RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
HLA-A-202ENST00000376806 LRP6O75581 1613 aa20.94■□□□□ 0.94
HLA-A-202ENST00000376806 TOGARAM1Q9Y4F4 1720 aa20.94■□□□□ 0.94
HLA-A-202ENST00000376806 PLCH1Q4KWH8 1693 aa20.94■□□□□ 0.94
HLA-A-202ENST00000376806 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
HLA-A-202ENST00000376806 USP44Q9H0E7 712 aa20.94■□□□□ 0.94
HLA-A-202ENST00000376806 WNK3Q9BYP7 1800 aa20.94■□□□□ 0.94
HLA-A-202ENST00000376806 PI4KAP2A4QPH2 592 aa20.93■□□□□ 0.94
HLA-A-202ENST00000376806 PI4KAP1Q8N8J0 262 aa20.93■□□□□ 0.94
HLA-A-202ENST00000376806 STRN4Q9NRL3 753 aa20.93■□□□□ 0.94
HLA-A-202ENST00000376806 UBTFL1P0CB47 393 aaPredicted RBP20.92■□□□□ 0.94
HLA-A-202ENST00000376806 IL2RBP14784 551 aa20.92■□□□□ 0.94
HLA-A-202ENST00000376806 BEND3Q5T5X7 828 aa20.92■□□□□ 0.94
HLA-A-202ENST00000376806 LARP1Q6PKG0 1096 aaKnown RBP20.92■□□□□ 0.94
HLA-A-202ENST00000376806 ZCRB1Q8TBF4 217 aaKnown RBP20.92■□□□□ 0.94
HLA-A-202ENST00000376806 LRRFIP2Q9Y608 721 aaKnown RBP20.92■□□□□ 0.94
HLA-A-202ENST00000376806 SPATA31A6Q5VVP1 1343 aa20.92■□□□□ 0.94
HLA-A-202ENST00000376806 HYPKQ9NX55 129 aa20.92■□□□□ 0.94
HLA-A-202ENST00000376806 TTC5Q8N0Z6 440 aa20.91■□□□□ 0.94
HLA-A-202ENST00000376806 TBC1D32Q96NH3 1257 aa20.91■□□□□ 0.94
HLA-A-202ENST00000376806 DDX21Q9NR30 783 aaKnown RBP eCLIP20.91■□□□□ 0.94
HLA-A-202ENST00000376806 CABP4P57796 275 aa20.9■□□□□ 0.94
HLA-A-202ENST00000376806 PLEKHM2Q8IWE5 1019 aa20.9■□□□□ 0.94
HLA-A-202ENST00000376806 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
HLA-A-202ENST00000376806 TUBGCP6Q96RT7 1819 aa20.9■□□□□ 0.94
HLA-A-202ENST00000376806 EVA1CP58658 441 aa20.9■□□□□ 0.94
HLA-A-202ENST00000376806 ATP8B2P98198 1209 aa20.9■□□□□ 0.94
HLA-A-202ENST00000376806 PDIA6Q15084 440 aa20.89■□□□□ 0.93
HLA-A-202ENST00000376806 ARFGEF2Q9Y6D5 1785 aa20.89■□□□□ 0.93
HLA-A-202ENST00000376806 PNMA6EA0A0J9YXQ4 647 aa20.88■□□□□ 0.93
HLA-A-202ENST00000376806 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
HLA-A-202ENST00000376806 BTG4Q9NY30 223 aa20.88■□□□□ 0.93
HLA-A-202ENST00000376806 MAP3K2Q9Y2U5 619 aa20.88■□□□□ 0.93
HLA-A-202ENST00000376806 SMARCA5O60264 1052 aaPredicted RBP20.88■□□□□ 0.93
HLA-A-202ENST00000376806 FMNL2Q96PY5 1086 aa20.88■□□□□ 0.93
HLA-A-202ENST00000376806 AFDNP55196 1824 aaKnown RBP20.87■□□□□ 0.93
HLA-A-202ENST00000376806 APBB1O00213 710 aa20.87■□□□□ 0.93
HLA-A-202ENST00000376806 KCPQ6ZWJ8 1503 aa20.86■□□□□ 0.93
HLA-A-202ENST00000376806 SNRPA1P09661 255 aaKnown RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 MFAP1P55081 439 aaKnown RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 C8orf37Q96NL8 207 aa20.86■□□□□ 0.93
HLA-A-202ENST00000376806 ALDH1L1O75891 902 aa20.86■□□□□ 0.93
HLA-A-202ENST00000376806 DDX58O95786 925 aaKnown RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 GSPT1P15170 499 aaKnown RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 TTC22Q5TAA0 569 aa20.86■□□□□ 0.93
HLA-A-202ENST00000376806 C16orf71Q8IYS4 520 aaPredicted RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 OTUD7AQ8TE49 926 aaPredicted RBP20.86■□□□□ 0.93
HLA-A-202ENST00000376806 EXOC6BQ9Y2D4 811 aa20.86■□□□□ 0.93
HLA-A-202ENST00000376806 IBTKQ9P2D0 1353 aaPredicted RBP20.85■□□□□ 0.93
HLA-A-202ENST00000376806 ERVV-2B6SEH9 535 aa20.85■□□□□ 0.93
HLA-A-202ENST00000376806 ITGB4P16144 1822 aa20.85■□□□□ 0.93
HLA-A-202ENST00000376806 NRAPQ86VF7 1730 aa20.84■□□□□ 0.93
HLA-A-202ENST00000376806 NBPF7P0C2Y1 421 aaPredicted RBP20.84■□□□□ 0.93
HLA-A-202ENST00000376806 SSH3Q8TE77 659 aa20.84■□□□□ 0.93
HLA-A-202ENST00000376806 NGLY1Q96IV0 654 aa20.84■□□□□ 0.93
HLA-A-202ENST00000376806 DISP2A7MBM2 1401 aa20.83■□□□□ 0.93
HLA-A-202ENST00000376806 BCL11AQ9H165 835 aa20.83■□□□□ 0.92
HLA-A-202ENST00000376806 DAXXQ9UER7 740 aaPredicted RBP20.83■□□□□ 0.92
HLA-A-202ENST00000376806 POLA2Q14181 598 aa20.82■□□□□ 0.92
HLA-A-202ENST00000376806 C22orf23Q9BZE7 217 aa20.82■□□□□ 0.92
HLA-A-202ENST00000376806 TNS2Q63HR2 1409 aa20.82■□□□□ 0.92
HLA-A-202ENST00000376806 NUP188Q5SRE5 1749 aa20.82■□□□□ 0.92
HLA-A-202ENST00000376806 CDC45O75419 566 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 MYL6BP14649 208 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 AIMP1Q12904 312 aaKnown RBP20.81■□□□□ 0.92
HLA-A-202ENST00000376806 MEX3CQ5U5Q3 659 aaKnown RBP20.81■□□□□ 0.92
HLA-A-202ENST00000376806 DDX54Q8TDD1 881 aaKnown RBP20.81■□□□□ 0.92
HLA-A-202ENST00000376806 LRRCC1Q9C099 1032 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 USP16Q9Y5T5 823 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 TBC1D9Q6ZT07 1266 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 LINS1Q8NG48 757 aa20.81■□□□□ 0.92
HLA-A-202ENST00000376806 SLIT2O94813 1529 aa20.8■□□□□ 0.92
HLA-A-202ENST00000376806 SLC4A3P48751 1232 aa20.8■□□□□ 0.92
HLA-A-202ENST00000376806 LRP10Q7Z4F1 713 aa20.8■□□□□ 0.92
HLA-A-202ENST00000376806 XAGE3Q8WTP9 111 aa20.8■□□□□ 0.92
HLA-A-202ENST00000376806 USP35Q9P2H5 1018 aa20.8■□□□□ 0.92
HLA-A-202ENST00000376806 CWF19L2Q2TBE0 894 aaKnown RBP20.79■□□□□ 0.92
HLA-A-202ENST00000376806 SALL3Q9BXA9 1300 aa20.79■□□□□ 0.92
HLA-A-202ENST00000376806 ILDR1Q86SU0 546 aaPredicted RBP20.79■□□□□ 0.92
HLA-A-202ENST00000376806 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
HLA-A-202ENST00000376806 C9orf78Q9NZ63 289 aaPredicted RBP20.79■□□□□ 0.92
HLA-A-202ENST00000376806 RIC3Q7Z5B4 369 aa20.78■□□□□ 0.92
HLA-A-202ENST00000376806 OSBPL3Q9H4L5 887 aa20.78■□□□□ 0.92
HLA-A-202ENST00000376806 BCL9LQ86UU0 1499 aa20.78■□□□□ 0.92
HLA-A-202ENST00000376806 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
HLA-A-202ENST00000376806 SRGAP3O43295 1099 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 COPS6Q7L5N1 327 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 AK9Q5TCS8 1911 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 UTYO14607 1347 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 MTX1Q13505 466 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 BECN1Q14457 450 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.92
HLA-A-202ENST00000376806 PDE1AP54750 535 aa20.76■□□□□ 0.91
HLA-A-202ENST00000376806 GRM8O00222 908 aa20.75■□□□□ 0.91
HLA-A-202ENST00000376806 RAB11FIP3O75154 756 aa20.75■□□□□ 0.91
HLA-A-202ENST00000376806 IGKV5-2P06315 115 aa20.75■□□□□ 0.91
HLA-A-202ENST00000376806 UNC5CLQ8IV45 518 aa20.75■□□□□ 0.91
HLA-A-202ENST00000376806 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms