RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-204	ENST00000374346	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.81	□□□□□ -0.2
PTPN20-204	ENST00000374346	RHPN1	Q8TCX5	695 aa		13.81	□□□□□ -0.2
PTPN20-204	ENST00000374346	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.81	□□□□□ -0.2
PTPN20-204	ENST00000374346	IL1RAPL2	Q9NP60	686 aa		13.81	□□□□□ -0.2
PTPN20-204	ENST00000374346	HDAC5	Q9UQL6	1122 aa		13.81	□□□□□ -0.2
PTPN20-204	ENST00000374346	POLA2	Q14181	598 aa		13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	NUTM2G	Q5VZR2	741 aa		13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	C14orf37	Q86TY3	774 aa		13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	PDLIM2	Q96JY6	352 aa		13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	TMEM63C	Q9P1W3	806 aa		13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	RBM27	Q9P2N5	1060 aa	Known RBP	13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	MARF1	Q9Y4F3	1742 aa	Known RBP	13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	NOL8	Q76FK4	1167 aa	Known RBP	13.8	□□□□□ -0.2
PTPN20-204	ENST00000374346	LTN1	O94822	1766 aa		13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	NUTM1	Q86Y26	1132 aa		13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	UPF3B	Q9BZI7	483 aa	Known RBP	13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	PHAX	Q9H814	394 aa	Known RBP	13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	NOL7	Q9UMY1	257 aa	Known RBP	13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	CEMIP	Q8WUJ3	1361 aa		13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	RAD50	Q92878	1312 aa		13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	EIF2S2	P20042	333 aa	Known RBP	13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	UNC5CL	Q8IV45	518 aa		13.79	□□□□□ -0.2
PTPN20-204	ENST00000374346	RRP9	O43818	475 aa	Known RBP	13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	MCM5	P33992	734 aa		13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	GLIPR1L2	Q4G1C9	344 aa		13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	DNAAF4	Q8WXU2	420 aa		13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	TTC41P	Q6P2S7	1318 aa		13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	SGSM2	O43147	1006 aa		13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	PRKCSH	P14314	528 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	RUFY2	Q8WXA3	655 aa		13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.78	□□□□□ -0.2
PTPN20-204	ENST00000374346	OS9	Q13438	667 aa	Predicted RBP	13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	PI4K2B	Q8TCG2	481 aa		13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	UBE2Q2	Q8WVN8	375 aa		13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	IP6K1	Q92551	441 aa		13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	GPATCH3	Q96I76	525 aa		13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	CCDC39	Q9UFE4	941 aa		13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	ATP6V1D	Q9Y5K8	247 aa		13.77	□□□□□ -0.21
PTPN20-204	ENST00000374346	OFD1	O75665	1012 aa		13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	GLRX3	O76003	335 aa	Known RBP	13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	EIF4A1	P60842	406 aa	Known RBP	13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	TEF	Q10587	303 aa		13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	TSPY26P	Q9H489	355 aa		13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	PLEKHG5	O94827	1062 aa		13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	KCNA6	P17658	529 aa		13.76	□□□□□ -0.21
PTPN20-204	ENST00000374346	PI4KAP2	A4QPH2	592 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	TERF1	P54274	439 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	BEND3	Q5T5X7	828 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	CLASRP	Q8N2M8	674 aa	Known RBP	13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	PI4KAP1	Q8N8J0	262 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	KCNH5	Q8NCM2	988 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	CHPF2	Q9P2E5	772 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	FER1L4	A9Z1Z3	1794 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	KDM3B	Q7LBC6	1761 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	ERC1	Q8IUD2	1116 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	USHBP1	Q8N6Y0	703 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	FAM184A	Q8NB25	1140 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	PHF8	Q9UPP1	1060 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	LIMCH1	Q9UPQ0	1083 aa		13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	MED1	Q15648	1581 aa	Predicted RBP	13.75	□□□□□ -0.21
PTPN20-204	ENST00000374346	ADGRL3	Q9HAR2	1447 aa		13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	BTBD11	A6QL63	1104 aa		13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	ZNF500	O60304	480 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	LETM1	O95202	739 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	CSPP1	Q1MSJ5	1256 aa		13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	DIAPH3	Q9NSV4	1193 aa		13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	DBF4	Q9UBU7	674 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	USP42	Q9H9J4	1324 aa	Known RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	MAP4K4	O95819	1239 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	AKAP4	Q5JQC9	854 aa		13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	SNX14	Q9Y5W7	946 aa		13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	SETD1B	Q9UPS6	1966 aa	Known RBP	13.74	□□□□□ -0.21
PTPN20-204	ENST00000374346	AMOT	Q4VCS5	1084 aa		13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	CWC27	Q6UX04	472 aa	Known RBP	13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	CHAMP1	Q96JM3	812 aa		13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	LSG1	Q9H089	658 aa	Known RBP	13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	ZKSCAN5	Q9Y2L8	839 aa		13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	TCHH	Q07283	1943 aa		13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	KLHL34	Q8N239	644 aa		13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	TMEM87A	Q8NBN3	555 aa		13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN20-204	ENST00000374346	LMO7	Q8WWI1	1683 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	ALDH1L1	O75891	902 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	MTX1	Q13505	466 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	USP48	Q86UV5	1035 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	SMC3	Q9UQE7	1217 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	C1orf141	Q5JVX7	400 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	NBPF6	Q5VWK0	638 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	NBPF4	Q96M43	638 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	TTC14	Q96N46	770 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	IL25	Q9H293	177 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	LGR6	Q9HBX8	967 aa		13.72	□□□□□ -0.21
PTPN20-204	ENST00000374346	STX6	O43752	255 aa		13.71	□□□□□ -0.21
PTPN20-204	ENST00000374346	PTMA	P06454	111 aa	Known RBP	13.71	□□□□□ -0.21
PTPN20-204	ENST00000374346	IFIT2	P09913	472 aa	Known RBP	13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms