RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 CEP135Q66GS9 1140 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 FBXO38Q6PIJ6 1188 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 RBM33Q96EV2 1170 aaKnown RBP15.41■□□□□ 0.06
PRPF4-201ENST00000374198 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 MCCP23508 829 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 ANAPC15P60006 121 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 ZSCAN25Q6NSZ9 544 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 ZNF215Q9UL58 517 aaPredicted RBP15.41■□□□□ 0.06
PRPF4-201ENST00000374198 PALD1Q9ULE6 856 aa15.41■□□□□ 0.06
PRPF4-201ENST00000374198 KNDC1Q76NI1 1749 aa15.4■□□□□ 0.06
PRPF4-201ENST00000374198 RGS12O14924 1447 aa15.4■□□□□ 0.06
PRPF4-201ENST00000374198 DIP2AQ14689 1571 aa15.4■□□□□ 0.06
PRPF4-201ENST00000374198 ANKRD44Q8N8A2 993 aa15.4■□□□□ 0.06
PRPF4-201ENST00000374198 ZFP91Q96JP5 570 aaPredicted RBP15.4■□□□□ 0.06
PRPF4-201ENST00000374198 TOM1O60784 492 aa15.4■□□□□ 0.06
PRPF4-201ENST00000374198 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
PRPF4-201ENST00000374198 API5Q9BZZ5 524 aaKnown RBP15.4■□□□□ 0.06
PRPF4-201ENST00000374198 KIF24Q5T7B8 1368 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 RAD51AP2Q09MP3 1159 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 FAM200AQ8TCP9 573 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 ZNF592Q92610 1267 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 COL3A1P02461 1466 aaPredicted RBP15.39■□□□□ 0.05
PRPF4-201ENST00000374198 TCHHQ07283 1943 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 CHRM1P11229 460 aaPredicted RBP15.39■□□□□ 0.05
PRPF4-201ENST00000374198 PIP4K2BP78356 416 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 EFCC1Q9HA90 598 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 NRBP1Q9UHY1 535 aa15.39■□□□□ 0.05
PRPF4-201ENST00000374198 TMEM94Q12767 1356 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 SETBP1Q9Y6X0 1596 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 FIBPO43427 364 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 DRC7Q8IY82 874 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRPF4-201ENST00000374198 V9GYY5 206 aaPredicted RBP15.38■□□□□ 0.05
PRPF4-201ENST00000374198 ERO1AQ96HE7 468 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 AMOTL2Q9Y2J4 779 aa15.38■□□□□ 0.05
PRPF4-201ENST00000374198 APBB1O00213 710 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 ELF2Q15723 593 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 ZNF446Q9NWS9 450 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 PPLO60437 1756 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
PRPF4-201ENST00000374198 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
PRPF4-201ENST00000374198 RTF1Q92541 710 aaKnown RBP15.37■□□□□ 0.05
PRPF4-201ENST00000374198 ESYT1Q9BSJ8 1104 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.37■□□□□ 0.05
PRPF4-201ENST00000374198 NRXN3Q9Y4C0 1643 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 CHD2O14647 1828 aaKnown RBP15.37■□□□□ 0.05
PRPF4-201ENST00000374198 NWD1Q149M9 1564 aa15.37■□□□□ 0.05
PRPF4-201ENST00000374198 UPF3BQ9BZI7 483 aaKnown RBP15.36■□□□□ 0.05
PRPF4-201ENST00000374198 ATP10DQ9P241 1426 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 IL17RAQ96F46 866 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 ATP6V1DQ9Y5K8 247 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 METP08581 1390 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
PRPF4-201ENST00000374198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.36■□□□□ 0.05
PRPF4-201ENST00000374198 LUZP1Q86V48 1076 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 OSBPL3Q9H4L5 887 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
PRPF4-201ENST00000374198 TNNT3P45378 269 aaPredicted RBP15.35■□□□□ 0.05
PRPF4-201ENST00000374198 ZNF75DP51815 510 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 PLA2G4DQ86XP0 818 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 CACTINQ8WUQ7 758 aaKnown RBP15.35■□□□□ 0.05
PRPF4-201ENST00000374198 YY1AP1Q9H869 796 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 CCDC171Q6TFL3 1326 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 STX6O43752 255 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 F13A1P00488 732 aa15.35■□□□□ 0.05
PRPF4-201ENST00000374198 MRVI1Q9Y6F6 885 aa15.34■□□□□ 0.05
PRPF4-201ENST00000374198 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
PRPF4-201ENST00000374198 SYT1P21579 422 aa15.34■□□□□ 0.05
PRPF4-201ENST00000374198 PDE1AP54750 535 aa15.34■□□□□ 0.05
PRPF4-201ENST00000374198 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
PRPF4-201ENST00000374198 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
PRPF4-201ENST00000374198 TRIM5Q9C035 493 aa15.34■□□□□ 0.05
PRPF4-201ENST00000374198 PTPN14Q15678 1187 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 ANO2Q9NQ90 1003 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 FAM135BQ49AJ0 1406 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 ERBB3P21860 1342 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 TYRO3Q06418 890 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 NYAP1Q6ZVC0 841 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 GTF3C6Q969F1 213 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 RSPH14Q9UHP6 348 aa15.33■□□□□ 0.04
PRPF4-201ENST00000374198 DIAPH1O60610 1272 aaKnown RBP15.32■□□□□ 0.04
PRPF4-201ENST00000374198 SLU7O95391 586 aaKnown RBP15.32■□□□□ 0.04
PRPF4-201ENST00000374198 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
PRPF4-201ENST00000374198 RASSF4Q9H2L5 321 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 FHOD1Q9Y613 1164 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.32■□□□□ 0.04
PRPF4-201ENST00000374198 H2AFXP16104 143 aaPredicted RBP15.32■□□□□ 0.04
PRPF4-201ENST00000374198 MAP3K11Q16584 847 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 MUM1L1Q5H9M0 696 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 ZBTB9Q96C00 473 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 CBX8Q9HC52 389 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 XIRP1Q702N8 1843 aaKnown RBP15.32■□□□□ 0.04
PRPF4-201ENST00000374198 ALKQ9UM73 1620 aa15.32■□□□□ 0.04
PRPF4-201ENST00000374198 MSH6P52701 1360 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms