RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 KIF1BPQ96EK5 621 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
RNF38-206ENST00000377885 PALD1Q9ULE6 856 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 PPP6R1Q9UPN7 881 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 KIF20AO95235 890 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
RNF38-206ENST00000377885 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
RNF38-206ENST00000377885 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
RNF38-206ENST00000377885 HSP90B1P14625 803 aaKnown RBP11.89□□□□□ -0.51
RNF38-206ENST00000377885 AOX1Q06278 1338 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 CPSF1Q10570 1443 aaKnown RBP11.89□□□□□ -0.51
RNF38-206ENST00000377885 ZC3H13Q5T200 1668 aaKnown RBP11.89□□□□□ -0.51
RNF38-206ENST00000377885 SYT1P21579 422 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 ANKRD1Q15327 319 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 FEZ1Q99689 392 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
RNF38-206ENST00000377885 HIP1O00291 1037 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 BCL2L12Q9HB09 334 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 CCDC66A2RUB6 948 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 HSPA4P34932 840 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 AK2P54819 239 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 TPM4P67936 248 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 CAMK4Q16566 473 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 TSC1Q92574 1164 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
RNF38-206ENST00000377885 PAXBP1Q9Y5B6 917 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 AK9Q5TCS8 1911 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 TNNT1P13805 278 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 EIF4A2Q14240 407 aaKnown RBP11.88□□□□□ -0.51
RNF38-206ENST00000377885 ATP7BP35670 1465 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
RNF38-206ENST00000377885 GLRX3O76003 335 aaKnown RBP11.88□□□□□ -0.51
RNF38-206ENST00000377885 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
RNF38-206ENST00000377885 AATKQ6ZMQ8 1374 aa11.88□□□□□ -0.51
RNF38-206ENST00000377885 PPLO60437 1756 aa11.87□□□□□ -0.51
RNF38-206ENST00000377885 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
RNF38-206ENST00000377885 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
RNF38-206ENST00000377885 C16orf45Q96MC5 204 aaPredicted RBP11.87□□□□□ -0.51
RNF38-206ENST00000377885 EIF2S2P20042 333 aaKnown RBP11.87□□□□□ -0.51
RNF38-206ENST00000377885 TMEM87AQ8NBN3 555 aa11.87□□□□□ -0.51
RNF38-206ENST00000377885 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
RNF38-206ENST00000377885 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
RNF38-206ENST00000377885 TTC21BQ7Z4L5 1316 aa11.87□□□□□ -0.51
RNF38-206ENST00000377885 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
RNF38-206ENST00000377885 PRPF40BQ6NWY9 871 aaKnown RBP11.87□□□□□ -0.51
RNF38-206ENST00000377885 HDGFL1Q5TGJ6 251 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 G2E3Q7L622 706 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 ERC1Q8IUD2 1116 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 C9orf78Q9NZ63 289 aaPredicted RBP11.86□□□□□ -0.51
RNF38-206ENST00000377885 NAP1L2Q9ULW6 460 aaPredicted RBP11.86□□□□□ -0.51
RNF38-206ENST00000377885 IFT172Q9UG01 1749 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 ABCC3O15438 1527 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 NEO1Q92859 1461 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
RNF38-206ENST00000377885 OGFRQ9NZT2 677 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
RNF38-206ENST00000377885 RAD50Q92878 1312 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 SMTNL1A8MU46 457 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 CCDC73Q6ZRK6 1079 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 PTGS1P23219 599 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 CCDC186Q7Z3E2 898 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 FERMT3Q86UX7 667 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 CLIP2Q9UDT6 1046 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 STAP2Q9UGK3 403 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 SOS1Q07889 1333 aaPredicted RBP11.85□□□□□ -0.51
RNF38-206ENST00000377885 ABCA9Q8IUA7 1624 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 CAVIN2O95810 425 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 GTF2F1P35269 517 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF38-206ENST00000377885 TYRO3Q06418 890 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
RNF38-206ENST00000377885 NEMFO60524 1076 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 BLOC1S2Q6QNY1 142 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 SGSM2O43147 1006 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 NAT10Q9H0A0 1025 aaKnown RBP11.84□□□□□ -0.51
RNF38-206ENST00000377885 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 VPS53Q5VIR6 699 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
RNF38-206ENST00000377885 KIAA1524Q8TCG1 905 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
RNF38-206ENST00000377885 G3BP1Q13283 466 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF38-206ENST00000377885 CAMSAP1Q5T5Y3 1602 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 GNAT3A8MTJ3 354 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
RNF38-206ENST00000377885 PTPN14Q15678 1187 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 ANO6Q4KMQ2 910 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 PRDM4Q9UKN5 801 aa11.83□□□□□ -0.52
RNF38-206ENST00000377885 U2AF2P26368 475 aaKnown RBP eCLIP11.83□□□□□ -0.523e-6■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms