RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 HTRA3P83110 453 aa22.07■■□□□ 1.12
CLIC1-208ENST00000375784 JMYQ8N9B5 988 aa22.07■■□□□ 1.12
CLIC1-208ENST00000375784 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
CLIC1-208ENST00000375784 CNTNAP4Q9C0A0 1308 aa22.06■■□□□ 1.12
CLIC1-208ENST00000375784 FSTL1Q12841 308 aa22.06■■□□□ 1.12
CLIC1-208ENST00000375784 C4AP0C0L4 1744 aa22.06■■□□□ 1.12
CLIC1-208ENST00000375784 PRKRIP1Q9H875 184 aaPredicted RBP22.05■■□□□ 1.12
CLIC1-208ENST00000375784 PIM2Q9P1W9 311 aa22.05■■□□□ 1.12
CLIC1-208ENST00000375784 WDR90Q96KV7 1748 aa22.05■■□□□ 1.12
CLIC1-208ENST00000375784 COL13A1Q5TAT6 717 aaPredicted RBP22.04■■□□□ 1.12
CLIC1-208ENST00000375784 TEFQ10587 303 aa22.03■■□□□ 1.12
CLIC1-208ENST00000375784 ZNF831Q5JPB2 1677 aa22.03■■□□□ 1.12
CLIC1-208ENST00000375784 KDM2BQ8NHM5 1336 aa22.03■■□□□ 1.12
CLIC1-208ENST00000375784 PTCD1O75127 700 aaKnown RBP22.02■■□□□ 1.12
CLIC1-208ENST00000375784 IL17REQ8NFR9 667 aa22.02■■□□□ 1.12
CLIC1-208ENST00000375784 RTF1Q92541 710 aaKnown RBP22.02■■□□□ 1.12
CLIC1-208ENST00000375784 KCPQ6ZWJ8 1503 aa22.01■■□□□ 1.11
CLIC1-208ENST00000375784 DALRD3Q5D0E6 543 aaKnown RBP22.01■■□□□ 1.11
CLIC1-208ENST00000375784 RNF181Q9P0P0 153 aa22.01■■□□□ 1.11
CLIC1-208ENST00000375784 BRCA1P38398 1863 aaKnown RBP22■■□□□ 1.11
CLIC1-208ENST00000375784 RRAGCQ9HB90 399 aa22■■□□□ 1.11
CLIC1-208ENST00000375784 SCN11AQ9UI33 1791 aa21.99■■□□□ 1.11
CLIC1-208ENST00000375784 COL5A3P25940 1745 aaPredicted RBP21.98■■□□□ 1.11
CLIC1-208ENST00000375784 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
CLIC1-208ENST00000375784 SRP68Q9UHB9 627 aaKnown RBP21.98■■□□□ 1.11
CLIC1-208ENST00000375784 ARFGEF1Q9Y6D6 1849 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 DDR1Q08345 913 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 FKBP8Q14318 412 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 TTC5Q8N0Z6 440 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 MAPK8IP3Q9UPT6 1336 aa21.97■■□□□ 1.11
CLIC1-208ENST00000375784 MRC1P22897 1456 aa21.96■■□□□ 1.11
CLIC1-208ENST00000375784 CRKLP46109 303 aaKnown RBP21.96■■□□□ 1.11
CLIC1-208ENST00000375784 WDR43Q15061 677 aaKnown RBP eCLIP21.96■■□□□ 1.111e-7■■■□□ 15.4
CLIC1-208ENST00000375784 USP42Q9H9J4 1324 aaKnown RBP21.96■■□□□ 1.11
CLIC1-208ENST00000375784 CHRNA5P30532 468 aa21.95■■□□□ 1.1
CLIC1-208ENST00000375784 SMC1BQ8NDV3 1235 aa21.95■■□□□ 1.1
CLIC1-208ENST00000375784 CEMIPQ8WUJ3 1361 aa21.95■■□□□ 1.1
CLIC1-208ENST00000375784 CAPN15O75808 1086 aa21.94■■□□□ 1.1
CLIC1-208ENST00000375784 MCM10Q7L590 875 aa21.93■■□□□ 1.1
CLIC1-208ENST00000375784 MYH14Q7Z406 1995 aaKnown RBP21.93■■□□□ 1.1
CLIC1-208ENST00000375784 TNS4Q8IZW8 715 aa21.93■■□□□ 1.1
CLIC1-208ENST00000375784 ADAMTS7Q9UKP4 1686 aa21.93■■□□□ 1.1
CLIC1-208ENST00000375784 BTBD11A6QL63 1104 aa21.92■■□□□ 1.1
CLIC1-208ENST00000375784 POLRMTO00411 1230 aaKnown RBP21.92■■□□□ 1.1
CLIC1-208ENST00000375784 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
CLIC1-208ENST00000375784 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
CLIC1-208ENST00000375784 VSIG10Q8N0Z9 540 aa21.92■■□□□ 1.1
CLIC1-208ENST00000375784 TM4SF1P30408 202 aa21.91■■□□□ 1.1
CLIC1-208ENST00000375784 ZC3H4Q9UPT8 1303 aaKnown RBP21.9■■□□□ 1.1
CLIC1-208ENST00000375784 ANP32CO43423 234 aa21.9■■□□□ 1.1
CLIC1-208ENST00000375784 PRELPP51888 382 aa21.9■■□□□ 1.1
CLIC1-208ENST00000375784 TNRC6CQ9HCJ0 1690 aaKnown RBP21.89■■□□□ 1.1
CLIC1-208ENST00000375784 DCTN1Q14203 1278 aa21.89■■□□□ 1.09
CLIC1-208ENST00000375784 INTS5Q6P9B9 1019 aaKnown RBP21.89■■□□□ 1.09
CLIC1-208ENST00000375784 DNAJC10Q8IXB1 793 aa21.89■■□□□ 1.09
CLIC1-208ENST00000375784 RASSF7Q02833 373 aa21.88■■□□□ 1.09
CLIC1-208ENST00000375784 TAF7Q15545 349 aaPredicted RBP21.88■■□□□ 1.09
CLIC1-208ENST00000375784 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
CLIC1-208ENST00000375784 FMNL2Q96PY5 1086 aa21.87■■□□□ 1.09
CLIC1-208ENST00000375784 TEX13AQ9BXU3 409 aaPredicted RBP21.87■■□□□ 1.09
CLIC1-208ENST00000375784 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
CLIC1-208ENST00000375784 GLTPD2A6NH11 291 aa21.86■■□□□ 1.09
CLIC1-208ENST00000375784 ZPR1O75312 459 aa21.86■■□□□ 1.09
CLIC1-208ENST00000375784 STARD3NLO95772 234 aa21.86■■□□□ 1.09
CLIC1-208ENST00000375784 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
CLIC1-208ENST00000375784 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
CLIC1-208ENST00000375784 RIPK4P57078 832 aa21.86■■□□□ 1.09
CLIC1-208ENST00000375784 USPL1Q5W0Q7 1092 aa21.86■■□□□ 1.09
CLIC1-208ENST00000375784 VIRMAQ69YN4 1812 aaKnown RBP21.85■■□□□ 1.09
CLIC1-208ENST00000375784 LMNB1P20700 586 aa21.85■■□□□ 1.09
CLIC1-208ENST00000375784 PNISRQ8TF01 805 aaKnown RBP21.85■■□□□ 1.09
CLIC1-208ENST00000375784 RUNDC1Q96C34 613 aa21.85■■□□□ 1.09
CLIC1-208ENST00000375784 SBF1O95248 1867 aa21.85■■□□□ 1.09
CLIC1-208ENST00000375784 LMOD3Q0VAK6 560 aa21.84■■□□□ 1.09
CLIC1-208ENST00000375784 CCDC146Q8IYE0 955 aa21.84■■□□□ 1.09
CLIC1-208ENST00000375784 HEG1Q9ULI3 1381 aa21.84■■□□□ 1.09
CLIC1-208ENST00000375784 TJP1Q07157 1748 aa21.83■■□□□ 1.09
CLIC1-208ENST00000375784 HSPA1AP0DMV8 641 aaKnown RBP21.83■■□□□ 1.09
CLIC1-208ENST00000375784 HSPA1BP0DMV9 641 aaKnown RBP21.83■■□□□ 1.09
CLIC1-208ENST00000375784 TMPOP42166 694 aaKnown RBP21.83■■□□□ 1.09
CLIC1-208ENST00000375784 SOS1Q07889 1333 aaPredicted RBP21.82■■□□□ 1.08
CLIC1-208ENST00000375784 KCNQ3O43525 872 aa21.82■■□□□ 1.08
CLIC1-208ENST00000375784 NFIXQ14938 502 aa21.82■■□□□ 1.08
CLIC1-208ENST00000375784 NEUROD2Q15784 382 aa21.8■■□□□ 1.08
CLIC1-208ENST00000375784 TTLL6Q8N841 843 aa21.8■■□□□ 1.08
CLIC1-208ENST00000375784 NARFQ9UHQ1 456 aa21.8■■□□□ 1.08
CLIC1-208ENST00000375784 SNRPA1P09661 255 aaKnown RBP21.79■■□□□ 1.08
CLIC1-208ENST00000375784 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
CLIC1-208ENST00000375784 MIS18AQ9NYP9 233 aa21.79■■□□□ 1.08
CLIC1-208ENST00000375784 PCNTO95613 3336 aa21.78■■□□□ 1.08
CLIC1-208ENST00000375784 SERPINB2P05120 415 aa21.78■■□□□ 1.08
CLIC1-208ENST00000375784 CANXP27824 592 aaKnown RBP21.78■■□□□ 1.08
CLIC1-208ENST00000375784 ZBTB1Q9Y2K1 713 aa21.78■■□□□ 1.08
CLIC1-208ENST00000375784 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
CLIC1-208ENST00000375784 SIPA1L3O60292 1781 aaPredicted RBP21.78■■□□□ 1.08
CLIC1-208ENST00000375784 POTECB2RU33 542 aa21.77■■□□□ 1.08
CLIC1-208ENST00000375784 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
CLIC1-208ENST00000375784 BCL2L12Q9HB09 334 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms