RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 NARFQ9UHQ1 456 aa25.98■■□□□ 1.75
TRAPPC3-204ENST00000373166 TJP1Q07157 1748 aa25.97■■□□□ 1.75
TRAPPC3-204ENST00000373166 ZC3H4Q9UPT8 1303 aaKnown RBP25.97■■□□□ 1.75
TRAPPC3-204ENST00000373166 NFIXQ14938 502 aa25.97■■□□□ 1.75
TRAPPC3-204ENST00000373166 SMC1BQ8NDV3 1235 aa25.97■■□□□ 1.75
TRAPPC3-204ENST00000373166 WDR90Q96KV7 1748 aa25.96■■□□□ 1.75
TRAPPC3-204ENST00000373166 SLC39A6Q13433 755 aa25.95■■□□□ 1.74
TRAPPC3-204ENST00000373166 RNMTO43148 476 aaKnown RBP25.94■■□□□ 1.74
TRAPPC3-204ENST00000373166 LMNB1P20700 586 aa25.94■■□□□ 1.74
TRAPPC3-204ENST00000373166 RASSF7Q02833 373 aa25.94■■□□□ 1.74
TRAPPC3-204ENST00000373166 COL15A1P39059 1388 aa25.94■■□□□ 1.74
TRAPPC3-204ENST00000373166 SERPINB2P05120 415 aa25.93■■□□□ 1.74
TRAPPC3-204ENST00000373166 AMER1Q5JTC6 1135 aaPredicted RBP25.92■■□□□ 1.74
TRAPPC3-204ENST00000373166 VSIG10Q8N0Z9 540 aa25.92■■□□□ 1.74
TRAPPC3-204ENST00000373166 TTLL6Q8N841 843 aa25.92■■□□□ 1.74
TRAPPC3-204ENST00000373166 ZBTB1Q9Y2K1 713 aa25.92■■□□□ 1.74
TRAPPC3-204ENST00000373166 ADAMTS7Q9UKP4 1686 aa25.91■■□□□ 1.74
TRAPPC3-204ENST00000373166 GLTPD2A6NH11 291 aa25.91■■□□□ 1.74
TRAPPC3-204ENST00000373166 VEGFAP15692 232 aaPredicted RBP25.91■■□□□ 1.74
TRAPPC3-204ENST00000373166 H0YIN7 160 aa25.9■■□□□ 1.74
TRAPPC3-204ENST00000373166 HMOX1P09601 288 aa25.9■■□□□ 1.74
TRAPPC3-204ENST00000373166 COL13A1Q5TAT6 717 aaPredicted RBP25.9■■□□□ 1.74
TRAPPC3-204ENST00000373166 C2CD5Q86YS7 1000 aa25.9■■□□□ 1.74
TRAPPC3-204ENST00000373166 BCL2L12Q9HB09 334 aa25.9■■□□□ 1.74
TRAPPC3-204ENST00000373166 SCN11AQ9UI33 1791 aa25.9■■□□□ 1.74
TRAPPC3-204ENST00000373166 TNRC6CQ9HCJ0 1690 aaKnown RBP25.88■■□□□ 1.73
TRAPPC3-204ENST00000373166 MRC1P22897 1456 aa25.88■■□□□ 1.73
TRAPPC3-204ENST00000373166 STARD3NLO95772 234 aa25.87■■□□□ 1.73
TRAPPC3-204ENST00000373166 CANXP27824 592 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-204ENST00000373166 MTHFSDQ2M296 383 aaKnown RBP25.87■■□□□ 1.73
TRAPPC3-204ENST00000373166 PER1O15534 1290 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC3-204ENST00000373166 PRELPP51888 382 aa25.86■■□□□ 1.73
TRAPPC3-204ENST00000373166 PCNTO95613 3336 aa25.85■■□□□ 1.73
TRAPPC3-204ENST00000373166 A0A087WZG4 1122 aa25.84■■□□□ 1.73
TRAPPC3-204ENST00000373166 SBF1O95248 1867 aa25.84■■□□□ 1.73
TRAPPC3-204ENST00000373166 BICDL1Q6ZP65 573 aa25.84■■□□□ 1.73
TRAPPC3-204ENST00000373166 TTC5Q8N0Z6 440 aa25.84■■□□□ 1.73
TRAPPC3-204ENST00000373166 NFKBIEO00221 500 aa25.83■■□□□ 1.73
TRAPPC3-204ENST00000373166 DIAPH1O60610 1272 aaKnown RBP25.83■■□□□ 1.73
TRAPPC3-204ENST00000373166 CC2D1BQ5T0F9 858 aaKnown RBP25.83■■□□□ 1.73
TRAPPC3-204ENST00000373166 NPC1L1Q9UHC9 1359 aa25.82■■□□□ 1.72
TRAPPC3-204ENST00000373166 EIF5P55010 431 aaKnown RBP25.82■■□□□ 1.72
TRAPPC3-204ENST00000373166 DPY19L2Q6NUT2 758 aa25.82■■□□□ 1.72
TRAPPC3-204ENST00000373166 PDZRN3Q9UPQ7 1066 aa25.82■■□□□ 1.72
TRAPPC3-204ENST00000373166 NRXN2Q9P2S2 1712 aa25.81■■□□□ 1.72
TRAPPC3-204ENST00000373166 CARMIL3Q8ND23 1372 aa25.81■■□□□ 1.72
TRAPPC3-204ENST00000373166 PDE6BP35913 854 aa25.8■■□□□ 1.72
TRAPPC3-204ENST00000373166 TNS4Q8IZW8 715 aa25.8■■□□□ 1.72
TRAPPC3-204ENST00000373166 ZNF622Q969S3 477 aaKnown RBP eCLIP25.8■■□□□ 1.72
TRAPPC3-204ENST00000373166 BRIP1Q9BX63 1249 aa25.8■■□□□ 1.72
TRAPPC3-204ENST00000373166 TEX13AQ9BXU3 409 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC3-204ENST00000373166 AFDNP55196 1824 aaKnown RBP25.79■■□□□ 1.72
TRAPPC3-204ENST00000373166 TBC1D9BQ66K14 1250 aa25.78■■□□□ 1.72
TRAPPC3-204ENST00000373166 TEFQ10587 303 aa25.77■■□□□ 1.72
TRAPPC3-204ENST00000373166 C21orf2O43822 256 aa25.76■■□□□ 1.71
TRAPPC3-204ENST00000373166 CAPN15O75808 1086 aa25.76■■□□□ 1.71
TRAPPC3-204ENST00000373166 ERFEQ4G0M1 354 aa25.76■■□□□ 1.71
TRAPPC3-204ENST00000373166 ZNF496Q96IT1 587 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC3-204ENST00000373166 ZNF330Q9Y3S2 320 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC3-204ENST00000373166 POTECB2RU33 542 aa25.75■■□□□ 1.71
TRAPPC3-204ENST00000373166 CNGB1Q14028 1251 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC3-204ENST00000373166 ZNF790Q6PG37 636 aa25.75■■□□□ 1.71
TRAPPC3-204ENST00000373166 NPM2Q86SE8 214 aaKnown RBP25.75■■□□□ 1.71
TRAPPC3-204ENST00000373166 ZNF219Q9P2Y4 722 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC3-204ENST00000373166 TBC1D2BQ9UPU7 963 aa25.75■■□□□ 1.71
TRAPPC3-204ENST00000373166 DLEC1Q9Y238 1755 aa25.74■■□□□ 1.71
TRAPPC3-204ENST00000373166 HEG1Q9ULI3 1381 aa25.74■■□□□ 1.71
TRAPPC3-204ENST00000373166 HSPA1AP0DMV8 641 aaKnown RBP25.74■■□□□ 1.71
TRAPPC3-204ENST00000373166 HSPA1BP0DMV9 641 aaKnown RBP25.74■■□□□ 1.71
TRAPPC3-204ENST00000373166 IL6STP40189 918 aaPredicted RBP25.74■■□□□ 1.71
TRAPPC3-204ENST00000373166 PRR5LQ6MZQ0 368 aa25.74■■□□□ 1.71
TRAPPC3-204ENST00000373166 GNAT3A8MTJ3 354 aa25.73■■□□□ 1.71
TRAPPC3-204ENST00000373166 IL17REQ8NFR9 667 aa25.73■■□□□ 1.71
TRAPPC3-204ENST00000373166 GAS2L2Q8NHY3 880 aa25.73■■□□□ 1.71
TRAPPC3-204ENST00000373166 NPHP1O15259 732 aa25.72■■□□□ 1.71
TRAPPC3-204ENST00000373166 CCDC24Q8N4L8 307 aa25.72■■□□□ 1.71
TRAPPC3-204ENST00000373166 SETDB2Q96T68 719 aa25.72■■□□□ 1.71
TRAPPC3-204ENST00000373166 LTBP3Q9NS15 1303 aa25.7■■□□□ 1.71
TRAPPC3-204ENST00000373166 U2SURPO15042 1029 aaKnown RBP25.7■■□□□ 1.7
TRAPPC3-204ENST00000373166 CNBD1Q8NA66 436 aa25.7■■□□□ 1.7
TRAPPC3-204ENST00000373166 CNKSR1Q969H4 720 aa25.7■■□□□ 1.7
TRAPPC3-204ENST00000373166 FMNL2Q96PY5 1086 aa25.7■■□□□ 1.7
TRAPPC3-204ENST00000373166 TAOK3Q9H2K8 898 aa25.7■■□□□ 1.7
TRAPPC3-204ENST00000373166 UBR2Q8IWV8 1755 aa25.69■■□□□ 1.7
TRAPPC3-204ENST00000373166 TIAM2Q8IVF5 1701 aa25.68■■□□□ 1.7
TRAPPC3-204ENST00000373166 A1BGP04217 495 aa25.68■■□□□ 1.7
TRAPPC3-204ENST00000373166 ST5P78524 1137 aa25.68■■□□□ 1.7
TRAPPC3-204ENST00000373166 SOGA3Q5TF21 947 aa25.68■■□□□ 1.7
TRAPPC3-204ENST00000373166 STYK1Q6J9G0 422 aa25.68■■□□□ 1.7
TRAPPC3-204ENST00000373166 CHADLQ6NUI6 762 aa25.68■■□□□ 1.7
TRAPPC3-204ENST00000373166 CAMTA2O94983 1202 aa25.66■■□□□ 1.7
TRAPPC3-204ENST00000373166 CREBZFQ9NS37 354 aa25.66■■□□□ 1.7
TRAPPC3-204ENST00000373166 DDNO94850 711 aaPredicted RBP25.65■■□□□ 1.7
TRAPPC3-204ENST00000373166 SRGNP10124 158 aa25.65■■□□□ 1.7
TRAPPC3-204ENST00000373166 PRPF40BQ6NWY9 871 aaKnown RBP25.65■■□□□ 1.7
TRAPPC3-204ENST00000373166 MASTLQ96GX5 879 aa25.65■■□□□ 1.7
TRAPPC3-204ENST00000373166 DZIP3Q86Y13 1208 aaKnown RBP25.64■■□□□ 1.7
TRAPPC3-204ENST00000373166 BTBD11A6QL63 1104 aa25.63■■□□□ 1.69
TRAPPC3-204ENST00000373166 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
TRAPPC3-204ENST00000373166 SCN7AQ01118 1682 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms