RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 DIP2AQ14689 1571 aa21.99■■□□□ 1.11
SF1-203ENST00000377387 LMOD2Q6P5Q4 547 aa21.99■■□□□ 1.11
SF1-203ENST00000377387 ZSCAN30Q86W11 494 aa21.98■■□□□ 1.11
SF1-203ENST00000377387 BRD1O95696 1058 aa21.98■■□□□ 1.11
SF1-203ENST00000377387 MCM2P49736 904 aa21.98■■□□□ 1.11
SF1-203ENST00000377387 CWC27Q6UX04 472 aaKnown RBP21.98■■□□□ 1.11
SF1-203ENST00000377387 SSH3Q8TE77 659 aa21.98■■□□□ 1.11
SF1-203ENST00000377387 NBPF6Q5VWK0 638 aa21.97■■□□□ 1.11
SF1-203ENST00000377387 LRRC59Q96AG4 307 aaKnown RBP21.97■■□□□ 1.11
SF1-203ENST00000377387 NBPF4Q96M43 638 aa21.97■■□□□ 1.11
SF1-203ENST00000377387 SPG7Q9UQ90 795 aa21.97■■□□□ 1.11
SF1-203ENST00000377387 FMN2Q9NZ56 1722 aa21.97■■□□□ 1.11
SF1-203ENST00000377387 CPA1P15085 419 aa21.97■■□□□ 1.11
SF1-203ENST00000377387 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
SF1-203ENST00000377387 CUL4AQ13619 759 aa21.96■■□□□ 1.11
SF1-203ENST00000377387 GADD45BO75293 160 aaPredicted RBP21.96■■□□□ 1.11
SF1-203ENST00000377387 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
SF1-203ENST00000377387 LRSAM1Q6UWE0 723 aa21.95■■□□□ 1.1
SF1-203ENST00000377387 ANAPC15P60006 121 aa21.94■■□□□ 1.1
SF1-203ENST00000377387 ESCO1Q5FWF5 840 aa21.94■■□□□ 1.1
SF1-203ENST00000377387 PIK3C2AO00443 1686 aa21.94■■□□□ 1.1
SF1-203ENST00000377387 EIF4A1P60842 406 aaKnown RBP21.94■■□□□ 1.1
SF1-203ENST00000377387 PI4K2BQ8TCG2 481 aa21.94■■□□□ 1.1
SF1-203ENST00000377387 DNAAF4Q8WXU2 420 aa21.94■■□□□ 1.1
SF1-203ENST00000377387 TEFQ10587 303 aa21.93■■□□□ 1.1
SF1-203ENST00000377387 MPNDQ8N594 471 aa21.93■■□□□ 1.1
SF1-203ENST00000377387 RASEFQ8IZ41 740 aa21.93■■□□□ 1.1
SF1-203ENST00000377387 HSPA4P34932 840 aa21.92■■□□□ 1.1
SF1-203ENST00000377387 KIAA1211Q6ZU35 1233 aa21.92■■□□□ 1.1
SF1-203ENST00000377387 KIF1BPQ96EK5 621 aa21.92■■□□□ 1.1
SF1-203ENST00000377387 BTBD11A6QL63 1104 aa21.92■■□□□ 1.1
SF1-203ENST00000377387 PA2G4Q9UQ80 394 aaKnown RBP21.92■■□□□ 1.1
SF1-203ENST00000377387 ZNF530Q6P9A1 599 aaPredicted RBP21.91■■□□□ 1.1
SF1-203ENST00000377387 PHF8Q9UPP1 1060 aa21.91■■□□□ 1.1
SF1-203ENST00000377387 RAB11FIP3O75154 756 aa21.91■■□□□ 1.1
SF1-203ENST00000377387 BEND3Q5T5X7 828 aa21.91■■□□□ 1.1
SF1-203ENST00000377387 USP48Q86UV5 1035 aa21.91■■□□□ 1.1
SF1-203ENST00000377387 SNX14Q9Y5W7 946 aa21.91■■□□□ 1.1
SF1-203ENST00000377387 ARHGAP23Q9P227 1491 aa21.91■■□□□ 1.1
SF1-203ENST00000377387 INTS4Q96HW7 963 aaKnown RBP21.9■■□□□ 1.1
SF1-203ENST00000377387 SGSM2O43147 1006 aa21.9■■□□□ 1.1
SF1-203ENST00000377387 MBD3O95983 291 aa21.9■■□□□ 1.1
SF1-203ENST00000377387 POLA2Q14181 598 aa21.9■■□□□ 1.1
SF1-203ENST00000377387 CNTROBQ8N137 903 aa21.9■■□□□ 1.1
SF1-203ENST00000377387 XRN1Q8IZH2 1706 aaKnown RBP21.9■■□□□ 1.1
SF1-203ENST00000377387 PRAMEF22A3QJZ6 481 aa21.9■■□□□ 1.1
SF1-203ENST00000377387 PSME1Q06323 249 aa21.9■■□□□ 1.1
SF1-203ENST00000377387 C9orf78Q9NZ63 289 aaPredicted RBP21.89■■□□□ 1.09
SF1-203ENST00000377387 SLIT1O75093 1534 aa21.89■■□□□ 1.09
SF1-203ENST00000377387 AK2P54819 239 aa21.89■■□□□ 1.09
SF1-203ENST00000377387 FER1L4A9Z1Z3 1794 aa21.89■■□□□ 1.09
SF1-203ENST00000377387 ORAI2Q96SN7 254 aa21.88■■□□□ 1.09
SF1-203ENST00000377387 FAM208AQ9UK61 1670 aaKnown RBP21.88■■□□□ 1.09
SF1-203ENST00000377387 PROSER3Q2NL68 480 aa21.88■■□□□ 1.09
SF1-203ENST00000377387 CWF19L2Q2TBE0 894 aaKnown RBP21.88■■□□□ 1.09
SF1-203ENST00000377387 AIMP1Q12904 312 aaKnown RBP21.87■■□□□ 1.09
SF1-203ENST00000377387 HSP90AA2PQ14568 343 aaPredicted RBP21.87■■□□□ 1.09
SF1-203ENST00000377387 IP6K1Q92551 441 aa21.87■■□□□ 1.09
SF1-203ENST00000377387 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
SF1-203ENST00000377387 DIAPH3Q9NSV4 1193 aa21.87■■□□□ 1.09
SF1-203ENST00000377387 CNPY2Q9Y2B0 182 aa21.87■■□□□ 1.09
SF1-203ENST00000377387 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
SF1-203ENST00000377387 LSG1Q9H089 658 aaKnown RBP21.86■■□□□ 1.09
SF1-203ENST00000377387 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
SF1-203ENST00000377387 RAD50Q92878 1312 aa21.86■■□□□ 1.09
SF1-203ENST00000377387 WDR33Q9C0J8 1336 aaKnown RBP21.86■■□□□ 1.09
SF1-203ENST00000377387 TSPY26PQ9H489 355 aa21.86■■□□□ 1.09
SF1-203ENST00000377387 R3HCC1Q9Y3T6 440 aaKnown RBP21.86■■□□□ 1.09
SF1-203ENST00000377387 PDLIM2Q96JY6 352 aa21.85■■□□□ 1.09
SF1-203ENST00000377387 TCHHQ07283 1943 aa21.85■■□□□ 1.09
SF1-203ENST00000377387 AOX1Q06278 1338 aa21.85■■□□□ 1.09
SF1-203ENST00000377387 PTMAP06454 111 aaKnown RBP21.85■■□□□ 1.09
SF1-203ENST00000377387 PTH1RQ03431 593 aa21.85■■□□□ 1.09
SF1-203ENST00000377387 RUFY3Q7L099 469 aa21.85■■□□□ 1.09
SF1-203ENST00000377387 BABAM1Q9NWV8 329 aa21.85■■□□□ 1.09
SF1-203ENST00000377387 LARGE1O95461 756 aa21.84■■□□□ 1.09
SF1-203ENST00000377387 PRPF40BQ6NWY9 871 aaKnown RBP21.84■■□□□ 1.09
SF1-203ENST00000377387 CLASRPQ8N2M8 674 aaKnown RBP21.84■■□□□ 1.09
SF1-203ENST00000377387 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.84■■□□□ 1.09
SF1-203ENST00000377387 FIBPO43427 364 aa21.83■■□□□ 1.09
SF1-203ENST00000377387 CCDC83Q8IWF9 413 aa21.83■■□□□ 1.09
SF1-203ENST00000377387 ADCK5Q3MIX3 580 aa21.83■■□□□ 1.09
SF1-203ENST00000377387 IFIT2P09913 472 aaKnown RBP21.83■■□□□ 1.08
SF1-203ENST00000377387 JAKMIP1Q96N16 626 aaKnown RBP21.83■■□□□ 1.08
SF1-203ENST00000377387 NOL7Q9UMY1 257 aaKnown RBP21.83■■□□□ 1.08
SF1-203ENST00000377387 SMC3Q9UQE7 1217 aa21.83■■□□□ 1.08
SF1-203ENST00000377387 ADCY9O60503 1353 aa21.82■■□□□ 1.08
SF1-203ENST00000377387 ANKLE2Q86XL3 938 aa21.82■■□□□ 1.08
SF1-203ENST00000377387 SIL1Q9H173 461 aa21.82■■□□□ 1.08
SF1-203ENST00000377387 OFD1O75665 1012 aa21.82■■□□□ 1.08
SF1-203ENST00000377387 SYT1P21579 422 aa21.82■■□□□ 1.08
SF1-203ENST00000377387 SYAP1Q96A49 352 aaPredicted RBP21.82■■□□□ 1.08
SF1-203ENST00000377387 LIMCH1Q9UPQ0 1083 aa21.82■■□□□ 1.08
SF1-203ENST00000377387 CEMIPQ8WUJ3 1361 aa21.81■■□□□ 1.08
SF1-203ENST00000377387 C1orf141Q5JVX7 400 aa21.81■■□□□ 1.08
SF1-203ENST00000377387 AACSQ86V21 672 aa21.81■■□□□ 1.08
SF1-203ENST00000377387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.81■■□□□ 1.08
SF1-203ENST00000377387 GLRX3O76003 335 aaKnown RBP21.81■■□□□ 1.08
SF1-203ENST00000377387 KCNJ4P48050 445 aa21.81■■□□□ 1.08
SF1-203ENST00000377387 TTC14Q96N46 770 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms