RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 PPP4R3AQ6IN85 833 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 PPIP5K1Q6PFW1 1433 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 IFIT5Q13325 482 aaKnown RBP12.75□□□□□ -0.37
HIF3A-205ENST00000377670 UBAC1Q9BSL1 405 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 RTCBQ9Y3I0 505 aaKnown RBP12.75□□□□□ -0.37
HIF3A-205ENST00000377670 UQCRHLA0A096LP55 91 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 UQCRHP07919 91 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 MKNK2Q9HBH9 465 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 KDM6BO15054 1643 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 AACSQ86V21 672 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 TRIM5Q9C035 493 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 GRPEL1Q9HAV7 217 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 SLC5A1P13866 664 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
HIF3A-205ENST00000377670 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
HIF3A-205ENST00000377670 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 H0YHG0 523 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 CT47B1P0C2W7 299 aaPredicted RBP12.74□□□□□ -0.37
HIF3A-205ENST00000377670 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 RRP9O43818 475 aaKnown RBP12.74□□□□□ -0.37
HIF3A-205ENST00000377670 KCNA6P17658 529 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
HIF3A-205ENST00000377670 HMGN5P82970 282 aaKnown RBP12.74□□□□□ -0.37
HIF3A-205ENST00000377670 TRIM22Q8IYM9 498 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 PDILTQ8N807 584 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 MYD88Q99836 296 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 USP21Q9UK80 565 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 DNAI2Q9GZS0 605 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
HIF3A-205ENST00000377670 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
HIF3A-205ENST00000377670 IGHDP01880 384 aa12.73□□□□□ -0.37
HIF3A-205ENST00000377670 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
HIF3A-205ENST00000377670 SYCP1Q15431 976 aa12.73□□□□□ -0.37
HIF3A-205ENST00000377670 TSHZ3Q63HK5 1081 aa12.73□□□□□ -0.37
HIF3A-205ENST00000377670 PDCL3Q9H2J4 239 aa12.73□□□□□ -0.37
HIF3A-205ENST00000377670 CWC27Q6UX04 472 aaKnown RBP12.73□□□□□ -0.37
HIF3A-205ENST00000377670 MPNDQ8N594 471 aa12.73□□□□□ -0.37
HIF3A-205ENST00000377670 APBA3O96018 575 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 STK3Q13188 491 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 CCDC96Q2M329 555 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 PER1O15534 1290 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-205ENST00000377670 NAP1L1P55209 391 aaKnown RBP12.72□□□□□ -0.37
HIF3A-205ENST00000377670 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 LETM1O95202 739 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-205ENST00000377670 LDHCP07864 332 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 ZBTB3Q9H5J0 574 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 ZNF408Q9H9D4 720 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 MBD3O95983 291 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 ANKRD36BQ8N2N9 1353 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 TTLL5Q6EMB2 1281 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 NAT10Q9H0A0 1025 aaKnown RBP12.72□□□□□ -0.37
HIF3A-205ENST00000377670 KAT6BQ8WYB5 2073 aa12.72□□□□□ -0.37
HIF3A-205ENST00000377670 LRRFIP2Q9Y608 721 aaKnown RBP12.71□□□□□ -0.37
HIF3A-205ENST00000377670 HLA-DOAP06340 250 aa12.71□□□□□ -0.37
HIF3A-205ENST00000377670 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
HIF3A-205ENST00000377670 EIF4A2Q14240 407 aaKnown RBP12.71□□□□□ -0.37
HIF3A-205ENST00000377670 RDXP35241 583 aaKnown RBP12.71□□□□□ -0.37
HIF3A-205ENST00000377670 CUL5Q93034 780 aa12.71□□□□□ -0.37
HIF3A-205ENST00000377670 A0A1W2PP64 1363 aa12.71□□□□□ -0.38
HIF3A-205ENST00000377670 CDR1P51861 262 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 ASXL1Q8IXJ9 1541 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 ZNF444Q8N0Y2 327 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-205ENST00000377670 C8orf58Q8NAV2 365 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 SEC63Q9UGP8 760 aaKnown RBP12.7□□□□□ -0.38
HIF3A-205ENST00000377670 SMC2O95347 1197 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 CAGE1Q8TC20 777 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 DRC1Q96MC2 740 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 IL2RBP14784 551 aa12.7□□□□□ -0.38
HIF3A-205ENST00000377670 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-205ENST00000377670 ECM2O94769 699 aaPredicted RBP12.69□□□□□ -0.38
HIF3A-205ENST00000377670 TSPYL6Q8N831 410 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 FLIIQ13045 1269 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 SKIDA1Q1XH10 827 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 ESPNB1AK53 854 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 NEBLO76041 1014 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
HIF3A-205ENST00000377670 ZNF772Q68DY9 489 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 CTNNA3Q9UI47 895 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 ATP7AQ04656 1500 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 PLEKHH1Q9ULM0 1364 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 CEBPZQ03701 1054 aaKnown RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 DDX17Q92841 729 aaKnown RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
HIF3A-205ENST00000377670 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
HIF3A-205ENST00000377670 NYXQ9GZU5 481 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms