RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
ACTN1-202ENST00000376839 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
ACTN1-202ENST00000376839 TPM2P07951 284 aa16.04■□□□□ 0.16
ACTN1-202ENST00000376839 HSPA4P34932 840 aa16.04■□□□□ 0.16
ACTN1-202ENST00000376839 GADD45BO75293 160 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-202ENST00000376839 PI4K2BQ8TCG2 481 aa16.03■□□□□ 0.16
ACTN1-202ENST00000376839 EID1Q9Y6B2 187 aa16.03■□□□□ 0.16
ACTN1-202ENST00000376839 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
ACTN1-202ENST00000376839 POLA2Q14181 598 aa16.02■□□□□ 0.16
ACTN1-202ENST00000376839 PLPPR3Q6T4P5 718 aa16.02■□□□□ 0.16
ACTN1-202ENST00000376839 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
ACTN1-202ENST00000376839 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
ACTN1-202ENST00000376839 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-202ENST00000376839 EIF2S2P20042 333 aaKnown RBP16.01■□□□□ 0.15
ACTN1-202ENST00000376839 XPCQ01831 940 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-202ENST00000376839 SRGAP3O43295 1099 aa16.01■□□□□ 0.15
ACTN1-202ENST00000376839 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-202ENST00000376839 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
ACTN1-202ENST00000376839 TBX22Q9Y458 520 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 RAD50Q92878 1312 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 RPAP1Q9BWH6 1393 aaPredicted RBP16■□□□□ 0.15
ACTN1-202ENST00000376839 SGSM2O43147 1006 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 ZNF500O60304 480 aaPredicted RBP16■□□□□ 0.15
ACTN1-202ENST00000376839 RAB11FIP3O75154 756 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 USP48Q86UV5 1035 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 KIF13AQ9H1H9 1805 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 ABTB2Q8N961 1025 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 TSPY26PQ9H489 355 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 ZKSCAN5Q9Y2L8 839 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 SNX14Q9Y5W7 946 aa16■□□□□ 0.15
ACTN1-202ENST00000376839 RASEFQ8IZ41 740 aa15.99■□□□□ 0.15
ACTN1-202ENST00000376839 WDR33Q9C0J8 1336 aaKnown RBP15.99■□□□□ 0.15
ACTN1-202ENST00000376839 LSG1Q9H089 658 aaKnown RBP15.99■□□□□ 0.15
ACTN1-202ENST00000376839 CHPF2Q9P2E5 772 aa15.99■□□□□ 0.15
ACTN1-202ENST00000376839 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 ANXA1P04083 346 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 R3HCC1Q9Y3T6 440 aaKnown RBP15.98■□□□□ 0.15
ACTN1-202ENST00000376839 TCHHQ07283 1943 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 KCNQ3O43525 872 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 TTC14Q96N46 770 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
ACTN1-202ENST00000376839 PI4KAP2A4QPH2 592 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 EPB41L2O43491 1005 aaKnown RBP15.97■□□□□ 0.15
ACTN1-202ENST00000376839 PI4KAP1Q8N8J0 262 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 ARHGAP23Q9P227 1491 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 AK2P54819 239 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
ACTN1-202ENST00000376839 BEND3Q5T5X7 828 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 CWC27Q6UX04 472 aaKnown RBP15.97■□□□□ 0.15
ACTN1-202ENST00000376839 C14orf37Q86TY3 774 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
ACTN1-202ENST00000376839 CPA1P15085 419 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 RUFY3Q7L099 469 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 SYAP1Q96A49 352 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-202ENST00000376839 SLIT1O75093 1534 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 DTNBO60941 627 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 TPRNQ4KMQ1 711 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 DNAAF4Q8WXU2 420 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 CCDC39Q9UFE4 941 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 CNPY2Q9Y2B0 182 aa15.96■□□□□ 0.15
ACTN1-202ENST00000376839 KCNA6P17658 529 aa15.95■□□□□ 0.14
ACTN1-202ENST00000376839 ANKARQ7Z5J8 1434 aa15.94■□□□□ 0.14
ACTN1-202ENST00000376839 LARGE1O95461 756 aa15.94■□□□□ 0.14
ACTN1-202ENST00000376839 NBPF6Q5VWK0 638 aa15.94■□□□□ 0.14
ACTN1-202ENST00000376839 NBPF4Q96M43 638 aa15.94■□□□□ 0.14
ACTN1-202ENST00000376839 ADCY9O60503 1353 aa15.93■□□□□ 0.14
ACTN1-202ENST00000376839 ZSCAN22P10073 491 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-202ENST00000376839 SYT1P21579 422 aa15.93■□□□□ 0.14
ACTN1-202ENST00000376839 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
ACTN1-202ENST00000376839 MED1Q15648 1581 aaPredicted RBP15.93■□□□□ 0.14
ACTN1-202ENST00000376839 MCM5P33992 734 aa15.93■□□□□ 0.14
ACTN1-202ENST00000376839 LIMCH1Q9UPQ0 1083 aa15.93■□□□□ 0.14
ACTN1-202ENST00000376839 PHF14O94880 888 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 TERF1P54274 439 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
ACTN1-202ENST00000376839 CRYBG1Q9Y4K1 1723 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 STX6O43752 255 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 CASTP20810 708 aaKnown RBP15.92■□□□□ 0.14
ACTN1-202ENST00000376839 PTH1RQ03431 593 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 MPNDQ8N594 471 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
ACTN1-202ENST00000376839 USP54Q70EL1 1684 aa15.92■□□□□ 0.14
ACTN1-202ENST00000376839 SETD1BQ9UPS6 1966 aaKnown RBP15.91■□□□□ 0.14
ACTN1-202ENST00000376839 PTMAP06454 111 aaKnown RBP15.91■□□□□ 0.14
ACTN1-202ENST00000376839 RBM10P98175 930 aaKnown RBP15.91■□□□□ 0.14
ACTN1-202ENST00000376839 LTN1O94822 1766 aa15.91■□□□□ 0.14
ACTN1-202ENST00000376839 ADCK5Q3MIX3 580 aa15.91■□□□□ 0.14
ACTN1-202ENST00000376839 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 GLRX3O76003 335 aaKnown RBP15.9■□□□□ 0.14
ACTN1-202ENST00000376839 HOXB7P09629 217 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 CCDC183Q5T5S1 534 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 IP6K1Q92551 441 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 DIAPH3Q9NSV4 1193 aa15.9■□□□□ 0.14
ACTN1-202ENST00000376839 PA2G4Q9UQ80 394 aaKnown RBP15.9■□□□□ 0.14
ACTN1-202ENST00000376839 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms