RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 PNPLA7Q6ZV29 1317 aa27.1■■□□□ 1.93
HLA-C-201ENST00000376228 SSH1Q8WYL5 1049 aa27.1■■□□□ 1.93
HLA-C-201ENST00000376228 ATF5Q9Y2D1 282 aaPredicted RBP27.1■■□□□ 1.93
HLA-C-201ENST00000376228 MRC1P22897 1456 aa27.09■■□□□ 1.93
HLA-C-201ENST00000376228 MS4A1P11836 297 aa27.09■■□□□ 1.93
HLA-C-201ENST00000376228 RBM42Q9BTD8 480 aaKnown RBP27.09■■□□□ 1.93
HLA-C-201ENST00000376228 ATP6V1AP38606 617 aa27.08■■□□□ 1.93
HLA-C-201ENST00000376228 CEMIPQ8WUJ3 1361 aa27.08■■□□□ 1.93
HLA-C-201ENST00000376228 UBR3Q6ZT12 1888 aa27.08■■□□□ 1.93
HLA-C-201ENST00000376228 ITPK1Q13572 414 aa27.07■■□□□ 1.92
HLA-C-201ENST00000376228 LINC00116Q8NCU8 138 aa27.07■■□□□ 1.92
HLA-C-201ENST00000376228 SLC52A2Q9HAB3 445 aa27.07■■□□□ 1.92
HLA-C-201ENST00000376228 SMC4Q9NTJ3 1288 aa27.07■■□□□ 1.92
HLA-C-201ENST00000376228 KIF16BQ96L93 1317 aa27.06■■□□□ 1.92
HLA-C-201ENST00000376228 CANXP27824 592 aaKnown RBP27.06■■□□□ 1.92
HLA-C-201ENST00000376228 AAMPQ13685 434 aa27.06■■□□□ 1.92
HLA-C-201ENST00000376228 ZKSCAN2Q63HK3 967 aa27.06■■□□□ 1.92
HLA-C-201ENST00000376228 COL5A3P25940 1745 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-201ENST00000376228 ZNF831Q5JPB2 1677 aa27.06■■□□□ 1.92
HLA-C-201ENST00000376228 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
HLA-C-201ENST00000376228 IL17REQ8NFR9 667 aa27.06■■□□□ 1.92
HLA-C-201ENST00000376228 SLC4A9Q96Q91 983 aa27.06■■□□□ 1.92
HLA-C-201ENST00000376228 SIPA1L3O60292 1781 aaPredicted RBP27.04■■□□□ 1.92
HLA-C-201ENST00000376228 PTCD1O75127 700 aaKnown RBP27.04■■□□□ 1.92
HLA-C-201ENST00000376228 TSPYL6Q8N831 410 aa27.04■■□□□ 1.92
HLA-C-201ENST00000376228 C8orf58Q8NAV2 365 aa27.04■■□□□ 1.92
HLA-C-201ENST00000376228 FRAT1Q92837 279 aaPredicted RBP27.04■■□□□ 1.92
HLA-C-201ENST00000376228 BCL2L13Q9BXK5 485 aa27.04■■□□□ 1.92
HLA-C-201ENST00000376228 MTFR1LQ9H019 292 aa27.04■■□□□ 1.92
HLA-C-201ENST00000376228 SMIM5Q71RC9 77 aa27.03■■□□□ 1.92
HLA-C-201ENST00000376228 AK7Q96M32 723 aa27.03■■□□□ 1.92
HLA-C-201ENST00000376228 TJP1Q07157 1748 aa27.03■■□□□ 1.92
HLA-C-201ENST00000376228 IPO8O15397 1037 aaKnown RBP27.02■■□□□ 1.92
HLA-C-201ENST00000376228 MSH5O43196 834 aa27.02■■□□□ 1.92
HLA-C-201ENST00000376228 AMIGO3Q86WK7 504 aa27.02■■□□□ 1.92
HLA-C-201ENST00000376228 PPP1R1BQ9UD71 204 aaPredicted RBP27.02■■□□□ 1.92
HLA-C-201ENST00000376228 PTGER2P43116 358 aa27.01■■□□□ 1.91
HLA-C-201ENST00000376228 SLC39A6Q13433 755 aa27.01■■□□□ 1.91
HLA-C-201ENST00000376228 COL23A1Q86Y22 540 aaPredicted RBP27.01■■□□□ 1.91
HLA-C-201ENST00000376228 SOS1Q07889 1333 aaPredicted RBP27.01■■□□□ 1.91
HLA-C-201ENST00000376228 TAF7Q15545 349 aaPredicted RBP27■■□□□ 1.91
HLA-C-201ENST00000376228 ARHGAP45Q92619 1136 aa27■■□□□ 1.91
HLA-C-201ENST00000376228 PHF14O94880 888 aa27■■□□□ 1.91
HLA-C-201ENST00000376228 TSPYL4Q9UJ04 414 aa27■■□□□ 1.91
HLA-C-201ENST00000376228 UBR2Q8IWV8 1755 aa26.99■■□□□ 1.91
HLA-C-201ENST00000376228 ATF7IPQ6VMQ6 1270 aa26.99■■□□□ 1.91
HLA-C-201ENST00000376228 MRPL50Q8N5N7 158 aaKnown RBP26.99■■□□□ 1.91
HLA-C-201ENST00000376228 MYH14Q7Z406 1995 aaKnown RBP26.98■■□□□ 1.91
HLA-C-201ENST00000376228 COL24A1Q17RW2 1714 aa26.98■■□□□ 1.91
HLA-C-201ENST00000376228 KDM3BQ7LBC6 1761 aa26.98■■□□□ 1.91
HLA-C-201ENST00000376228 CACNA1FO60840 1977 aa26.98■■□□□ 1.91
HLA-C-201ENST00000376228 HMGB2P26583 209 aaKnown RBP26.97■■□□□ 1.91
HLA-C-201ENST00000376228 DZIP1LQ8IYY4 767 aaKnown RBP26.97■■□□□ 1.91
HLA-C-201ENST00000376228 PANK1Q8TE04 598 aa26.97■■□□□ 1.91
HLA-C-201ENST00000376228 KCPQ6ZWJ8 1503 aa26.97■■□□□ 1.91
HLA-C-201ENST00000376228 GNPATO15228 680 aa26.96■■□□□ 1.91
HLA-C-201ENST00000376228 TEFQ10587 303 aa26.96■■□□□ 1.91
HLA-C-201ENST00000376228 NOB1Q9ULX3 412 aaKnown RBP26.96■■□□□ 1.91
HLA-C-201ENST00000376228 CICQ96RK0 1608 aaPredicted RBP26.96■■□□□ 1.91
HLA-C-201ENST00000376228 SGIP1Q9BQI5 828 aa26.95■■□□□ 1.91
HLA-C-201ENST00000376228 RLBP1P12271 317 aa26.95■■□□□ 1.9
HLA-C-201ENST00000376228 TRIM27P14373 513 aa26.95■■□□□ 1.9
HLA-C-201ENST00000376228 SLC16A10Q8TF71 515 aa26.95■■□□□ 1.9
HLA-C-201ENST00000376228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.94■■□□□ 1.9
HLA-C-201ENST00000376228 MSL1Q68DK7 614 aa26.94■■□□□ 1.9
HLA-C-201ENST00000376228 COG6Q9Y2V7 657 aa26.94■■□□□ 1.9
HLA-C-201ENST00000376228 ELL2O00472 640 aaPredicted RBP26.93■■□□□ 1.9
HLA-C-201ENST00000376228 MVPQ14764 893 aaKnown RBP26.92■■□□□ 1.9
HLA-C-201ENST00000376228 FTSJ3Q8IY81 847 aaKnown RBP26.91■■□□□ 1.9
HLA-C-201ENST00000376228 FLAD1Q8NFF5 587 aa26.91■■□□□ 1.9
HLA-C-201ENST00000376228 MIS18AQ9NYP9 233 aa26.91■■□□□ 1.9
HLA-C-201ENST00000376228 TNNQ9UQP3 1299 aa26.91■■□□□ 1.9
HLA-C-201ENST00000376228 SSFA2P28290 1259 aa26.9■■□□□ 1.9
HLA-C-201ENST00000376228 DNAJC10Q8IXB1 793 aa26.9■■□□□ 1.9
HLA-C-201ENST00000376228 TTC5Q8N0Z6 440 aa26.9■■□□□ 1.9
HLA-C-201ENST00000376228 CLUAP1Q96AJ1 413 aa26.9■■□□□ 1.9
HLA-C-201ENST00000376228 CNTNAP4Q9C0A0 1308 aa26.9■■□□□ 1.9
HLA-C-201ENST00000376228 C4AP0C0L4 1744 aa26.89■■□□□ 1.9
HLA-C-201ENST00000376228 CRKLP46109 303 aaKnown RBP26.88■■□□□ 1.89
HLA-C-201ENST00000376228 KRT24Q2M2I5 525 aa26.88■■□□□ 1.89
HLA-C-201ENST00000376228 ARXQ96QS3 562 aa26.88■■□□□ 1.89
HLA-C-201ENST00000376228 ZNF790Q6PG37 636 aa26.87■■□□□ 1.89
HLA-C-201ENST00000376228 DDX19BQ9UMR2 479 aa26.87■■□□□ 1.89
HLA-C-201ENST00000376228 RTCBQ9Y3I0 505 aaKnown RBP26.87■■□□□ 1.89
HLA-C-201ENST00000376228 KDM2BQ8NHM5 1336 aa26.87■■□□□ 1.89
HLA-C-201ENST00000376228 BTBD11A6QL63 1104 aa26.86■■□□□ 1.89
HLA-C-201ENST00000376228 POLD1P28340 1107 aa26.86■■□□□ 1.89
HLA-C-201ENST00000376228 RC3H1Q5TC82 1133 aaKnown RBP26.86■■□□□ 1.89
HLA-C-201ENST00000376228 API5Q9BZZ5 524 aaKnown RBP26.86■■□□□ 1.89
HLA-C-201ENST00000376228 KCNQ3O43525 872 aa26.85■■□□□ 1.89
HLA-C-201ENST00000376228 FHDC1Q9C0D6 1143 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-201ENST00000376228 HOXB7P09629 217 aa26.85■■□□□ 1.89
HLA-C-201ENST00000376228 CENPQQ7L2Z9 268 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-201ENST00000376228 ZNF496Q96IT1 587 aaPredicted RBP26.85■■□□□ 1.89
HLA-C-201ENST00000376228 CHMP4AQ9BY43 222 aa26.85■■□□□ 1.89
HLA-C-201ENST00000376228 ABCC4O15439 1325 aa26.83■■□□□ 1.89
HLA-C-201ENST00000376228 PTPRCP08575 1304 aa26.83■■□□□ 1.89
HLA-C-201ENST00000376228 RPS6KA4O75676 772 aa26.83■■□□□ 1.89
HLA-C-201ENST00000376228 TRAPPC3LQ5T215 181 aa26.83■■□□□ 1.89
HLA-C-201ENST00000376228 KLHL34Q8N239 644 aa26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms