RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
SPEN-201ENST00000375759 TMEM266Q2M3C6 531 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 DNAAF4Q8WXU2 420 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 KANK3Q6NY19 840 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 CETN1Q12798 172 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
SPEN-201ENST00000375759 CFTRP13569 1480 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 IL1RAPL2Q9NP60 686 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 HSPA4P34932 840 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 TMC6Q7Z403 805 aa11.36□□□□□ -0.59
SPEN-201ENST00000375759 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 TIAM1Q13009 1591 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 ATAD2Q6PL18 1390 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 MPHOSPH10O00566 681 aaKnown RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 HSF2BPO75031 334 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 CKAP4Q07065 602 aaKnown RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 NFE2L2Q16236 605 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 CDK19Q9BWU1 502 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 CTNNBL1Q8WYA6 563 aaPredicted RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 ABCC11Q96J66 1382 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 IFI16Q16666 785 aaKnown RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 PRPF40BQ6NWY9 871 aaKnown RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 TBC1D2Q9BYX2 928 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 TUBB4BP68371 445 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 IDH1O75874 414 aaKnown RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 CKAP2LQ8IYA6 745 aa11.35□□□□□ -0.59
SPEN-201ENST00000375759 CCDC97Q96F63 343 aaPredicted RBP11.35□□□□□ -0.59
SPEN-201ENST00000375759 EXOC6BQ9Y2D4 811 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 SYNJ2O15056 1496 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 TMPOP42166 694 aaKnown RBP11.34□□□□□ -0.59
SPEN-201ENST00000375759 FSIP1Q8NA03 581 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 ZHX1Q9UKY1 873 aaPredicted RBP11.34□□□□□ -0.59
SPEN-201ENST00000375759 USP5P45974 858 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 TDRD12Q587J7 1177 aaKnown RBP11.34□□□□□ -0.59
SPEN-201ENST00000375759 AMPD3Q01432 767 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 KLHL40Q2TBA0 621 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 PPP4R3AQ6IN85 833 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 MAATS1Q7Z4T9 603 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 ANKS4BQ8N8V4 417 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 A0A087WZG4 1122 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 IGHMBP2P38935 993 aaKnown RBP11.34□□□□□ -0.59
SPEN-201ENST00000375759 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
SPEN-201ENST00000375759 ZNF165P49910 485 aa11.34□□□□□ -0.59
SPEN-201ENST00000375759 CTCFLQ8NI51 663 aaPredicted RBP11.34□□□□□ -0.59
SPEN-201ENST00000375759 IBSPP21815 317 aaPredicted RBP11.33□□□□□ -0.59
SPEN-201ENST00000375759 SSFA2P28290 1259 aa11.33□□□□□ -0.59
SPEN-201ENST00000375759 JADE2Q9NQC1 790 aa11.33□□□□□ -0.59
SPEN-201ENST00000375759 CTNNA2P26232 953 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 NSRP1Q9H0G5 558 aaKnown RBP11.33□□□□□ -0.6
SPEN-201ENST00000375759 NAPBQ9H115 298 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 STX6O43752 255 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 SLC12A7Q9Y666 1083 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 TUBB4AP04350 444 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
SPEN-201ENST00000375759 NUTM1Q86Y26 1132 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 RBM5P52756 815 aaKnown RBP eCLIP11.33□□□□□ -0.6
SPEN-201ENST00000375759 GOLIM4O00461 696 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 GNAT3A8MTJ3 354 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 CFAP57Q96MR6 1250 aa11.33□□□□□ -0.6
SPEN-201ENST00000375759 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
SPEN-201ENST00000375759 LRPPRCP42704 1394 aaKnown RBP11.32□□□□□ -0.6
SPEN-201ENST00000375759 IQCA1Q86XH1 822 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 DAPK1P53355 1430 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 NSD3Q9BZ95 1437 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 RTEL1-TNFRSF6BF6WH68 1400 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 PLVAPQ9BX97 442 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 RNF41Q9H4P4 317 aaPredicted RBP11.32□□□□□ -0.6
SPEN-201ENST00000375759 MACROD2A1Z1Q3 448 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 IKBKGQ9Y6K9 419 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
SPEN-201ENST00000375759 SREK1Q8WXA9 508 aaKnown RBP11.32□□□□□ -0.6
SPEN-201ENST00000375759 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 CABP1Q9NZU7 370 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 IGF1RP08069 1367 aa11.32□□□□□ -0.6
SPEN-201ENST00000375759 BAG4O95429 457 aaKnown RBP11.31□□□□□ -0.6
SPEN-201ENST00000375759 GNG11P61952 73 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 CCDC12Q8WUD4 166 aaPredicted RBP11.31□□□□□ -0.6
SPEN-201ENST00000375759 ZSCAN16Q9H4T2 348 aaPredicted RBP11.31□□□□□ -0.6
SPEN-201ENST00000375759 DNA2P51530 1060 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 SRRTQ9BXP5 876 aaKnown RBP11.31□□□□□ -0.6
SPEN-201ENST00000375759 CTAGE1Q96RT6 745 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 ZSCAN23Q3MJ62 389 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 GOLGA8BA8MQT2 603 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 ZSCAN29Q8IWY8 852 aaPredicted RBP11.31□□□□□ -0.6
SPEN-201ENST00000375759 LRSAM1Q6UWE0 723 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 FERP16591 822 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 CLCN1P35523 988 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 TMCO5BA8MYB1 307 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 CCDC172P0C7W6 258 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 FERMT1Q9BQL6 677 aa11.31□□□□□ -0.6
SPEN-201ENST00000375759 METTL24Q5JXM2 366 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms