RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 KIF16BQ96L93 1317 aa14.03□□□□□ -0.16
UBD-203ENST00000377050 IPO8O15397 1037 aaKnown RBP14.02□□□□□ -0.17
UBD-203ENST00000377050 CALD1Q05682 793 aaKnown RBP14.02□□□□□ -0.17
UBD-203ENST00000377050 NEUROD2Q15784 382 aa14.02□□□□□ -0.17
UBD-203ENST00000377050 FLAD1Q8NFF5 587 aa14.02□□□□□ -0.17
UBD-203ENST00000377050 RBM46Q8TBY0 533 aaKnown RBP14.02□□□□□ -0.17
UBD-203ENST00000377050 UPF2Q9HAU5 1272 aaKnown RBP14.02□□□□□ -0.17
UBD-203ENST00000377050 CCNL1Q9UK58 526 aaPredicted RBP14.02□□□□□ -0.17
UBD-203ENST00000377050 WWC3Q9ULE0 1092 aa14.02□□□□□ -0.17
UBD-203ENST00000377050 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
UBD-203ENST00000377050 KCNQ4P56696 695 aa14.01□□□□□ -0.17
UBD-203ENST00000377050 GSE1Q14687 1217 aa14.01□□□□□ -0.17
UBD-203ENST00000377050 CABP1Q9NZU7 370 aa14.01□□□□□ -0.17
UBD-203ENST00000377050 ERBB3P21860 1342 aa14□□□□□ -0.17
UBD-203ENST00000377050 ATF7IPQ6VMQ6 1270 aa14□□□□□ -0.17
UBD-203ENST00000377050 TBC1D32Q96NH3 1257 aa14□□□□□ -0.17
UBD-203ENST00000377050 CICQ96RK0 1608 aaPredicted RBP14□□□□□ -0.17
UBD-203ENST00000377050 EDC4Q6P2E9 1401 aaKnown RBP13.99□□□□□ -0.17
UBD-203ENST00000377050 EXOSC9Q06265 439 aaKnown RBP13.99□□□□□ -0.17
UBD-203ENST00000377050 FSTL1Q12841 308 aa13.99□□□□□ -0.17
UBD-203ENST00000377050 SMC5Q8IY18 1101 aa13.99□□□□□ -0.17
UBD-203ENST00000377050 FTSJ3Q8IY81 847 aaKnown RBP13.99□□□□□ -0.17
UBD-203ENST00000377050 DDX54Q8TDD1 881 aaKnown RBP13.99□□□□□ -0.17
UBD-203ENST00000377050 ARHGAP45Q92619 1136 aa13.99□□□□□ -0.17
UBD-203ENST00000377050 NFAT5O94916 1531 aa13.99□□□□□ -0.17
UBD-203ENST00000377050 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
UBD-203ENST00000377050 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
UBD-203ENST00000377050 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
UBD-203ENST00000377050 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
UBD-203ENST00000377050 SMC4Q9NTJ3 1288 aa13.98□□□□□ -0.17
UBD-203ENST00000377050 PCDH10Q9P2E7 1040 aa13.98□□□□□ -0.17
UBD-203ENST00000377050 TTC21BQ7Z4L5 1316 aa13.97□□□□□ -0.17
UBD-203ENST00000377050 SSH1Q8WYL5 1049 aa13.97□□□□□ -0.17
UBD-203ENST00000377050 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
UBD-203ENST00000377050 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
UBD-203ENST00000377050 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 C5P01031 1676 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 U2SURPO15042 1029 aaKnown RBP13.96□□□□□ -0.17
UBD-203ENST00000377050 TRIM27P14373 513 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
UBD-203ENST00000377050 RIPK4P57078 832 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 HTRA3P83110 453 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 NMRK2Q9NPI5 230 aa13.96□□□□□ -0.17
UBD-203ENST00000377050 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
UBD-203ENST00000377050 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
UBD-203ENST00000377050 LTN1O94822 1766 aa13.95□□□□□ -0.18
UBD-203ENST00000377050 LMOD3Q0VAK6 560 aa13.94□□□□□ -0.18
UBD-203ENST00000377050 NFE2L2Q16236 605 aa13.94□□□□□ -0.18
UBD-203ENST00000377050 ANKRD24Q8TF21 1146 aa13.94□□□□□ -0.18
UBD-203ENST00000377050 TNNQ9UQP3 1299 aa13.94□□□□□ -0.18
UBD-203ENST00000377050 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
UBD-203ENST00000377050 SEC24BO95487 1268 aa13.93□□□□□ -0.18
UBD-203ENST00000377050 HSPA1AP0DMV8 641 aaKnown RBP13.93□□□□□ -0.18
UBD-203ENST00000377050 HSPA1BP0DMV9 641 aaKnown RBP13.93□□□□□ -0.18
UBD-203ENST00000377050 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
UBD-203ENST00000377050 IFT57Q9NWB7 429 aa13.93□□□□□ -0.18
UBD-203ENST00000377050 POLKQ9UBT6 870 aa13.93□□□□□ -0.18
UBD-203ENST00000377050 USP54Q70EL1 1684 aa13.92□□□□□ -0.18
UBD-203ENST00000377050 FAM208AQ9UK61 1670 aaKnown RBP13.92□□□□□ -0.18
UBD-203ENST00000377050 ZNF853P0CG23 659 aa13.92□□□□□ -0.18
UBD-203ENST00000377050 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
UBD-203ENST00000377050 GNAI1P63096 354 aa13.92□□□□□ -0.18
UBD-203ENST00000377050 TSR2Q969E8 191 aaKnown RBP13.92□□□□□ -0.18
UBD-203ENST00000377050 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
UBD-203ENST00000377050 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
UBD-203ENST00000377050 IL13P35225 146 aa13.91□□□□□ -0.18
UBD-203ENST00000377050 GCC1Q96CN9 775 aa13.91□□□□□ -0.18
UBD-203ENST00000377050 BCL2L13Q9BXK5 485 aa13.91□□□□□ -0.18
UBD-203ENST00000377050 NUCB1Q02818 461 aa13.9□□□□□ -0.18
UBD-203ENST00000377050 TMEM57Q8N5G2 664 aa13.9□□□□□ -0.18
UBD-203ENST00000377050 AK7Q96M32 723 aa13.9□□□□□ -0.18
UBD-203ENST00000377050 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
UBD-203ENST00000377050 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
UBD-203ENST00000377050 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
UBD-203ENST00000377050 ITPRIPQ8IWB1 547 aa13.89□□□□□ -0.19
UBD-203ENST00000377050 SMC1BQ8NDV3 1235 aa13.89□□□□□ -0.19
UBD-203ENST00000377050 BCS1LQ9Y276 419 aa13.89□□□□□ -0.19
UBD-203ENST00000377050 VAMP4O75379 141 aa13.88□□□□□ -0.19
UBD-203ENST00000377050 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
UBD-203ENST00000377050 MRPL50Q8N5N7 158 aaKnown RBP13.88□□□□□ -0.19
UBD-203ENST00000377050 C10orf71Q711Q0 1435 aa13.88□□□□□ -0.19
UBD-203ENST00000377050 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
UBD-203ENST00000377050 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
UBD-203ENST00000377050 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
UBD-203ENST00000377050 SNX21Q969T3 373 aa13.87□□□□□ -0.19
UBD-203ENST00000377050 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
UBD-203ENST00000377050 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
UBD-203ENST00000377050 ABCC4O15439 1325 aa13.87□□□□□ -0.19
UBD-203ENST00000377050 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
UBD-203ENST00000377050 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
UBD-203ENST00000377050 ZBTB7BO15156 539 aaPredicted RBP13.86□□□□□ -0.19
UBD-203ENST00000377050 PHF14O94880 888 aa13.86□□□□□ -0.19
UBD-203ENST00000377050 BMP2KLQ5H9B9 411 aa13.86□□□□□ -0.19
UBD-203ENST00000377050 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
UBD-203ENST00000377050 API5Q9BZZ5 524 aaKnown RBP13.86□□□□□ -0.19
UBD-203ENST00000377050 PKD1L3Q7Z443 1732 aa13.86□□□□□ -0.19
UBD-203ENST00000377050 UBR3Q6ZT12 1888 aa13.85□□□□□ -0.19
UBD-203ENST00000377050 PCNTO95613 3336 aa13.85□□□□□ -0.19
UBD-203ENST00000377050 TGFB2P61812 414 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms