00000378505 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
RPGR-203ENST00000378505 ANXA1P04083 346 aa13.21□□□□□ -0.3
RPGR-203ENST00000378505 HMG20BQ9P0W2 317 aa13.21□□□□□ -0.3
RPGR-203ENST00000378505 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 UBE3BQ7Z3V4 1068 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 LARP6Q9BRS8 491 aaKnown RBP13.2□□□□□ -0.3
RPGR-203ENST00000378505 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 ZNF213O14771 459 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
RPGR-203ENST00000378505 GJB2P29033 226 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 MAP3K12Q12852 859 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 ADGRL2O95490 1459 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 TEX14Q8IWB6 1497 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 KIF2AO00139 706 aaPredicted RBP13.2□□□□□ -0.3
RPGR-203ENST00000378505 ESYT1Q9BSJ8 1104 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 LUC7LQ9NQ29 371 aaKnown RBP13.2□□□□□ -0.3
RPGR-203ENST00000378505 USP25Q9UHP3 1055 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 SFPQP23246 707 aaKnown RBP eCLIP13.2□□□□□ -0.3
RPGR-203ENST00000378505 ATP2B2Q01814 1243 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
RPGR-203ENST00000378505 ANKRD24Q8TF21 1146 aa13.19□□□□□ -0.3
RPGR-203ENST00000378505 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
RPGR-203ENST00000378505 UBE2HP62256 183 aa13.19□□□□□ -0.3
RPGR-203ENST00000378505 ZNF652Q9Y2D9 606 aa13.19□□□□□ -0.3
RPGR-203ENST00000378505 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
RPGR-203ENST00000378505 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
RPGR-203ENST00000378505 ALDH1L1O75891 902 aa13.19□□□□□ -0.3
RPGR-203ENST00000378505 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
RPGR-203ENST00000378505 PHACTR3Q96KR7 559 aa13.19□□□□□ -0.3
RPGR-203ENST00000378505 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
RPGR-203ENST00000378505 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
RPGR-203ENST00000378505 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
RPGR-203ENST00000378505 RIMS2Q9UQ26 1411 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 MCM5P33992 734 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
RPGR-203ENST00000378505 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 GOLIM4O00461 696 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 GUCY1B3Q02153 619 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 CKAP2LQ8IYA6 745 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 NEK1Q96PY6 1258 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
RPGR-203ENST00000378505 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 ATP5J2-PTCD1G3V325 749 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 CHPF2Q9P2E5 772 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 RNF123Q5XPI4 1314 aa13.18□□□□□ -0.3
RPGR-203ENST00000378505 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
RPGR-203ENST00000378505 INSRP06213 1382 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 BMP2KQ9NSY1 1161 aaPredicted RBP13.17□□□□□ -0.3
RPGR-203ENST00000378505 NPATQ14207 1427 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 CAVIN4Q5BKX8 364 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
RPGR-203ENST00000378505 DEF6Q9H4E7 631 aa13.17□□□□□ -0.3
RPGR-203ENST00000378505 CCT2P78371 535 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms