RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 ZNF790Q6PG37 636 aa22.46■■□□□ 1.19
RXRB-202ENST00000374685 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
RXRB-202ENST00000374685 JARID2Q92833 1246 aaPredicted RBP22.46■■□□□ 1.19
RXRB-202ENST00000374685 ADCY9O60503 1353 aa22.46■■□□□ 1.19
RXRB-202ENST00000374685 PHKG2P15735 406 aa22.46■■□□□ 1.19
RXRB-202ENST00000374685 SPG7Q9UQ90 795 aa22.46■■□□□ 1.19
RXRB-202ENST00000374685 STRN4Q9NRL3 753 aa22.45■■□□□ 1.18
RXRB-202ENST00000374685 ZNF496Q96IT1 587 aaPredicted RBP22.44■■□□□ 1.18
RXRB-202ENST00000374685 ZMYND15Q9H091 742 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 HOXB7P09629 217 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 TOM1L2Q6ZVM7 507 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 SLC52A2Q9HAB3 445 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 MEGF6O75095 1541 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 CYP27B1O15528 508 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 UNC5CLQ8IV45 518 aa22.44■■□□□ 1.18
RXRB-202ENST00000374685 PA2G4Q9UQ80 394 aaKnown RBP22.44■■□□□ 1.18
RXRB-202ENST00000374685 IBTKQ9P2D0 1353 aaPredicted RBP22.43■■□□□ 1.18
RXRB-202ENST00000374685 SPATA31A3Q5VYP0 1347 aa22.43■■□□□ 1.18
RXRB-202ENST00000374685 RIC3Q7Z5B4 369 aa22.43■■□□□ 1.18
RXRB-202ENST00000374685 IFNL2Q8IZJ0 200 aa22.43■■□□□ 1.18
RXRB-202ENST00000374685 TTC5Q8N0Z6 440 aa22.43■■□□□ 1.18
RXRB-202ENST00000374685 USP26Q9BXU7 913 aa22.43■■□□□ 1.18
RXRB-202ENST00000374685 CHMP5Q9NZZ3 219 aa22.42■■□□□ 1.18
RXRB-202ENST00000374685 GZF1Q9H116 711 aaPredicted RBP22.42■■□□□ 1.18
RXRB-202ENST00000374685 SSH3Q8TE77 659 aa22.41■■□□□ 1.18
RXRB-202ENST00000374685 TNS3Q68CZ2 1445 aa22.41■■□□□ 1.18
RXRB-202ENST00000374685 KSR2Q6VAB6 950 aa22.41■■□□□ 1.18
RXRB-202ENST00000374685 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
RXRB-202ENST00000374685 RHPN1Q8TCX5 695 aa22.4■■□□□ 1.18
RXRB-202ENST00000374685 DDX54Q8TDD1 881 aaKnown RBP22.4■■□□□ 1.18
RXRB-202ENST00000374685 KIF1AQ12756 1690 aa22.4■■□□□ 1.18
RXRB-202ENST00000374685 CABP4P57796 275 aa22.39■■□□□ 1.18
RXRB-202ENST00000374685 SLAIN2Q9P270 581 aa22.39■■□□□ 1.18
RXRB-202ENST00000374685 KDM6AO15550 1401 aaPredicted RBP22.39■■□□□ 1.18
RXRB-202ENST00000374685 ERC2O15083 957 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 NOL8Q76FK4 1167 aaKnown RBP22.39■■□□□ 1.17
RXRB-202ENST00000374685 XAGE3Q8WTP9 111 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 SIL1Q9H173 461 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 ANO2Q9NQ90 1003 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 K7ELQ4 463 aaPredicted RBP22.39■■□□□ 1.17
RXRB-202ENST00000374685 COPS6Q7L5N1 327 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 CHMP4AQ9BY43 222 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 LMO7Q8WWI1 1683 aa22.39■■□□□ 1.17
RXRB-202ENST00000374685 HYPKQ9NX55 129 aa22.38■■□□□ 1.17
RXRB-202ENST00000374685 VSIG10Q8N0Z9 540 aa22.38■■□□□ 1.17
RXRB-202ENST00000374685 SNX21Q969T3 373 aa22.38■■□□□ 1.17
RXRB-202ENST00000374685 NCAPD2Q15021 1401 aa22.38■■□□□ 1.17
RXRB-202ENST00000374685 REC8O95072 547 aa22.37■■□□□ 1.17
RXRB-202ENST00000374685 DDX21Q9NR30 783 aaKnown RBP eCLIP22.37■■□□□ 1.17
RXRB-202ENST00000374685 CACNA1FO60840 1977 aa22.37■■□□□ 1.17
RXRB-202ENST00000374685 KDM3BQ7LBC6 1761 aa22.37■■□□□ 1.17
RXRB-202ENST00000374685 PHRF1Q9P1Y6 1649 aaKnown RBP22.37■■□□□ 1.17
RXRB-202ENST00000374685 ALS2Q96Q42 1657 aa22.37■■□□□ 1.17
RXRB-202ENST00000374685 KLHDC4Q8TBB5 520 aa22.36■■□□□ 1.17
RXRB-202ENST00000374685 MYD88Q99836 296 aa22.36■■□□□ 1.17
RXRB-202ENST00000374685 DDX58O95786 925 aaKnown RBP22.36■■□□□ 1.17
RXRB-202ENST00000374685 PDIA6Q15084 440 aa22.36■■□□□ 1.17
RXRB-202ENST00000374685 OSBPL3Q9H4L5 887 aa22.36■■□□□ 1.17
RXRB-202ENST00000374685 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
RXRB-202ENST00000374685 PTCD1O75127 700 aaKnown RBP22.35■■□□□ 1.17
RXRB-202ENST00000374685 SUCLG2Q96I99 432 aa22.35■■□□□ 1.17
RXRB-202ENST00000374685 SALL3Q9BXA9 1300 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 PXDNLA1KZ92 1463 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 ATP5J2-PTCD1G3V325 749 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 POLA2Q14181 598 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 DCAF5Q96JK2 942 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 ZNF330Q9Y3S2 320 aaPredicted RBP22.34■■□□□ 1.17
RXRB-202ENST00000374685 EVA1CP58658 441 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 KIF1BPQ96EK5 621 aa22.34■■□□□ 1.17
RXRB-202ENST00000374685 BICC1Q9H694 974 aaKnown RBP22.34■■□□□ 1.17
RXRB-202ENST00000374685 GRM8O00222 908 aa22.33■■□□□ 1.17
RXRB-202ENST00000374685 MCM4P33991 863 aa22.33■■□□□ 1.17
RXRB-202ENST00000374685 RABEP1Q15276 862 aa22.33■■□□□ 1.16
RXRB-202ENST00000374685 CHMLP26374 656 aa22.32■■□□□ 1.16
RXRB-202ENST00000374685 ESYT1Q9BSJ8 1104 aa22.32■■□□□ 1.16
RXRB-202ENST00000374685 IL25Q9H293 177 aa22.32■■□□□ 1.16
RXRB-202ENST00000374685 DCCP43146 1447 aa22.32■■□□□ 1.16
RXRB-202ENST00000374685 LINS1Q8NG48 757 aa22.32■■□□□ 1.16
RXRB-202ENST00000374685 RRAGDQ9NQL2 400 aaPredicted RBP22.32■■□□□ 1.16
RXRB-202ENST00000374685 IGKV5-2P06315 115 aa22.31■■□□□ 1.16
RXRB-202ENST00000374685 NEXNQ0ZGT2 675 aa22.31■■□□□ 1.16
RXRB-202ENST00000374685 RAB11FIP3O75154 756 aa22.31■■□□□ 1.16
RXRB-202ENST00000374685 SNRPA1P09661 255 aaKnown RBP22.3■■□□□ 1.16
RXRB-202ENST00000374685 LARP1Q6PKG0 1096 aaKnown RBP22.3■■□□□ 1.16
RXRB-202ENST00000374685 HEG1Q9ULI3 1381 aa22.3■■□□□ 1.16
RXRB-202ENST00000374685 TNPO1Q92973 898 aaKnown RBP22.3■■□□□ 1.16
RXRB-202ENST00000374685 FMNL2Q96PY5 1086 aa22.3■■□□□ 1.16
RXRB-202ENST00000374685 PALD1Q9ULE6 856 aa22.3■■□□□ 1.16
RXRB-202ENST00000374685 ALDH1L1O75891 902 aa22.3■■□□□ 1.16
RXRB-202ENST00000374685 NEK4P51957 841 aa22.3■■□□□ 1.16
RXRB-202ENST00000374685 ZCRB1Q8TBF4 217 aaKnown RBP22.3■■□□□ 1.16
RXRB-202ENST00000374685 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.29■■□□□ 1.16
RXRB-202ENST00000374685 RRP9O43818 475 aaKnown RBP22.29■■□□□ 1.16
RXRB-202ENST00000374685 ANKRD13DQ6ZTN6 518 aa22.29■■□□□ 1.16
RXRB-202ENST00000374685 CLASRPQ8N2M8 674 aaKnown RBP22.29■■□□□ 1.16
RXRB-202ENST00000374685 CCDC9Q9Y3X0 531 aaKnown RBP22.29■■□□□ 1.16
RXRB-202ENST00000374685 KAZALD1Q96I82 304 aa22.28■■□□□ 1.16
RXRB-202ENST00000374685 AACSQ86V21 672 aa22.28■■□□□ 1.16
RXRB-202ENST00000374685 UPF3BQ9BZI7 483 aaKnown RBP22.28■■□□□ 1.16
RXRB-202ENST00000374685 CCDC8Q9H0W5 538 aaPredicted RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms